Loss of the flagellum happened only once in the fungal lineage: phylogenetic structure of kingdom Fungi inferred from RNA polymerase II subunit genes

scientific article

Loss of the flagellum happened only once in the fungal lineage: phylogenetic structure of kingdom Fungi inferred from RNA polymerase II subunit genes is …
instance of (P31):
scholarly articleQ13442814

External links are
P6179Dimensions Publication ID1003716298
P356DOI10.1186/1471-2148-6-74
P932PMC publication ID1599754
P698PubMed publication ID17010206
P5875ResearchGate publication ID6785022

P2093author name stringYajuan J Liu
Benjamin D Hall
Matthew C Hodson
P2860cites workGenome sequence and gene compaction of the eukaryote parasite Encephalitozoon cuniculiQ22122366
Lichen-Like Symbiosis 600 Million Years AgoQ22299355
Model selection and model averaging in phylogenetics: advantages of akaike information criterion and bayesian approaches over likelihood ratio testsQ24286948
A comprehensive comparison of multiple sequence alignment programsQ24548825
MODELTEST: testing the model of DNA substitutionQ26778437
TREE-PUZZLE: maximum likelihood phylogenetic analysis using quartets and parallel computingQ27860512
MRBAYES: Bayesian inference of phylogenetic treesQ27860538
The rapid generation of mutation data matrices from protein sequencesQ27860880
Evidence from beta-tubulin phylogeny that microsporidia evolved from within the fungiQ28144396
Molecular evidence for the early colonization of land by fungi and plantsQ28212210
Improving phylogenetic inference of mushrooms with RPB1 and RPB2 nucleotide sequences (Inocybe; Agaricales)Q28237255
Assembling the fungal tree of life: progress, classification, and evolution of subcellular traitsQ28239857
Amitochondriate amoebae and the evolution of DNA-dependent RNA polymerase IIQ28776510
Microsporidia are related to Fungi: evidence from the largest subunit of RNA polymerase II and other proteinsQ31932082
Microsporidia: accumulating molecular evidence that a group of amitochondriate and suspectedly primitive eukaryotes are just curious fungiQ33892754
Molecular phylogeny of parasitic zygomycota (Dimargaritales, zoopagales) based on nuclear small subunit ribosomal DNA sequencesQ33913769
Geosiphon pyriforme, a fungus forming endocytobiosis with Nostoc (cyanobacteria), is an ancestral member of the Glomales: evidence by SSU rRNA analysisQ34062743
Molecular phylogeny of Zygomycota based on EF-1alpha and RPB1 sequences: limitations and utility of alternative markers to rDNA.Q34288876
Body plan evolution of ascomycetes, as inferred from an RNA polymerase II phylogenyQ34311811
The full-length phylogenetic tree from 1551 ribosomal sequences of chitinous fungi, FungiQ35553154
A mitochondrial Hsp70 orthologue in Vairimorpha necatrix: molecular evidence that microsporidia once contained mitochondriaQ36893145
Evolution of monoblepharidalean fungi based on complete mitochondrial genome sequencesQ39744718
Ancestral lineages of arbuscular mycorrhizal fungi (Glomales).Q41719949
Evolutionary relationships within the fungi: analyses of nuclear small subunit rRNA sequencesQ42452884
Evidence for loss of mitochondria in Microsporidia from a mitochondrial-type HSP70 in Nosema locustae.Q42661477
Ribosomal RNA sequence shows Pneumocystis carinii to be a member of the fungiQ43515292
Probability distribution of molecular evolutionary trees: a new method of phylogenetic inferenceQ44580766
Rate and mode differences between nuclear and mitochondrial small-subunit rRNA genes in mushroomsQ44743921
The serine repeat antigen (SERA) gene family phylogeny in Plasmodium: the impact of GC content and reconciliation of gene and species treesQ45015235
Molecular evolution of the fungi: relationship of the Basidiomycetes, Ascomycetes, and ChytridiomycetesQ45961423
Protein phylogeny of translation elongation factor EF-1 alpha suggests microsporidians are extremely ancient eukaryotesQ47181399
Ribosomal RNA sequence suggests microsporidia are extremely ancient eukaryotesQ47399583
Evolution. Terrestrial life--fungal from the start?Q47658923
Complete nucleotide sequences of the genes encoding translation elongation factors 1 alpha and 2 from a microsporidian parasite, Glugea plecoglossi: implications for the deepest branching of eukaryotesQ47813974
Phylogenetic relationships among ascomycetes: evidence from an RNA polymerse II subunitQ47899377
Phylogenetic analysis of the TATA box binding protein (TBP) gene from Nosema locustae: evidence for a microsporidia-fungi relationship and spliceosomal intron lossQ47909523
Alpha-tubulin from early-diverging eukaryotic lineages and the evolution of the tubulin familyQ48057474
Phylogenetic analysis of beta-tubulin sequences from amitochondrial protozoaQ48065215
Congruent evidence from alpha-tubulin and beta-tubulin gene phylogenies for a zygomycete origin of microsporidiaQ48251993
Hyaloraphidium curvatum: a linear mitochondrial genome, tRNA editing, and an evolutionary link to lower fungiQ48316822
Phylogenetic analysis of the complete genome sequence of Encephalitozoon cuniculi supports the fungal origin of microsporidia and reveals a high frequency of fast-evolving genes.Q51982383
Extensive Fungal Diversity in Plant RootsQ56989683
Relationships of the Insect-Pathogenic Order Entomophthorales (Zygomycota, Fungi) Based on Phylogenetic Analyses of Nuclear Small Subunit Ribosomal DNA Sequences (SSU rDNA)Q57046946
No sex please, we're fungiQ59076418
The fungal mitochondrial genome project: evolution of fungal mitochondrial genomes and their gene expressionQ73363154
How good are deep phylogenetic trees?Q77892032
Microsporidian molecular phylogeny: the fungal connectionQ95802797
P433issue1
P407language of work or nameEnglishQ1860
P921main subjectphylogeneticsQ171184
P304page(s)74
P577publication date2006-01-01
P1433published inBMC Evolutionary BiologyQ13418959
P1476titleLoss of the flagellum happened only once in the fungal lineage: phylogenetic structure of kingdom Fungi inferred from RNA polymerase II subunit genes
P478volume6

Reverse relations

cites work (P2860)
Q38684396A Survey of the Gene Repertoire of Gigaspora rosea Unravels Conserved Features among Glomeromycota for Obligate Biotrophy.
Q21283840A fungal phylogeny based on 82 complete genomes using the composition vector method
Q95660507A mechanistic explanation of the transition to simple multicellularity in fungi
Q34074978A multigene phylogeny of Olpidium and its implications for early fungal evolution
Q28109645A phylum-level phylogenetic classification of zygomycete fungi based on genome-scale data
Q46884968An eight-gene molecular phylogeny of the Kickxellomycotina, including the first phylogenetic placement of Asellariales
Q38580369Anaerobic Fungi and Their Potential for Biogas Production.
Q54646833Blastocladiomycota
Q34473588Cytology and molecular phylogenetics of Monoblepharidomycetes provide evidence for multiple independent origins of the hyphal habit in the Fungi
Q57010739DNA-based detection and identification of Glomeromycota: the virtual taxonomy of environmental sequences
Q28727109Decay of genes encoding the oomycete flagellar proteome in the downy mildew Hyaloperonospora arabidopsidis
Q46762616Development of a single-nucleotide polymorphism (SNP) assay for genotyping of Pandora neoaphidis
Q61443063Dinoflagellate nucleus contains an extensive endomembrane network, the nuclear net
Q118163381Ecological speciation of Japanese hedgehog mushroom: Hydnum subalpinum sp. nov. is distinguished from its sister species H. repando-orientale by means of integrative taxonomy
Q21089643Entorrhizomycota: A New Fungal Phylum Reveals New Perspectives on the Evolution of Fungi
Q33348170Evolution of SET-domain protein families in the unicellular and multicellular Ascomycota fungi
Q35184142Evolutionary histories of soil fungi are reflected in their large-scale biogeography
Q24650682Fungal diversity in deep-sea hydrothermal ecosystems
Q90301884Fungal evolution: major ecological adaptations and evolutionary transitions
Q38613280Fungal lifestyle reflected in serine protease repertoire
Q31165946Genomic Data Quality Impacts Automated Detection of Lateral Gene Transfer in Fungi
Q21563342Genomic analysis of the basal lineage fungus Rhizopus oryzae reveals a whole-genome duplication
Q30762864Incipient loss of flagella in the genus Geolegnia: the emergence of a new clade within Leptolegnia?
Q28740823Microbial Pathogens in the Fungal Kingdom
Q37738374Molecular evolution and functional divergence of tubulin superfamily in the fungal tree of life
Q47244350Mucoralean fungi for sustainable production of bioethanol and biologically active molecules
Q28601447On the Evolutionary History of Uleiella chilensis, a Smut Fungus Parasite of Araucaria araucana in South America: Uleiellales ord. nov. in Ustilaginomycetes
Q34339298Overview of 75 years of Smittium research, establishing a new genus for Smittium culisetae, and prospects for future revisions of the 'Smittium' Claire.
Q35610249Phylogenetic and preliminary phenotypic analysis of yeast PAQR receptors: potential antifungal targets
Q37643638Phylogenetic relationships matter: antifungal susceptibility among clinically relevant yeasts
Q21093408Phylogenomic analyses predict sistergroup relationship of nucleariids and fungi and paraphyly of zygomycetes with significant support
Q34287990Phylogenomics supports microsporidia as the earliest diverging clade of sequenced fungi
Q35191801Rab11 function in Trypanosoma brucei: identification of conserved and novel interaction partners
Q39705218Reconstructing the fungal tree of life using phylogenomics and a preliminary investigation of the distribution of yeast prion-like proteins in the fungal kingdom.
Q34397362Single nucleus genome sequencing reveals high similarity among nuclei of an endomycorrhizal fungus
Q35746962Taxonomy of fungi causing mucormycosis and entomophthoramycosis (zygomycosis) and nomenclature of the disease: molecular mycologic perspectives
Q57055776The Faces of Fungi database: fungal names linked with morphology, phylogeny and human impacts
Q28742918The dawn of symbiosis between plants and fungi
Q26852054The evolution of land plant cilia
Q28750021The fungi
Q48052335The mitochondrial genome of the arbuscular mycorrhizal fungus Gigaspora margarita reveals two unsuspected trans-splicing events of group I introns
Q44675025Using a five-gene phylogeny to test morphology-based hypotheses of Smittium and allies, endosymbiotic gut fungi (Harpellales) associated with arthropods
Q57806465What the Genomics of Arbuscular Mycorrhizal Symbiosis Teaches Us about Root Development
Q46534990Wider than Thought Phylogenetic Occurrence of Apicortin, A Characteristic Protein of Apicomplexan Parasites
Q34716936Widespread occurrence and phylogenetic placement of a soil clone group adds a prominent new branch to the fungal tree of life

Search more.