The Phycodnaviridae: the story of how tiny giants rule the world

scientific article

The Phycodnaviridae: the story of how tiny giants rule the world is …
instance of (P31):
scholarly articleQ13442814
review articleQ7318358

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P356DOI10.1007/978-3-540-68618-7_1
P3181OpenCitations bibliographic resource ID847465
P932PMC publication ID2908299
P698PubMed publication ID19216434
P5875ResearchGate publication ID227266242

P2093author name stringJ L Van Etten
M J Allen
W H Wilson
P2860cites workA Hypothesis for DNA Viruses as the Origin of Eukaryotic Replication ProteinsQ22065438
The tiny eukaryote Ostreococcus provides genomic insights into the paradox of plankton speciationQ22066332
Genome analysis of the smallest free-living eukaryote Ostreococcus tauri unveils many unique featuresQ22066363
Common origin of four diverse families of large eukaryotic DNA virusesQ24529306
Ornithine decarboxylase encoded by chlorella virus PBCV-1.Q42684704
Chlorella virus PBCV-1 encodes functional glutamine: fructose-6-phosphate amidotransferase and UDP-glucose dehydrogenase enzymesQ42685289
Chitin synthesis in chlorovirus CVK2-infected chlorella cellsQ42687872
The structure of icosahedral cytoplasmic deoxyribovirusesQ42994700
Locus-specific gene expression pattern suggests a unique propagation strategy for a giant algal virusQ43154877
Topoisomerase II from Chlorella virus PBCV-1 has an exceptionally high DNA cleavage activityQ43589179
Molecular and genetic evidence for a virus-encoded glycosyltransferase involved in protein glycosylationQ43662052
Persistent virus integration into the genome of its algal host, Ectocarpus siliculosus (Phaeophyceae).Q43785789
Chlorovirus: a genus of Phycodnaviridae that infects certain chlorella-like green algae.Q43788741
Chlorella viruses contain linear nonpermuted double-stranded DNA genomes with covalently closed hairpin endsQ44127465
Use of microarrays to assess viral diversity: from genotype to phenotype.Q44358552
Paramecium bursaria chlorella virus-1 encodes an unusual arginine decarboxylase that is a close homolog of eukaryotic ornithine decarboxylasesQ44931302
Functional analysis of FAD-dependent thymidylate synthase ThyX from Paramecium bursaria Chlorella virus-1.Q45096253
Cloning of Nt.CviQII nicking endonuclease and its cognate methyltransferase: M.CviQII methylates AG sequences.Q45129962
Characterization of a repetitive DNA element in a brown algal virusQ45265557
DNA synthesis in a Chlorella-like alga following infection with the virus PBCV-1.Q45393031
Growth cycle of a virus, PBCV-1, that infects Chlorella-like algaeQ45393119
Isolation and characterization of a virus from the intracellular green alga symbiotic with Hydra viridis.Q45393271
Virus infection of culturable chlorella-like algae and dlevelopment of a plaque assayQ45400435
The vaccinia virus kelch-like protein C2L affects calcium-independent adhesion to the extracellular matrix and inflammation in a murine intradermal modelQ45722229
Topoisomerase II from Chlorella virus PBCV-1. Characterization of the smallest known type II topoisomeraseQ45744067
Hyaluronan synthesis in virus PBCV-1-infected chlorella-like green algaeQ45749980
Chlorella virus NY-2A encodes at least 12 DNA endonuclease/methyltransferase genesQ45758106
Large deletions in the genome of Chlorella virus CVK1.Q45772218
Genome structure of a virus infecting the marine brown alga Ectocarpus siliculosusQ45773613
Characterization of the terminal inverted repeats and their neighboring tandem repeats in the Chlorella CVK1 virus genomeQ45777171
Hairpin loop structure at the termini of the chlorella virus PBCV-1 genome.Q45781288
Infection of a Chlorella-like alga with the virus, PBCV-1: ultrastructural studiesQ45795523
Assembly site of the virus PBCV-1 in a Chlorella-like green alga: ultrastructural studiesQ45829597
Viral impacts on total abundance and clonal composition of the harmful bloom-forming phytoplankton Heterosigma akashiwoQ24550327
A single species, Micromonas pusilla (Prasinophyceae), dominates the eukaryotic picoplankton in the Western English ChannelQ24564320
A site-specific single strand endonuclease activity induced by NYs-1 virus infection of a Chlorella-like green algaQ24594443
The 1.2-megabase genome sequence of MimivirusQ26794965
The structure and evolution of the major capsid protein of a large, lipid-containing DNA virusQ27639903
A dimeric viral SET domain methyltransferase specific to Lys27 of histone H3Q27640431
Analysis of the DNA joining repertoire of Chlorella virus DNA ligase and a new crystal structure of the ligase-adenylate intermediateQ27641878
X-ray crystallography reveals a large conformational change during guanyl transfer by mRNA capping enzymesQ27737905
Structure of a complex between a cap analogue and mRNA guanylyl transferase demonstrates the structural chemistry of RNA cappingQ27748853
Giant viruses infecting algaeQ28146171
Unusual Life Style of Giant Chlorella VirusesQ28184408
An alternative flavin-dependent mechanism for thymidylate synthesisQ28218967
Marine cyanophages and lightQ28274187
Evolutionary genomics of nucleo-cytoplasmic large DNA virusesQ28298692
Assessing the dynamics and ecology of marine picophytoplankton: The importance of the eukaryotic componentQ29391976
The deep roots of eukaryotesQ29616066
Isolation and phylogenetic analysis of novel viruses infecting the phytoplankton Phaeocystis globosa (Prymnesiophyceae).Q30399650
Chlorella virus MT325 encodes water and potassium channels that interact synergistically.Q30477045
Climate change. Carbonate mysteriesQ30695597
Coccolithovirus (Phycodnaviridae): characterisation of a new large dsDNA algal virus that infects Emiliana huxleyiQ30718577
Study of genetic diversity of eukaryotic picoplankton in different oceanic regions by small-subunit rRNA gene cloning and sequencingQ30993845
Preliminary characterisation of repeat families in the genome of EhV-86, a giant algal virus that infects the marine microalga Emiliania huxleyiQ31008096
Viral control of phytoplankton populations--a reviewQ31059574
Molecular diversity among marine picophytoplankton as revealed by psbA analyses.Q33186077
vAL-1, a novel polysaccharide lyase encoded by chlorovirus CVK2.Q33198225
Growth characteristics of Heterosigma akashiwo virus and its possible use as a microbiological agent for red tide control.Q33853491
Finding families for genomic ORFansQ33875139
Algal viruses with distinct intraspecies host specificities include identical intein elementsQ33884802
Structure and assembly of large lipid-containing dsDNA virusesQ33888561
Oceanic 18S rDNA sequences from picoplankton reveal unsuspected eukaryotic diversityQ33935372
Sequence analysis of marine virus communities reveals that groups of related algal viruses are widely distributed in natureQ34050973
The origins and ongoing evolution of virusesQ34106581
Isolation and characterization of two viruses with large genome size infecting Chrysochromulina ericina (Prymnesiophyceae) and Pyramimonas orientalis (Prasinophyceae).Q34117381
Structure of small virusesQ34238550
Protein glycosylation and myristylation in Chlorella virus PBCV-1 and its antigenic variantsQ36736330
Ability of viral topoisomerase II to discern the handedness of supercoiled DNA: bimodal recognition of DNA geometry by type II enzymesQ36839647
Restriction endonuclease activity induced by PBCV-1 virus infection of a Chlorella-like green algaQ36913176
Viruses and viruslike particles of eukaryotic algaeQ36930456
Small potassium ion channel proteins encoded by chlorella virusesQ37681148
The molecular pathogenesis of poxviruses.Q37898707
The genomes of sheeppox and goatpox viruses.Q39537288
Amplification of DNA polymerase gene fragments from viruses infecting microalgaeQ39797310
Self-splicing group I introns in eukaryotic virusesQ40400428
Effects of deletions of kelch-like genes on cowpox virus biological propertiesQ40436338
Cloning of CviPII nicking and modification system from chlorella virus NYs-1 and application of Nt.CviPII in random DNA amplificationQ40637190
Genetic variation of African swine fever virus: variable regions near the ends of the viral DNA.Q40769568
Genetic variation of chlorella viruses: variable regions localized on the CVK2 genomic DNA.Q42594714
Paramecium bursaria Chlorella virus 1 encodes two enzymes involved in the biosynthesis of GDP-L-fucose and GDP-D-rhamnose.Q42596533
Evidence for 4-hydroxyproline in viral proteins. Characterization of a viral prolyl 4-hydroxylase and its peptide substratesQ42606869
Transfer RNA genes and their significance to codon usage in the Pseudomonas aeruginosa lamboid bacteriophage D3.Q42612076
Chlorella virus PBCV-1 encodes a functional homospermidine synthaseQ42612810
A potassium channel protein encoded by chlorella virus PBCV-1.Q42620308
Large deletions in antigenic variants of the chlorella virus PBCV-1.Q42625631
The termini of the chlorella virus PBCV-1 genome are identical 2.2-kbp inverted repeatsQ42626589
The complete DNA sequence of the Ectocarpus siliculosus Virus EsV-1 genomeQ42656902
Analysis of 74 kb of DNA located at the right end of the 330-kb chlorella virus PBCV-1 genomeQ42666689
Hyaluronan synthase of chlorella virus PBCV-1.Q42668483
Group I introns found in Chlorella viruses: biological implicationsQ42674468
Discovery of a dsRNA virus infecting the marine photosynthetic protist Micromonas pusilla.Q34300578
Does common architecture reveal a viral lineage spanning all three domains of life?Q34372609
Expression and characterization of an RNA capping enzyme encoded by Chlorella virus PBCV-1Q34395835
Genetic Diversity of Algal Viruses Which Lyse the Photosynthetic Picoflagellate Micromonas pusilla (Prasinophyceae)Q34422901
The marine algal virus PpV01 has an icosahedral capsid with T=219 quasisymmetry.Q34430969
Potassium ion channels of Chlorella viruses cause rapid depolarization of host cells during infection.Q34434795
Complete genome sequence and lytic phase transcription profile of a CoccolithovirusQ34442899
Genome comparison of two CoccolithovirusesQ34504230
High abundance of viruses found in aquatic environments.Q34538292
Origins and evolution of spliceosomal intronsQ34580514
IL-3A virus infection of a Chlorella-like green alga induces a DNA restriction endonuclease with novel sequence specificityQ34697581
Evolution of viral structureQ34776741
Phycodnaviridae--large DNA algal virusesQ34786435
Virus succession observed during an Emiliania huxleyi bloomQ34987589
Virion-associated restriction endonucleases of chloroviruses.Q35023957
Genetic diversity in marine algal virus communities as revealed by sequence analysis of DNA polymerase genes.Q35192536
Possible function for virus encoded K+ channel Kcv in the replication of chlorella virus PBCV-1.Q35217943
Structural analyses of Phycodnaviridae and IridoviridaeQ35596636
Sequence and annotation of the 314-kb MT325 and the 321-kb FR483 viruses that infect Chlorella PbiQ35839065
Sequence and annotation of the 369-kb NY-2A and the 345-kb AR158 viruses that infect Chlorella NC64A.Q35865752
Characterization of an ATP-dependent DNA ligase encoded by Chlorella virus PBCV-1Q35877967
Glycosyltransferases encoded by virusesQ35901720
Chloroviruses encode a bifunctional dCMP-dCTP deaminase that produces two key intermediates in dTTP formationQ35914545
Chlorella virusesQ35956647
Chlorella viruses contain genes encoding a complete polyamine biosynthetic pathwayQ35982907
Sequence and annotation of the 288-kb ATCV-1 virus that infects an endosymbiotic chlorella strain of the heliozoon Acanthocystis turfaceaQ36059556
DNA methylation of viruses infecting a eukaryotic Chlorella-like green algaQ36142657
Evidence for virus-encoded glycosylation specificityQ36266811
Microbial synthesis of hyaluronan and chitin: New approachesQ36289911
Viruses of symbiotic Chlorella-like algae isolated from Paramecium bursaria and Hydra viridisQ36300497
Isolation and characterization of a novel single-stranded RNA virus infecting the bloom-forming diatom Rhizosolenia setigeraQ36372276
Phycodnaviruses: a peek at genetic diversityQ36413822
An Electron Microscope Study of the Structure of Sericesthis Iridescent VirusQ36575433
The coccolithovirus microarray: an array of usesQ36621085
Replication of the algal virus PBCV-1 in UV-irradiated ChlorellaQ45830681
Properties of the Chlorella receptor for the virus PBCV-1.Q45832214
Infection of a Chlorella-like alga with the virus PBCV-1: transcriptional studiesQ45848526
Differential role of NADP+ and NADPH in the activity and structure of GDP-D-mannose 4,6-dehydratase from two chlorella viruses.Q46921021
Long distance interactions within the potassium channel pore are revealed by molecular diversity of viral proteinsQ47709987
Intron conservation in a UV-specific DNA repair gene encoded by chlorella virusesQ47888387
Two types of deletions in orthopoxvirus genomesQ48075345
Isolation and characterization of a new type of chlorovirus that infects an endosymbiotic Chlorella strain of the heliozoon Acanthocystis turfaceaQ48119495
Comparisons of two large phaeoviral genomes and evolutionary implicationsQ48208274
Purification of mammalian serine palmitoyltransferase, a hetero-subunit enzyme for sphingolipid biosynthesis, by affinity-peptide chromatography.Q51835983
Molecular dynamics simulation of the cytosolic mouth in Kcv-type potassium channels.Q51918592
Chlorella viruses encode multiple DNA methyltransferases.Q54134884
Oceanic phytoplankton, atmospheric sulphur, cloud albedo and climateQ55868942
A biogeochemical study of the coccolithophore,Emiliania huxleyi, in the North AtlanticQ56028523
A model system approach to biological climate forcing. The example of Emiliania huxleyiQ56028529
PROPOSAL OFECTOCARPUS SILICULOSUS(ECTOCARPALES, PHAEOPHYCEAE) AS A MODEL ORGANISM FOR BROWN ALGAL GENETICS AND GENOMICSQ56623874
Dynamics of lytic virus infecting the photosynthetic marine picoflagellateMicromonas pusillaQ56854559
Seasonal dynamics in the abundance of Micromonas pusilla (Prasinophyceae) and its viruses in the Gulf of Naples (Mediterranean Sea)Q57038675
The dynamics of Chrysochromulina species in the Skagerrak in relation to environmental conditionsQ57040736
CHARACTERIZATION OF HaRNAV, A SINGLE-STRANDED RNA VIRUS CAUSING LYSIS OF HETEROSIGMA AKASHIWO (RAPHIDOPHYCEAE)1Q57198539
Ecological, Evolutionary, and Geochemical Consequences of Viral Infection of Cyanobacteria and Eukaryotic AlgaeQ57198552
Viruses infecting the marine Prymnesiophyte Chrysochromulina spp.: isolation, preliminary characterization and natural abundanceQ57198571
Note on the taxonomy of Heterosigma akashiwo (Raphidophyceae)Q57255293
Neurotoxins in a toxic red tide of Heterosigma akashiwo (Raphidophyceae) in Kagoshima Bay, JapanQ57255296
Dimethyl sulphide biogeochemistry within a coccolithophore bloom (DISCO): an overviewQ58068932
Coccolithophorid blooms in the global oceanQ58105987
The fate of coccoliths at 48°N 21°W, Northeastern AtlanticQ58305048
Sulphur, climate and the microbial mazeQ58983615
Satellite and ship studies of coccolithophore production along a continental shelf edgeQ59064423
A virus which lyses the marine nanoflagellate Micromonas pusillaQ59098429
Chlorella viruses evoke a rapid release of K+ from host cells during the early phase of infectionQ59177818
Evolutionary History of the CoccolithoviridaeQ59303924
Current understanding of Phaeocystis ecology and biogeochemistry, and perspectives for future researchQ60164556
Wide-spread occurrence and clonal variation in viruses which cause lysis of a cosmopolitan, eukaryotic marine phytoplankter Micromonas pusillaQ60325902
LIFE CYLE AND SEXUALITY OF THE FRESHWATER RAPHIDOPHYTEGONYOSTOMUM SEMEN(RAPHIDOPHYCEAE)Q61411474
Isolation of viruses responsible for the demise of an Emiliania huxleyi bloom in the English ChannelQ61610796
Direct estimates of the contribution of viral lysis and microzooplankton grazing to the decline of a Micromonas spp. populationQ63488734
The role played by viruses in the evolution of their hosts: a view based on informational protein phylogeniesQ73506360
A variable region on the chlorovirus CVK2 genome contains five copies of the gene for Vp260, a viral-surface glycoproteinQ74187294
Viruses in marine brown algaeQ74375295
Expression of a novel marine viral single-chain serine palmitoyltransferase and construction of yeast and mammalian single-chain chimeraQ79337030
C-terminal repetitive motifs in Vp130 present at the unique vertex of the Chlorovirus capsid are essential for binding to the host Chlorella cell wallQ79997321
Viral infection of the symbiotic chlorella-like alga present in Hydra viridisQ81657983
Studies on marine flagellates. V. Morphology and microanatomy of Chrysochromulina strobilus sp. nov.Q103867397
P407language of work or nameEnglishQ1860
P921main subjectPhycodnaviridaeQ1380147
P304page(s)1-42
P577publication date2009-01-01
P1433published inCurrent Topics in Microbiology and ImmunologyQ15752446
P1476titleThe Phycodnaviridae: the story of how tiny giants rule the world
P478volume328

Reverse relations

cites work (P2860)
Q37637010454-pyrosequencing: a molecular battiscope for freshwater viral ecology.
Q36068018A Bacterial Pathogen Displaying Temperature-Enhanced Virulence of the Microalga Emiliania huxleyi.
Q36258542A Glimpse of Nucleo-Cytoplasmic Large DNA Virus Biodiversity through the Eukaryotic Genomics Window
Q92642032A New Family of DNA Viruses Causing Disease in Crustaceans from Diverse Aquatic Biomes
Q37727831A Student's Guide to Giant Viruses Infecting Small Eukaryotes: From Acanthamoeba to Zooxanthellae.
Q34641924A functional calcium-transporting ATPase encoded by chlorella viruses.
Q33970522A protocol for enumeration of aquatic viruses by epifluorescence microscopy using Anodisc™ 13 membranes
Q59807123Ancestrality and Mosaicism of Giant Viruses Supporting the Definition of the Fourth TRUC of Microbes
Q35275869Another really, really big virus
Q28597860Changes in the composition of the RNA virome mark evolutionary transitions in green plants
Q32183430Characterization and Temperature Dependence of Arctic Micromonas polaris Viruses
Q31141107Characterization of a new chlorovirus type with permissive and non-permissive features on phylogenetically related algal strains
Q33993546Chlorella virus ATCV-1 encodes a functional potassium channel of 82 amino acids
Q34434338Chlorovirus PBCV-1 encodes an active copper-zinc superoxide dismutase
Q27022340Chloroviruses: not your everyday plant virus
Q90744259Cloning, expression and characterization of serine palmitoyltransferase (SPT)-like gene subunit (LCB2) from marine Emiliania huxleyi virus (Coccolithovirus)
Q92693694Closely related viruses of the marine picoeukaryotic alga Ostreococcus lucimarinus exhibit different ecological strategies
Q37727844Coccolithoviruses: A Review of Cross-Kingdom Genomic Thievery and Metabolic Thuggery.
Q26851188Common origins and host-dependent diversity of plant and animal viromes
Q40226227Comparative Genomics of Chrysochromulina Ericina Virus and Other Microalga-Infecting Large DNA Viruses Highlights Their Intricate Evolutionary Relationship with the Established Mimiviridae Family
Q27664643Crystal Structure of a Virus-Encoded Putative Glycosyltransferase
Q24612985DNA viruses: the really big ones (giruses)
Q21132293Deep RNA sequencing reveals hidden features and dynamics of early gene transcription in Paramecium bursaria chlorella virus 1
Q33897466Detection of diverse marine algal viruses in the South Sea regions of Korea by PCR amplification of the DNA polymerase and major capsid protein genes
Q41807873Draft genome sequence of four coccolithoviruses: Emiliania huxleyi virus EhV-88, EhV-201, EhV-207, and EhV-208.
Q39667979Draft genome sequence of the Coccolithovirus Emiliania huxleyi virus 203.
Q39740863Draft genome sequence of the coccolithovirus EhV-84.
Q42584022Draft genome sequence of the coccolithovirus Emiliania huxleyi virus 202.
Q91583360Dynamic genome evolution and complex virocell metabolism of globally-distributed giant viruses
Q33936077Evaluation of higher plant virus resistance genes in the green alga, Chlorella variabilis NC64A, during the early phase of infection with Paramecium bursaria chlorella virus-1
Q34381319Exposure to mimivirus collagen promotes arthritis
Q36150274Four novel algal virus genomes discovered from Yellowstone Lake metagenomes
Q34208597Functional HAK/KUP/KT-like potassium transporter encoded by chlorella viruses
Q39573681Generating viral metagenomes from the coral holobiont
Q50485532Genetic exchanges of inteins between prasinoviruses (phycodnaviridae).
Q64071792Genome and Environmental Activity of a Virus and Its Virophages
Q38789441Genomic exploration of individual giant ocean viruses
Q35114709Global analysis of Chlorella variabilis NC64A mRNA profiles during the early phase of Paramecium bursaria chlorella virus-1 infection
Q59125222Hidden diversity of soil giant viruses
Q42577014Horizontal gene transfer of an entire metabolic pathway between a eukaryotic alga and its DNA virus
Q38615459Host-derived viral transporter protein for nitrogen uptake in infected marine phytoplankton
Q34383579Initial Events Associated with Virus PBCV-1 Infection of Chlorella NC64A
Q51147365Insights into toxic Prymnesium parvum blooms: the role of sugars and algal viruses.
Q35678846Isolation and Physiological Characterization of a Novel Algicidal Virus Infecting the Marine Diatom Skeletonema costatum
Q30462689Lipids of archaeal viruses.
Q39179316Marine Prasinoviruses and Their Tiny Plankton Hosts: A Review
Q34451821Metagenomic exploration of viruses throughout the Indian Ocean
Q33558715Microarray analysis of Paramecium bursaria chlorella virus 1 transcription
Q59812926Multiple evolutionary origins of giant viruses
Q90437522Novel Cell-Virus-virophage (CVv) tripartite infection systems are discovered in a freshwater lake, Dishui Lake, in Shanghai, China
Q27498833Pandoraviruses are highly derived phycodnaviruses
Q34299770Phycodnavirus potassium ion channel proteins question the virus molecular piracy hypothesis
Q40477817Phylodynamics and movement of Phycodnaviruses among aquatic environments
Q34295144Phylogenetic analysis of Ostreococcus virus sequences from the Patagonian Coast
Q26822420Physiology of the read-write genome
Q33941097Planktonic microbes in the Gulf of Maine area
Q38110452Potassium ion channels: could they have evolved from viruses?
Q34944670Potential role of viruses in white plague coral disease
Q39100863Promoter Motifs in NCLDVs: An Evolutionary Perspective
Q21245121Remarkable sequence similarity between the dinoflagellate-infecting marine girus and the terrestrial pathogen African swine fever virus
Q40234940Seasonal Dynamics of Haptophytes and dsDNA Algal Viruses Suggest Complex Virus-Host Relationship
Q60956152Seasonality Drives Microbial Community Structure, Shaping both Eukaryotic and Prokaryotic Host⁻Viral Relationships in an Arctic Marine Ecosystem
Q28661724Smaller fleas: viruses of microorganisms
Q33487720Symbiotic virus at the evolutionary intersection of three types of large DNA viruses; iridoviruses, ascoviruses, and ichnoviruses
Q26774409The Autonomous Glycosylation of Large DNA Viruses
Q55025841The Human Virome Protein Cluster Database (HVPC): A Human Viral Metagenomic Database for Diversity and Function Annotation.
Q47553514The genome of a prasinoviruses-related freshwater virus reveals unusual diversity of phycodnaviruses
Q47171827The number of genes encoding repeat domain-containing proteins positively correlates with genome size in amoebal giant viruses
Q40365975Three-year survey of abundance, prevalence and genetic diversity of chlorovirus populations in a small urban lake.
Q34623351Towards defining the chloroviruses: a genomic journey through a genus of large DNA viruses.
Q35895326Tsv-N1: A Novel DNA Algal Virus that Infects Tetraselmis striata
Q34335127Unique nucleocytoplasmic dsDNA and +ssRNA viruses are associated with the dinoflagellate endosymbionts of corals
Q28657444Unveiling of the diversity of Prasinoviruses (Phycodnaviridae) in marine samples by using high-throughput sequencing analyses of PCR-amplified DNA polymerase and major capsid protein genes
Q42254422Variations in abundance, genome size, morphology, and functional role of the virioplankton in Lakes Annecy and Bourget over a 1-year period

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