Analysis of E. coli promoter sequences

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Analysis of E. coli promoter sequences is …
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scholarly articleQ13442814

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P356DOI10.1093/NAR/15.5.2343
P3181OpenCitations bibliographic resource ID970414
P932PMC publication ID340638
P698PubMed publication ID3550697
P5875ResearchGate publication ID31463351

P2093author name stringC B Harley
R P Reynolds
P2860cites workTranscription from a heat-inducible promoter causes heat shock regulation of the sigma subunit of E. coli RNA polymeraseQ70373276
Regulatory region of the metA gene of Escherichia coli K-12.Q105012602
Nucleotide sequence of an RNA polymerase binding site at an early T7 promoterQ24564607
Nucleotide sequence of an RNA polymerase binding site from the DNA of bacteriophage fdQ24564619
A unique mechanism regulating gene expression: translational inhibition by a complementary RNA transcript (micRNA)Q24594977
Structure and function of the internal promoter (hisBp) of the Escherichia coli K-12 histidine operonQ28265520
Sizing and mapping of early adenovirus mRNAs by gel electrophoresis of S1 endonuclease-digested hybridsQ29618273
Identification of a novel ampC beta-lactamase promoter in a clinical isolate of Escherichia coli.Q33928255
The E. coli divE mutation, which differentially inhibits synthesis of certain proteins, is in tRNASer1Q33939520
Structural analysis of the dnaA and dnaN genes of Escherichia coliQ34251117
Two improved promoter sequences for the β-lactamase expression arising from a single base-pair substitutionQ35274254
Correlation between the rate of productive transcription initiation and the strand-melting property of Escherichia coli promotersQ35296366
Sequences of the ssb gene and proteinQ35399589
DNA sequence and transcription of the region upstream of theE. coli gyrB geneQ35438437
A convenient technique to compare the efficiency of promoters in Escherichia coliQ35559090
Promoter selectivity of E. coli RNA polymerase: analysis of the promoter system of convergently-transcribed dnaQ-rnh genesQ35563387
The coupled use of ‘footprinting’ and exonuclease III methodology for RNA polymerase binding and initiation. Application for the analysis of three tandem promoters at the control region of colicin EIQ35671271
Search algorithm for pattern match analysis of nuleic add sequencesQ35675655
Molecular cloning and sequencing ofpheU, a gene forEscherichia colitRNAPheQ35678706
A lac promoter with a changed distance between -10 and -35 regionsQ35683249
The nucleotide sequence of replication and maintenance functions encoded by plasmid PSCl0lQ35685934
Nucleotide sequence of the promoter region of the E. coli lysC geneQ35687529
Nucleotide sequence ofmetF, theE. colistructural gene for 5–10 methylene tetrahydrofolate reductase and of its control regionQ35688884
The nucleotide sequence of the replication origin of plasmid NTP1Q35742027
Characterizing wild-type and mutant promoters of the tetracycline resistance gene in pBR313Q35756526
Promoter analysis of the phosphoenolpyruvate carboxylase gene of Escherichia coliQ36132673
Nucleotide sequence determination of a strong promoter of the colicin E 1 plasmid. Analysis of restriction sites protected by RNA polymerase interactions before and after limited transcriptionQ36175649
Characterization by deletion mutagenesis in vitro of the promoter region of ompF, a positively regulated gene of Escherichia coli.Q48387429
Cloning and sequence analysis of the Escherichia coli 4.5 S RNA geneQ48387434
Nucleotide sequence of the heat shock regulatory gene of E. coli suggests its protein product may be a transcription factorQ48388712
Nucleotide sequence of gene pfkB encoding the minor phosphofructokinase of Escherichia coli K-12Q48390249
The selection and characterisation of two novel mutations in the overlapping promoters of the Escherichia coli galactose operonQ48390765
DNA sequence of the Escherichia coli gene, gnd, for 6-phosphogluconate dehydrogenaseQ48392261
Structure of the metJBLF cluster in Escherichia coli K12. Sequence of the metB structural gene and of the 5'- and 3'-flanking regions of the metBL operonQ48394059
The araE low affinity L-arabinose transport promoter. Cloning, sequence, transcription start site and DNA binding sites of regulatory proteinsQ48394064
The control region of the F plasmid transfer operon: DNA sequence of the traJ and traY genes and characterisation of the traY → Z promoterQ48394485
The 5'-terminal ribonucleotide of an in vitro ColE1 transcript is not complementary to the DNA templateQ48394715
RNA polymerase interactions with the upstream region of the E. coli tyrT promoterQ48395431
Nucleotide sequence of the Escherichia coli pyrE gene and of the DNA in front of the protein-coding regionQ48396306
Molecular cloning of the gene for phosphofructokinase-2 of Escherichia coli and the nature of a mutation, pfkB1, causing a high level of the enzymeQ48397009
Overlapping divergent promoters control expression of Tn10 tetracycline resistance.Q48397098
Nucleotide sequence of the promoter region of the citrate synthase gene (gltA) of Escherichia coliQ48397982
Characterization of the Escherichia coli gene for serine hydroxymethyltransferaseQ48399248
Identification of two new promoters probably involved in the transcription of a ribosomal RNA gene of Escherichia coliQ48399559
The origin of replication of plasmid p15A and comparative studies on the nucleotide sequences around the origin of related plasmidsQ48401305
Construction and analysis of in vivo activity of E. coli promoter hybrids and promoter mutants that alter the -35 to -10 spacingQ48401758
Osmoregulation of gene expression. I. DNA sequence of the ompR gene of the ompB operon of Escherichia coli and characterization of its gene productQ48402013
The nucleotide sequence of the promoter region of hisS, the structural gene for histidyl-tRNA synthetaseQ48404827
Nucleotide sequence of the argF regulatory region of Escherichia coli K-12Q48407323
Interaction of cAMP receptor protein with the ompA gene, a gene for a major outer membrane protein of Escherichia coliQ48409306
Transcriptional regulation of the mercury-resistance genes of transposon Tn501.Q54148280
Both inverted repeat sequences located at the ends of IS1 provide promoter functionsQ54798497
Sequence of promoter for coat protein gene of bacteriophage fdQ59091011
Unequal crossover and the evolution of multigene familiesQ69047999
Transcription analysis of the sucAB, aceEF and lpd genes of Escherichia coliQ69905794
Plasmid pSC101 replication mutants generated by insertion of the transposon Tn1000Q70170802
DNA rearrangements generating artificial promotersQ70218331
tRNAMetf2 gene in the leader region of the nusA operon in Escherichia coliQ36247138
DNA sequence of the carA gene and the control region of carAB: tandem promoters, respectively controlled by arginine and the pyrimidines, regulate the synthesis of carbamoyl-phosphate synthetase in Escherichia coli K-12.Q36264803
Spacer mutations in the lac ps promoterQ36281782
Identification and regulation of the glnL operator-promoter of the complex glnALG operon of Escherichia coliQ36286493
Evidence for an internal promoter in the Escherichia coli threonine operon.Q36290047
Essential and nonessential sequences in malPp, a positively controlled promoter in Escherichia coliQ36292613
Functional limits of the araIc promoter suggest an additional regulatory site for araBAD expressionQ36298856
Gene sequence and predicted amino acid sequence of the motA protein, a membrane-associated protein required for flagellar rotation in Escherichia coliQ36303751
Regulatory region of the metA gene of Escherichia coli K-12.Q36304846
Promoter mapping and transcriptional regulation of the iron assimilation system of plasmid ColV-K30 in Escherichia coli K-12Q36305523
In vivo 5' terminus and length of the mRNA for the proton-translocating ATPase (unc) operon of Escherichia coliQ36332460
Unusual organization of the ilvIH promoter of Escherichia coliQ36361547
Cloning and DNA sequence of a plasmid-determined citrate utilization system in Escherichia coliQ36367601
Transcription of the Escherichia coli fumarate reductase genes (frdABCD) and their coordinate regulation by oxygen, nitrate, and fumarate.Q36368066
DNA sequence of the Escherichia coli tonB geneQ37347177
F sex factor encodes a single-stranded DNA binding protein (SSB) with extensive sequence homology to Escherichia coli SSB.Q37348417
Structure and expression of the dnaQ mutator and the RNase H genes of Escherichia coli: overlap of the promoter regionsQ37508488
Mercuric ion-resistance operons of plasmid R100 and transposon Tn501: the beginning of the operon including the regulatory region and the first two structural genesQ37569888
Attenuation control of pyrBI operon expression in Escherichia coli K-12Q37601406
Processing of transcription products of the gene encoding the RNA component of RNase PQ37617433
Consensus sequence for Escherichia coli heat shock gene promotersQ37685680
Active site and complete sequence of the suicidal methyltransferase that counters alkylation mutagenesisQ37685706
Point mutations that reduce the expression of malPQ, a positively controlled operon of Escherichia coliQ38353613
Structure of a promotor on plasmid pMB9 derived from plasmid pSC101Q38357003
Sequence determinants of promoter activityQ38580829
Regulatory sequences involved in the promotion and termination of RNA transcriptionQ39512868
Compilation and analysis ofEscherichia colipromoter DNA sequencesQ39512880
Mechanism and control of transcription initiation in prokaryotesQ39826664
Transposon Tn10 contains two structural genes with opposite polarity between tetA and IS10R.Q39965982
Construction and characterization of a deletion mutant lacking micF, a proposed regulatory gene for OmpF synthesis in Escherichia coli.Q39970076
Nucleotide sequence of the gene determining plasmid-mediated citrate utilizationQ39981463
Protein-nucleic acid interactions in transcription: a molecular analysisQ40111449
E. coli RNA polymerase interacts homologously with two different promotersQ40120633
The nucleotide sequence of the clonednusAgene and its flanking region ofEscherichia coliQ40455239
ThetrfA andtrfB promoter regions of broad host range plasmid RK2 share common potential regulatory sequencesQ40455406
Complete nuleotide sequence of the fumarase genefumA, ofEscherichia coliQ40455412
The internal regulated promoter of thedeooperon ofEseherichia coK-12Q40456302
Molecular cloning and nucleotide sequencing of the gene for E. coli cAMP receptor proteinQ40463703
The nucleotide sequence of the bacteriocin promoters of plasmids Clo DF13 and Col El: role of lexA repressor and cAMP in the regulation of promoter activityQ40463976
Computer methods to locate signals in nucleic acid sequencesQ40466746
Escherichia colipromoter sequences predictin vitroRNA polymerase selectivityQ40466920
Cloning and promoter analysis of theEscherichia coliadenylate cyclase geneQ40491456
Molecular basis for modulated regulation of gene expression in the arginine regulon ofEscherichia coliK-12Q40492885
Essential structure ofE. colipromoter effect of spacer length between the two consensus sequences on promoter functionQ40493380
Transcription of the uvrD gene of Escherichia coli is controlled by the lexA repressor and by attenuationQ40495039
The regulatory region of the divergent argECBH operon in Escherichia coli K-12.Q40497721
Up-promoter mutations in the lpp gene of Escherichia coliQ40568903
Essential structure of E. coli promoter II. Effect of the sequences around the RNA start point on promoter functionQ40569263
Structure of the promoter region for the rrnB gene in Eacherichia coliQ40574788
Interaction of RNA Polymerase with Promoters from Bacteriophage fdQ40645180
The nucleotide sequence of the dnaA gene promoter and of the adjacent rpmH gene, coding for the ribosomal protein L34, of Escherichia coliQ41312173
Regulation of the uvrC gene of Escherichia coli K12: localization and characterization of a damage-inducible promoterQ41467043
Characterization in vitro of the effect of spacer length on the activity of Escherichia coli RNA polymerase at the TAC promoterQ41485300
The F plasmid origin of transfer: DNA sequence of wild-type and mutant origins and location of origin-specific nicksQ41572141
Structure of the Escherichia coli pyrE operon and control of pyrE expression by a UTP modulated intercistronic attentuationQ41577429
Nucleotide sequence encoding the flavoprotein and hydrophobic subunits of the succinate dehydrogenase of Escherichia coliQ41823999
Insertion of transposon Tn7 into the Escherichia coli glmS transcriptional terminatorQ41872134
Functional dissection of Escherichia coli promoters: information in the transcribed region is involved in late steps of the overall process.Q41899735
DNA sequence around the Escherichia coli unc operon. Completion of the sequence of a 17 kilobase segment containing asnA, oriC, unc, glmS and phoS.Q42113169
Promoters of Escherichia coli: a hierarchy of in vivo strength indicates alternate structures.Q42159661
Characterization of the ileS-lsp operon in Escherichia coli. Identification of an open reading frame upstream of the ileS gene and potential promoter(s) for the ileS-lsp operonQ42651895
Nucleotide sequence of the pyrD gene of Escherichia coli and characterization of the flavoprotein dihydroorotate dehydrogenaseQ42651964
Bacteriophage T7 E promoter: identification and measurement of kinetics of association with Escherichia coli RNA polymeraseQ42662656
Primary structure of histidine-tRNA synthetase and characterization of hisS transcriptsQ48376093
Purification and structure of the intact Ada regulatory protein of Escherichia coli K12, O6-methylguanine-DNA methyltransferase.Q48377841
Characterization of the lep operon of Escherichia coli. Identification of the promoter and the gene upstream of the signal peptidase I gene.Q48377851
Spacing of the -10 and -35 regions in the tac promoter. Effect on its in vivo activityQ48380581
Transcription of the replication control region of the IncFII R-plasmid NR1 in vitro and in vivoQ48381552
Nucleotide sequence and transcription of the phenylalanine and tyrosine operons of Escherichia coli K12.Q48384284
Regulation of expression and nucleotide sequence of the Escherichia coli dapD geneQ48384837
Nucleotide sequence and transcriptional start point of the phosphomannose isomerase gene (manA) of Escherichia coliQ48385117
Regulation of Mu transposition II. The Escherichia coli HimD protein positively controls two repressor promoters and the early promoter of bacteriophage MuQ48385246
Genetic and physical analysis of the thioredoxin (trxA) gene of Escherichia coli K-12.Q48385260
P433issue5
P407language of work or nameEnglishQ1860
P921main subjectEscherichia coliQ25419
P304page(s)2343-61
P577publication date1987-03-11
P1433published inNucleic Acids ResearchQ135122
P1476titleAnalysis of E. coli promoter sequences
P478volume15