Ongoing phenotypic and genomic changes in experimental coevolution of RNA bacteriophage Qβ and Escherichia coli

scientific article

Ongoing phenotypic and genomic changes in experimental coevolution of RNA bacteriophage Qβ and Escherichia coli is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.1371/JOURNAL.PGEN.1002188
P932PMC publication ID3150450
P698PubMed publication ID21829387
P5875ResearchGate publication ID51559700

P2093author name stringTetsuya Yomo
Akiko Kashiwagi
P2860cites workDNA sequencing with chain-terminating inhibitorsQ22066207
Genome evolution and adaptation in a long-term experiment with Escherichia coliQ22122199
Rates of spontaneous mutationQ24548000
Rates of spontaneous mutation among RNA virusesQ24563020
Multiple reciprocal adaptations and rapid genetic change upon experimental coevolution of an animal host and its microbial parasiteQ24623000
Experimental examination of bacteriophage latent-period evolution as a response to bacterial availabilityQ24632140
Mapping short DNA sequencing reads and calling variants using mapping quality scoresQ24644612
Antagonistic coevolution between a bacterium and a bacteriophageQ24670125
Arms races between and within speciesQ28237790
Epidemiology and genetics in the coevolution of parasites and hostsQ28261345
Testing optimality with experimental evolution: lysis time in a bacteriophageQ28307788
The fitness effects of random mutations in single-stranded DNA and RNA bacteriophagesQ28471969
Rates of evolutionary change in viruses: patterns and determinantsQ29616174
RNA virus mutations and fitness for survivalQ29619434
Interaction between the F plasmid TraA (F-pilin) and TraQ proteinsQ31431680
Host-parasite 'Red Queen' dynamics archived in pond sedimentQ33305626
Explaining microbial population genomics through phage predation.Q51647339
Genetic basis of infectivity evolution in a bacteriophage.Q53451276
The CsdA cysteine desulphurase promotes Fe/S biogenesis by recruiting Suf components and participates to a new sulphur transfer pathway by recruiting CsdL (ex-YgdL), a ubiquitin-modifying-like protein.Q54392495
Virulence evolution in a virus obeys a trade-off.Q55386268
Linking genetic change to community evolution: insights from studies of bacteria and bacteriophageQ56602297
cis-acting elements within an RNA coliphage genome: fold as you please, but fold you must!!Q56903410
Coevolution of Escherichia coli and bacteriophages in chemostat cultureQ69904732
'Small worlds' and the evolution of virulence: infection occurs locally and at a distanceQ73234100
A protein antibiotic in the phage Qbeta virion: diversity in lysis targetsQ74087194
MyxomatosisQ79231325
Viral and microbial community dynamics in four aquatic environments.Q33530622
Biological and biomedical implications of the co-evolution of pathogens and their hostsQ34161540
Transition from positive to neutral in mutation fixation along with continuing rising fitness in thermal adaptive evolution.Q34220343
Breaking free: "protein antibiotics" and phage lysisQ35000801
The population genetics and evolutionary epidemiology of RNA virusesQ35697519
Synthesis of F pilinQ35912193
A long-range pseudoknot in Qbeta RNA is essential for replicationQ38317824
Comparison of proteins involved in pilus synthesis and mating pair stabilization from the related plasmids F and R100-1: insights into the mechanism of conjugation.Q39497030
Improved oligonucleotide site-directed mutagenesis using M13 vectors.Q40470764
“Pseudolysogenization” by RNA Phage QβQ41159740
The lysis function of RNA bacteriophage Qbeta is mediated by the maturation (A2) proteinQ41461006
Antagonistic coevolution accelerates molecular evolutionQ41813977
Local interactions select for lower pathogen infectivityQ42034277
Tablet--next generation sequence assembly visualizationQ42144683
A long-range interaction in Qbeta RNA that bridges the thousand nucleotides between the M-site and the 3' end is required for replicationQ43206279
MapView: visualization of short reads alignment on a desktop computerQ43849434
Quantitative analysis of the bacteriophage Qbeta infection cycleQ47349006
P275copyright licenseCreative Commons Attribution 4.0 InternationalQ20007257
P6216copyright statuscopyrightedQ50423863
P433issue8
P407language of work or nameEnglishQ1860
P921main subjectEscherichia coliQ25419
bacteriophageQ165028
co-evolutionQ208841
P304page(s)e1002188
P577publication date2011-08-01
P1433published inPLOS GeneticsQ1893441
P1476titleOngoing phenotypic and genomic changes in experimental coevolution of RNA bacteriophage Qβ and Escherichia coli
P478volume7

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