Biosynthesis of wybutosine, a hyper-modified nucleoside in eukaryotic phenylalanine tRNA

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Biosynthesis of wybutosine, a hyper-modified nucleoside in eukaryotic phenylalanine tRNA is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.1038/SJ.EMBOJ.7601105
P3181OpenCitations bibliographic resource ID2283670
P932PMC publication ID1462984
P698PubMed publication ID16642040
P5875ResearchGate publication ID7139184

P50authorYohei KirinoQ42764376
P2093author name stringYoshiho Ikeuchi
Tsutomu Suzuki
Akiko Noma
P2860cites workThe CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis toolsQ24248165
Purine bases at position 37 of tRNA stabilize codon-anticodon interaction in the ribosomal A site by stacking and Mg2+-dependent interactionsQ24540241
Carboxyl methylation of the phosphoprotein phosphatase 2A catalytic subunit promotes its functional association with regulatory subunits in vivoQ24598333
Radical SAM, a novel protein superfamily linking unresolved steps in familiar biosynthetic pathways with radical mechanisms: functional characterization using new analysis and information visualization methodsQ24616026
CYGD: the Comprehensive Yeast Genome DatabaseQ24794671
Structure of protein phosphatase methyltransferase 1 (PPM1), a leucine carboxyl methyltransferase involved in the regulation of protein phosphatase 2A activityQ27642733
Global analysis of protein localization in budding yeastQ27653962
The proteome of Saccharomyces cerevisiae mitochondriaQ27653963
Possibility of cytoplasmic pre-tRNA splicing: the yeast tRNA splicing endonuclease mainly localizes on the mitochondriaQ27932795
A primordial tRNA modification required for the evolution of life?Q27933511
Yeast Nfs1p is involved in thio-modification of both mitochondrial and cytoplasmic tRNAs.Q27935952
A novel methyltransferase required for the formation of the hypermodified nucleoside wybutosine in eucaryotic tRNA.Q27937798
S-Adenosylmethionine-dependent methylation in Saccharomyces cerevisiae. Identification of a novel protein arginine methyltransferaseQ27940350
Carboxymethylation of the PP2A catalytic subunit in Saccharomyces cerevisiae is required for efficient interaction with the B-type subunits Cdc55p and Rts1pQ28344875
Subcellular localization of the yeast proteomeQ29617265
Incorporation of lysine into Y base of phenylalanine tRNA in Vero cellsQ30620995
Specific correlation between the wobble modification deficiency in mutant tRNAs and the clinical features of a human mitochondrial diseaseQ33821565
An RNA-modifying enzyme that governs both the codon and amino acid specificities of isoleucine tRNA.Q34267562
Isolation and characterization of the human tRNA-(N1G37) methyltransferase (TRM5) and comparison to the Escherichia coli TrmD proteinQ34332854
Adenosylmethionine as a source of 5'-deoxyadenosyl radicalsQ34386228
A unique RNA Fold in the RumA-RNA-cofactor ternary complex contributes to substrate selectivity and enzymatic functionQ34402667
Radical mechanisms of S-adenosylmethionine-dependent enzymesQ34414518
Changes of post-transcriptional modification of wye base in tumor-specific tRNAPheQ35716891
The nucleotide sequence of phenylalanine tRNA2of Drosophila melanogaster: four isoacceptors with one basic sequenceQ35758402
Human mitochondrial diseases associated with tRNA wobble modification deficiencyQ36667476
The RNA Modification Database: 1999 updateQ38548527
Wobble modification differences and subcellular localization of tRNAs in Leishmania tarentolae: implication for tRNA sorting mechanismQ39699014
Enzymatic conversion of guanosine 3' adjacent to the anticodon of yeast tRNAPhe to N1-methylguanosine and the wye nucleoside: dependence on the anticodon sequence.Q41333790
Chromatographic analysis of the aminoacyl-tRNAs which are required for translation of codons at and around the ribosomal frameshift sites of HIV, HTLV-1, and BLV.Q41760078
Primary structure of Bombyx mori posterior silkgland tRNAPheQ42077794
The amino acid sequence of a flavodoxin from the eukaryotic red alga Chondrus crispusQ42094258
Protein phosphatase methyltransferase 1 (Ppm1p) is the sole activity responsible for modification of the major forms of protein phosphatase 2A in yeastQ43791743
Structures of two new "minimalist" modified nucleosides from archaeal tRNA.Q44780356
Tandem mass spectrometry for structure assignments of wye nucleosides from transfer RNA.Q44813582
MiaB protein is a bifunctional radical-S-adenosylmethionine enzyme involved in thiolation and methylation of tRNA.Q45038651
Biosynthesis of the nucleoside y in yeast tRNAPhe : Incorporation of the 3-amino-3-carboxypropyl-group from methionineQ45063189
tRNA actively shuttles between the nucleus and cytosol in yeastQ46499764
Mechanistic insights into sulfur relay by multiple sulfur mediators involved in thiouridine biosynthesis at tRNA wobble positionsQ46875110
Biosynthetic studies of the Y base in yeast phenylalanine tRNA. Incorporation of guanineQ53685008
Origin of the nucleoside Y in yeast tRNAPheQ53705994
Structure of wye (Yt base) and wyosine (Yt) from Torulopsis utilis phenylalanine transfer ribonucleic acidQ67764915
Isolation and structure determination of the fluorescent base from bovine liver phenylalanine transfer ribonucleic acidQ69226994
A Specific Modification Next to the Anticodon of Phenylalanine Transfer Ribonucleic AcidQ72151495
Transfer RNA modification status influences retroviral ribosomal frameshiftingQ74525587
P433issue10
P407language of work or nameEnglishQ1860
P921main subjectwybutosineQ1310878
TRNA(Phe) (4-demethylwyosine(37)-C(7)) aminocarboxypropyltransferase YML005WQ27547770
Putative tRNA 4-demethylwyosine synthase YPL207WQ27551170
TRNA methyltransferase PPM2 YOL141WQ27551299
TRNA methyltransferase TYW3 YGL050WQ27551493
P304page(s)2142-54
P577publication date2006-05-17
P1433published inThe EMBO JournalQ1278554
P1476titleBiosynthesis of wybutosine, a hyper-modified nucleoside in eukaryotic phenylalanine tRNA
P478volume25