Phylogeny and biogeography of Allium (Amaryllidaceae: Allieae) based on nuclear ribosomal internal transcribed spacer and chloroplast rps16 sequences, focusing on the inclusion of species endemic to China

scientific article published on November 1, 2010

Phylogeny and biogeography of Allium (Amaryllidaceae: Allieae) based on nuclear ribosomal internal transcribed spacer and chloroplast rps16 sequences, focusing on the inclusion of species endemic to China is …
instance of (P31):
scholarly articleQ13442814

External links are
P356DOI10.1093/AOB/MCQ177
P953full work available at URLhttp://aob.oxfordjournals.org/cgi/content/abstract/106/5/709
https://academic.oup.com/aob/article-pdf/106/5/709/17000686/mcq177.pdf
https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/20966186/pdf/?tool=EBI
https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/20966186/?tool=EBI
https://europepmc.org/articles/PMC2958792
https://europepmc.org/articles/PMC2958792?pdf=render
https://doi.org/10.1093/aob/mcq177
http://academic.oup.com/aob/article-pdf/106/5/709/17000686/mcq177.pdf
P3181OpenCitations bibliographic resource ID1309160
P932PMC publication ID2958792
P698PubMed publication ID20966186
P5875ResearchGate publication ID47519962

P50authorYan YuQ104579507
P2093author name stringXing-Jin He
Qin-Qin Li
Yu-Cheng Zhang
Song-Dong Zhou
Xian-Qin Wei
P2860cites workTrudy Imperatorskago S.-Peterburgskago Botaničeskago SadaQ5479555
Acta Phytotaxonomica SinicaQ5656885
Nordic Journal of BotanyQ2686388
Molecular Phylogenetics and EvolutionQ4248868
An update of the Angiosperm Phylogeny Group classification for the orders and families of flowering plants: APG IIIQ13683362
A subfamilial classification for the expanded asparagalean families Amaryllidaceae, Asparagaceae and XanthorrhoeaceaeQ14394804
Flora MediterraneaQ17632380
MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) Software Version 4.0Q26778434
MrBayes 3: Bayesian phylogenetic inference under mixed modelsQ26778438
Phylogenetic utility of the internal transcribed spacers of nuclear ribosomal DNA in plants: an example from the compositaeQ28181213
Maximum likelihood inference of geographic range evolution by dispersal, local extinction, and cladogenesisQ28267497
Phylogenetic analysis of Hordeum (Poaceae) as inferred by nuclear rDNA ITS sequencesQ28279563
Resurrection of Themidaceae for the Brodiaea alliance, and Recircumscription of Alliaceae, Amaryllidaceae and AgapanthoideaeQ28958164
A Likelihood Framework for Inferring the Evolution of Geographic Range on Phylogenetic TreesQ29300304
Phylogenetic relationships and evolutionary traits in Ranunculus s.l. (Ranunculaceae) inferred from ITS sequence analysisQ29393947
Multiple sequence alignment with Clustal XQ29547758
S-DIVA (Statistical Dispersal-Vicariance Analysis): A tool for inferring biogeographic historiesQ29619440
The utility of the incongruence length difference test.Q31109166
Phylogeny and biogeography of the genus Ainsliaea (Asteraceae) in the Sino-Japanese region based on nuclear rDNA and plastid DNA sequence dataQ31135358
Phylogenetics and biogeography of the broad-nosed bats, genus Platyrrhinus (Chiroptera: Phyllostomidae).Q33377359
Molecular and morphological evidence for an origin of the aberrant genus Milula within himalayan species of Allium (Alliacae).Q33925654
The origin and evolution of Eragrostis tef (Poaceae) and related polyploids: evidence from nuclear waxy and plastid rps16.Q33928465
Onset of Asian desertification by 22 Myr ago inferred from loess deposits in ChinaQ34118465
Phylogenetic relationships within Senna (Leguminosae, Cassiinae) based on three chloroplast DNA regions: patterns in the evolution of floral symmetry and extrafloral nectariesQ34190228
Molecular systematics of Iridaceae: evidence from four plastid DNA regions.Q34192171
How and when did Old World ratsnakes disperse into the New World?Q34582699
A molecular phylogeny of the wild onions (Allium; Alliaceae) with a focus on the western North American center of diversity.Q34742805
Origins of Allium ampeloprasum horticultural groups and a molecular phylogeny of the section Allium (Allium: Alliaceae).Q35001353
Phylogenetic analysis of Allium subg. Melanocrommyum infers cryptic species and demands a new sectional classification.Q46027479
The evolutionary history of Eryngium (Apiaceae, Saniculoideae): rapid radiations, long distance dispersals, and hybridizationsQ46333277
Accounting for phylogenetic uncertainty in biogeography: a Bayesian approach to dispersal-vicariance analysis of the thrushes (Aves: Turdus).Q46343890
Evolution of genome size across some cultivated Allium speciesQ47370971
Evolution of the chloroplast genome and polymorphic ITS regions in Allium subg. MelanocrommyumQ47892650
Dated historical biogeography of the temperate Loliinae (Poaceae, Pooideae) grasses in the northern and southern hemispheresQ48075292
Phylogeny and New Intrageneric Classification of Allium (Alliaceae) Based on Nuclear Ribosomal DNA ITS SequencesQ54801366
New Allium (Alliaceae) species from Tajikistan, Kyrgyzstan, and UzbekistanQ55762212
The age of major monocot groups inferred from 800+rbcL sequencesQ55877791
Origin of some minor vegetatively propagated Allium crops studied with RAPD and GISHQ55933453
Chloroplast DNA restriction analysis and the infrageneric grouping ofAllium (Alliaceae)Q56003908
Phylogeny of Allium L. subgenus Rhizirideum (G. Don ex Koch) Wendelbo according to dot blot hybridization with randomly amplified DNA probesQ56003909
The Eocene North Atlantic land bridge:its importance in Tertiary and modern phytogeography of the Northern HemisphereQ56008150
The its Region of Nuclear Ribosomal DNA: A Valuable Source of Evidence on Angiosperm PhylogenyQ56482683
Chloroplast rps16 intron phylogeny of the tribe Sileneae (Caryophyllaceae)Q56639854
RAPDs and noncoding chloroplast DNA reveal a single origin of the cultivated Allium fistulosum from A. altaicum (Alliaceae)Q77330377
[Structure characteristics of the chloroplast rpS16 intron in Allium sativum and related Allium species]Q84869106
Testing Significance of IncongruenceQ92270877
Notes on Some Infrageneric Taxa in Allium L.Q93622983
Criteria for Sampling in Allium Based on Chloroplast DNA PCR-RFLP'SQ95465272
Estimating ancestral distributions of lineages with uncertain sister groups: a statistical approach to Dispersal-Vicariance Analysis and a case using Aesculus L. (Sapindaceae) including fossilsQ111629109
P433issue5
P407language of work or nameEnglishQ1860
P921main subjectPeople's Republic of ChinaQ148
biogeographyQ52106
AmaryllidaceaeQ155848
phylogeneticsQ171184
P304page(s)709-33
P577publication date2010-11-01
P1433published inAnnals of BotanyQ1821243
P1476titlePhylogeny and biogeography of Allium (Amaryllidaceae: Allieae) based on nuclear ribosomal internal transcribed spacer and chloroplast rps16 sequences, focusing on the inclusion of species endemic to China
P478volume106

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cites work (P2860)
Q97075122Adaptation Evolution and Phylogenetic Analyses of Species in Chinese Allium Section Pallasia and Related Species Based on Complete Chloroplast Genome Sequences
Q64023971Allium albanicum (Amaryllidaceae), a new species from Balkans and its relationships with A. meteoricum Heldr. & Hausskn. ex Halácsy
Q110951464Allium ducissae (A. subgen. Polyprason, Amaryllidaceae) a New Species from the Central Apennines (Italy)
Q54801834Allium pervariensis, sect. Allium (Amaryllidaceae), a new species from Siirt Turkey
Q116675237Allium sulaimanicum: A new Allium species and section from Pakistan
Q40158992Allium telomeres unmasked: the unusual telomeric sequence (CTCGGTTATGGG)n is synthesized by telomerase
Q90134837Chloroplast genomic comparison of two sister species Allium macranthum and A. fasciculatum provides valuable insights into adaptive evolution
Q36293142Clock-dated phylogeny for 48% of the 700 species of Crotalaria (Fabaceae-Papilionoideae) resolves sections worldwide and implies conserved flower and leaf traits throughout its pantropical range
Q95264549Comparative Analysis of the Complete Chloroplast Genomes in Allium Subgenus Cyathophora (Amaryllidaceae): Phylogenetic Relationship and Adaptive Evolution
Q64275893Comparative Dissection of Three Giant Genomes: , , and
Q92797377Complete chloroplast genome sequences of four Allium species: comparative and phylogenetic analyses
Q33353084Cytogenetic and molecular evidence suggest multiple origins and geographical parthenogenesis in Nothoscordum gracile (Alliaceae).
Q92132738Divide to Conquer: Evolutionary History of Allioideae Tribes (Amaryllidaceae) Is Linked to Distinct Trends of Karyotype Evolution
Q47219732Evolution of the platycodonoid group with particular references to biogeography and character evolution
Q28659210Evolutionary diversifications of plants on the Qinghai-Tibetan Plateau
Q55085672Genome Size, Molecular Phylogeny, and Evolutionary History of the Tribe Aquilarieae (Thymelaeaceae), the Natural Source of Agarwood.
Q111629364Intraspecific differentiation of Allium wallichii (Amaryllidaceae) inferred from chloroplast DNA and internal transcribed spacer fragments
Q111629396Intraspecific differentiation of Pleurospermum hookeri (Apiaceae), and its interspecific relationships with two close relatives in the genus Pleurospermum
Q57797553Karyotype analysis of eight cultivated Allium species
Q43295847Molecular and morphological revision of theAllium saxatilegroup (Amaryllidaceae): geographical isolation as the driving force of underestimated speciation
Q28598157Molecular phylogeny, divergence time estimates and historical biogeography within one of the world's largest monocot genera
Q39038521Origin and diversification of the Milla Clade (Brodiaeoideae, Asparagaceae): a Neotropical group of six geophytic genera.
Q46110161Phylogenetic reappraisal of Allium subgenus Cyathophora (Amaryllidaceae) and related taxa, with a proposal of two new sections.
Q92943294Phylogeny and highland adaptation of Chinese species in Allium section Daghestanica (Amaryllidaceae) revealed by transcriptome sequencing
Q40240701Phylogeny of Allium L. subgenus Anguinum (G. Don. ex W.D.J. Koch) N. Friesen (Amaryllidaceae).
Q64079109Phylogeny of Chinese Species in Section and Adaptive Evolution of (Amaryllidaceae, Allioideae) Species Revealed by the Chloroplast Complete Genome
Q91708664Phylogeography of two closely related species of Allium endemic to East Asia: Population evolution in response to climate oscillations
Q46656013Revisiting the evolutionary events in Allium subgenus Cyathophora (Amaryllidaceae): Insights into the effect of the Hengduan Mountains Region (HMR) uplift and Quaternary climatic fluctuations to the environmental changes in the Qinghai-Tibet Plateau
Q99605792Seed Morphology of Allium L. (Amaryllidaceae) from Central Asian Countries and Its Taxonomic Implications
Q57093669Spatio-temporal evolution of L. in the Qinghai-Tibet-Plateau region: Immigration and radiation
Q26764795Steroidal saponins from the genus Allium
Q36274590Study of phytochemical, anti-microbial, anti-oxidant, and anti-cancer properties of Allium wallichii.
Q55921310Systematics of disjunct northeastern Asian and northern North American Allium (Amaryllidaceae)
Q38985230Tandem repeats of Allium fistulosum associated with major chromosomal landmarks.
Q47143950Taxonomic assessment of Allium species from Kazakhstan based on ITS and matK markers
Q110857856Taxonomy and phylogenetics of Allium section Decipientia (Amaryllidaceae): morphological characters do not reflect the evolutionary history revealed by molecular markers
Q57091432The effect of Hengduan Mountains Region (HMR) uplift to environmental changes in the HMR and its eastern adjacent area: Tracing the evolutionary history of Allium section Sikkimensia (Amaryllidaceae)
Q21261987Triparental origin of triploid onion, Allium × cornutum (Clementi ex Visiani, 1842), as evidenced by molecular, phylogenetic and cytogenetic analyses
Q36214919Tubulin cytoskeleton during microsporogenesis in the male-sterile genotype of Allium sativum and fertile Allium ampeloprasum L.
Q57405834What isAllium paniculatum? Establishing taxonomic and molecular phylogenetic relationships withinA. sect.Codonoprasum
Q111741591Allium heterophyllum (Amaryllidaceae), a new species from Henan, China
Q116675495Allium sunhangii – a new species from section Brevidentia F.O.Khass. & Iengal. (Amaryllidaceae) from Southern Pamir-Alay, Uzbekistan