Cis-acting determinants of asymmetric, cytoplasmic RNA transport

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Cis-acting determinants of asymmetric, cytoplasmic RNA transport is …
instance of (P31):
review articleQ7318358
scholarly articleQ13442814

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P356DOI10.1261/RNA.262607
P8608Fatcat IDrelease_bolanmarf5fchpwhvcz6ervqva
P3181OpenCitations bibliographic resource ID434752
P932PMC publication ID1852811
P698PubMed publication ID17449729
P5875ResearchGate publication ID6378669

P50authorAshwini JambhekarQ64512449
P2093author name stringJoseph L Derisi
Ashwini Jambhekar
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Mother cell-specific HO expression in budding yeast depends on the unconventional myosin myo4p and other cytoplasmic proteinsQ27933630
ASH1 mRNA localization in three actsQ27934216
She2p is a novel RNA-binding protein that recruits the Myo4p-She3p complex to ASH1 mRNA.Q27934620
Plasma membrane compartmentalization in yeast by messenger RNA transport and a septin diffusion barrierQ27934890
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Two distinct mechanisms localise cyclin B transcripts in syncytial Drosophila embryosQ47070273
Kinesin II mediates Vg1 mRNA transport in Xenopus oocytesQ47221009
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Hrp48, a Drosophila hnRNPA/B homolog, binds and regulates translation of oskar mRNA.Q47640223
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A Xenopus protein related to hnRNP I has a role in cytoplasmic RNA localizationQ47921592
A highly conserved RNA-binding protein for cytoplasmic mRNA localization in vertebratesQ48038140
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Two copies of a subelement from the Vg1 RNA localization sequence are sufficient to direct vegetal localization in Xenopus oocytesQ48950298
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Cytoplasmic flows localize injected oskar RNA in Drosophila oocytes.Q48959081
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RNA transport to the vegetal cortex of Xenopus oocytesQ48975098
Patterns of localization and cytoskeletal association of two vegetally localized RNAs, Vg1 and Xcat-2.Q49071842
Microtubules are a general component of mRNA localization systems in Drosophila oocytesQ49071926
A new yeast PUF family protein, Puf6p, represses ASH1 mRNA translation and is required for its localizationQ27935017
The myosin motor, Myo4p, binds Ash1 mRNA via the adapter protein, She3pQ27935377
She2p, a novel RNA-binding protein tethers ASH1 mRNA to the Myo4p myosin motor via She3pQ27937627
The Khd1 protein, which has three KH RNA-binding motifs, is required for proper localization of ASH1 mRNA in yeastQ27938154
Loc1p is required for efficient assembly and nuclear export of the 60S ribosomal subunitQ27938349
Actin-dependent localization of an RNA encoding a cell-fate determinant in yeast.Q27939756
Mutational analysis of a heterogeneous nuclear ribonucleoprotein A2 response element for RNA traffickingQ28115780
Overlapping but distinct RNA elements control repression and activation of nanos translationQ28140067
CLIP identifies Nova-regulated RNA networks in the brainQ28184312
Drosophila Y14 shuttles to the posterior of the oocyte and is required for oskar mRNA transportQ28204001
Cup is an eIF4E binding protein required for both the translational repression of oskar and the recruitment of BarentszQ28235613
Secondary structure of the 3' UTR of bicoid mRNAQ28249967
gurken and the I factor retrotransposon RNAs share common localization signals and machineryQ28259364
A small predicted stem-loop structure mediates oocyte localization of Drosophila K10 mRNAQ28274596
CLIP: a method for identifying protein-RNA interaction sites in living cellsQ28284054
cis-acting sequences responsible for anterior localization of bicoid mRNA in Drosophila embryosQ28291425
bicoid mRNA localization signal: phylogenetic conservation of function and RNA secondary structureQ28292316
Neuronal BC1 RNA structure: evolutionary conversion of a tRNA(Ala) domain into an extended stem-loop structureQ28364823
hnRNP A2 selectively binds the cytoplasmic transport sequence of myelin basic protein mRNAQ28565429
Embryonic lethal abnormal vision-like RNA-binding proteins regulate neurite outgrowth and tau expression in PC12 cellsQ28580381
Localization of ASH1 mRNA particles in living yeastQ29614818
Visualizing the distribution and transport of mRNAs in living cellsQ30485891
Single mRNA molecules demonstrate probabilistic movement in living mammalian cellsQ30716659
Identification of a conserved RNA motif essential for She2p recognition and mRNA localization to the yeast bud.Q30784228
Evidence for overlapping, but not identical, protein machineries operating in vegetal RNA localization along early and late pathways in Xenopus oocytesQ31104868
In vivo analyses of cytoplasmic transport and cytoskeletal organization during Drosophila oogenesis: characterization of a multi-step anterior localization pathway.Q32033949
Unbiased selection of localization elements reveals cis-acting determinants of mRNA bud localization in Saccharomyces cerevisiaeQ33228447
exl protein specifically binds BLE1, a bicoid mRNA localization element, and is required for one phase of its activityQ33802180
Recognition of the bcd mRNA localization signal in Drosophila embryos and ovariesQ33823726
fatvg encodes a new localized RNA that uses a 25-nucleotide element (FVLE1) to localize to the vegetal cortex of Xenopus oocytes.Q33877756
Logic functions of the genomic cis-regulatory codeQ33935921
Interactions of elongation factor 1alpha with F-actin and beta-actin mRNA: implications for anchoring mRNA in cell protrusionsQ33953724
Vegetal messenger RNA localization directed by a 340-nt RNA sequence element in Xenopus oocytesQ33982018
staufen, a gene required to localize maternal RNAs in the Drosophila eggQ34001131
ConStruct: a tool for thermodynamic controlled prediction of conserved secondary structureQ39729402
Splicing of oskar RNA in the nucleus is coupled to its cytoplasmic localizationQ40513675
Dual FRET molecular beacons for mRNA detection in living cellsQ40566774
The protein Mago provides a link between splicing and mRNA localization.Q40763486
Localization of gurken RNA in Drosophila oogenesis requires elements in the 5' and 3' regions of the transcriptQ40767187
Axonal tau mRNA localization coincides with tau protein in living neuronal cells and depends on axonal targeting signal.Q40784608
The role of oocyte transcription, the 5'UTR, and translation repression and derepression in Drosophila gurken mRNA and protein localizationQ40823768
RNA secondary structure prediction based on free energy and phylogenetic analysisQ41672721
Redundant RNA recognition events in bicoid mRNA localizationQ41985281
Ribonucleoprotein-dependent localization of the yeast class V myosin Myo4p.Q42130199
Evidence for common machinery utilized by the early and late RNA localization pathways in Xenopus oocytesQ42472825
A phylogenetically based secondary structure for the yeast telomerase RNA.Q43520446
Evidence for a highly selective RNA transport system and its role in establishing the dorsoventral axis of the Drosophila eggQ43724135
Staufen protein associates with the 3'UTR of bicoid mRNA to form particles that move in a microtubule-dependent mannerQ49075903
Translocation of repetitive RNA sequences with the germ plasm in Xenopus oocytesQ49124861
Multiple RNA regulatory elements mediate distinct steps in localization of oskar mRNA.Q49134919
Xvelo1 uses a novel 75-nucleotide signal sequence that drives vegetal localization along the late pathway in Xenopus oocytes.Q50681993
Conserved and clustered RNA recognition sequences are a critical feature of signals directing RNA localization in Xenopus oocytes.Q50682648
The vegetally localized mRNA fatvg is associated with the germ plasm in the early embryo and is later expressed in the fat body.Q50720551
Localization of Xcat-2 RNA, a putative germ plasm component, to the mitochondrial cloud in Xenopus stage I oocytes.Q50760294
Localization of nanos RNA controls embryonic polarityQ50789762
3' non-translated sequences in Drosophila cyclin B transcripts direct posterior pole accumulation late in oogenesis and peri-nuclear association in syncytial embryos.Q50791091
Recognition of a bicoid mRNA localization signal by a protein complex containing Swallow, Nod, and RNA binding proteins.Q52110158
Recognition and long-range interactions of a minimal nanos RNA localization signal element.Q52141996
A conserved 90 nucleotide element mediates translational repression of nanos RNA.Q52200196
Transcripts of one of two Drosophila cyclin genes become localized in pole cells during embryogenesis.Q52453618
Molecular analysis of the swallow gene of Drosophila melanogaster.Q52459891
Identification of cis-acting sequences that control nanos RNA localization.Q52548072
RNA localization: different zipcodes, same postman?Q52566340
ASH1 mRNA localization in yeast involves multiple secondary structural elementsand Ash1 protein translationQ57270139
She2p Is a Novel RNA Binding Protein with a Basic Helical Hairpin MotifQ57639856
Localization and anchoring of mRNA in budding yeastQ58486716
A two-step model for the localization of maternal mRNA in Xenopus oocytes: involvement of microtubules and microfilaments in the translocation and anchoring of Vg1 mRNAQ68810049
cis‐Acting signals and trans‐acting proteins are involved in tau mRNA targeting into neurites of differentiating neuronal cellsQ71969089
Two cis-acting elements in the 3' untranslated region of alpha-CaMKII regulate its dendritic targetingQ73088825
Identification of cis elements which direct the localization of maternal mRNAs to the posterior pole of ascidian embryosQ77147302
Structural elements required for the localization of ASH1 mRNA and of a green fluorescent protein reporter particle in vivoQ77342903
Asymmetric sorting of ash1p in yeast results from inhibition of translation by localization elements in the mRNAQ78723562
RNA regulatory element BLE1 directs the early steps of bicoid mRNA localizationQ34061089
Differential subcellular mRNA targeting: deletion of a single nucleotide prevents the transport to axons but not to dendrites of rat hypothalamic magnocellular neuronsQ34327247
Small bristles, the Drosophila ortholog of NXF-1, is essential for mRNA export throughout developmentQ34364095
The positional, structural, and sequence requirements of the Drosophila TLS RNA localization elementQ34366453
RNP localization and transport in yeast.Q34425172
Translational regulation and RNA localization in Drosophila oocytes and embryos.Q34432249
Finding the most significant common sequence and structure motifs in a set of RNA sequencesQ34635992
Distinct roles of two conserved Staufen domains in oskar mRNA localization and translationQ34668374
A platform for compartmentalized protein synthesis: protein translation and translocation in the ER.Q34970757
Intracellular mRNA localization: motors move messages.Q35006503
The RNA-binding protein Tsunagi interacts with Mago Nashi to establish polarity and localize oskar mRNA during Drosophila oogenesis.Q35081921
A function for kinesin I in the posterior transport of oskar mRNA and Staufen proteinQ35574095
Determinants of mRNA localizationQ35659747
Neuronal BC1 RNA: microtubule-dependent dendritic deliveryQ35689359
RNA transport in dendrites: a cis-acting targeting element is contained within neuronal BC1 RNAQ35747237
RNA transport and local control of translationQ35748358
Actin mRNA localizes in the absence of protein synthesisQ36224237
Beta-actin mRNA localization is regulated by signal transduction mechanismsQ36234607
Sequences responsible for intracellular localization of beta-actin messenger RNA also affect cell phenotypeQ36234755
beta-Actin messenger RNA localization and protein synthesis augment cell motilityQ36254690
Nuclear RNP complex assembly initiates cytoplasmic RNA localizationQ36321895
Two ZBP1 KH domains facilitate beta-actin mRNA localization, granule formation, and cytoskeletal attachmentQ36323096
Characterization of a beta-actin mRNA zipcode-binding proteinQ36567715
Intracellular trafficking of RNA in neuronsQ36630186
Multiple cis-acting targeting sequences are required for orb mRNA localization during Drosophila oogenesisQ36649318
The 3'-untranslated region of CaMKII alpha is a cis-acting signal for the localization and translation of mRNA in dendritesQ36690536
Identification of a target RNA motif for RNA-binding protein HuR.Q36853256
Complex formation between stage-specific oocyte factors and a Xenopus mRNA localization elementQ37046060
Dimerization of the 3'UTR of bicoid mRNA involves a two-step mechanismQ38295442
Neurotrophin-induced transport of a beta-actin mRNP complex increases beta-actin levels and stimulates growth cone motility.Q38297849
The suppression of testis-brain RNA binding protein and kinesin heavy chain disrupts mRNA sorting in dendrites.Q38319398
RNA-RNA interaction is required for the formation of specific bicoid mRNA 3' UTR-STAUFEN ribonucleoprotein particles.Q38347194
In yeast, the 3' untranslated region or the presequence of ATM1 is required for the exclusive localization of its mRNA to the vicinity of mitochondriaQ39456346
Mutational analysis of an RNA recognition element that mediates localization of bicoid mRNA.Q39575102
P433issue5
P407language of work or nameEnglishQ1860
P304page(s)625-42
P577publication date2007-05-01
P1433published inRNAQ7277164
P1476titleCis-acting determinants of asymmetric, cytoplasmic RNA transport
P478volume13

Reverse relations

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