scholarly article | Q13442814 |
P6179 | Dimensions Publication ID | 1023352199 |
P356 | DOI | 10.1186/1741-7007-3-2 |
P932 | PMC publication ID | 549206 |
P698 | PubMed publication ID | 15679890 |
P5875 | ResearchGate publication ID | 8051993 |
P50 | author | Merete Fredholm | Q28778502 |
Christian Bendixen | Q47007066 | ||
Mikkel Heide Schierup | Q30503071 | ||
P2093 | author name string | Henrik Hornshøj | |
Asger Hobolth | |||
Frank Grønlund Jørgensen | |||
P2860 | cites work | Slightly Deleterious Mutant Substitutions in Evolution | Q22122425 |
Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution | Q22122484 | ||
Genome sequence of the Brown Norway rat yields insights into mammalian evolution | Q22122498 | ||
Initial sequencing and comparative analysis of the mouse genome | Q22122521 | ||
CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice | Q24286950 | ||
PANTHER: a browsable database of gene products organized by biological function, using curated protein family and subfamily classification | Q24681693 | ||
Genealogical evidence for positive selection in the nef gene of HIV-1 | Q27473192 | ||
Codon-substitution models for heterogeneous selection pressure at amino acid sites | Q27473194 | ||
Evidence for positive selection in foot-and-mouth disease virus capsid genes from field isolates | Q27473197 | ||
A general empirical model of protein evolution derived from multiple protein families using a maximum-likelihood approach | Q27860716 | ||
Dating of the human-ape splitting by a molecular clock of mitochondrial DNA | Q27860908 | ||
PAML: a program package for phylogenetic analysis by maximum likelihood | Q27861096 | ||
Molecular phylogenetics and the origins of placental mammals | Q28201892 | ||
Resolution of the early placental mammal radiation using Bayesian phylogenetics | Q28211064 | ||
A likelihood approach for comparing synonymous and nonsynonymous nucleotide substitution rates, with application to the chloroplast genome | Q28241386 | ||
A codon-based model of nucleotide substitution for protein-coding DNA sequences | Q28241397 | ||
Rates of nucleotide substitution in primates and rodents and the generation-time effect hypothesis | Q28282820 | ||
The marsupial mitochondrial genome and the evolution of placental mammals | Q28769461 | ||
The pattern of mammalian evolution and the relative rate of molecular evolution | Q28769474 | ||
Molecular phylogeny of Rodentia, Lagomorpha, Primates, Artiodactyla, and Carnivora and molecular clocks | Q28775750 | ||
Rate constancy of globin gene evolution in placental mammals | Q28776646 | ||
Genome-scale approaches to resolving incongruence in molecular phylogenies | Q29547249 | ||
A molecular timescale for vertebrate evolution | Q29547791 | ||
Likelihood ratio tests for detecting positive selection and application to primate lysozyme evolution | Q29547828 | ||
Comparative analyses of multi-species sequences from targeted genomic regions | Q29614436 | ||
Inferring nonneutral evolution from human-chimp-mouse orthologous gene trios | Q29616015 | ||
Codon-substitution models for detecting molecular adaptation at individual sites along specific lineages | Q29618516 | ||
Protein evolution with dependence among codons due to tertiary structure. | Q30333235 | ||
Indels in protein-coding sequences of Euarchontoglires constrain the rooting of the eutherian tree | Q47739850 | ||
Revisiting the Glires concept--phylogenetic analysis of nuclear sequences | Q47739860 | ||
Large-scale search for genes on which positive selection may operate | Q48064461 | ||
Congruent Mammalian Trees from Mitochondrial and Nuclear Genes Using Bayesian Methods | Q57045404 | ||
Synonymous and nonsynonymous substitutions in mammalian genes and the nearly neutral theory | Q59411785 | ||
Tests for positive selection on immune and reproductive genes in closely related species of the murine genus mus | Q73069252 | ||
Adaptive evolution in the photosensory domain of phytochrome A in early angiosperms | Q73459266 | ||
Frequent false detection of positive selection by the likelihood method with branch-site models | Q79763451 | ||
Reanalysis of Murphy et al.'s data gives various mammalian phylogenies and suggests overcredibility of Bayesian trees | Q30910727 | ||
Rapid evolution in plant chitinases: molecular targets of selection in plant-pathogen coevolution. | Q31706725 | ||
Molecular evidence for the early divergence of placental mammals | Q33784258 | ||
Molecular dating and biogeography of the early placental mammal radiation. | Q33950412 | ||
Are combined analyses better than single gene phylogenies? A case study using SSU rDNA and rbcL sequence comparisons in the Zygnematophyceae (Streptophyta). | Q34291816 | ||
The complete mitochondrial genome of the wallaroo (Macropus robustus) and the phylogenetic relationship among Monotremata, Marsupialia, and Eutheria | Q34416729 | ||
Inference of selection from multiple species alignments | Q34998364 | ||
The loss of the hemoglobin H2S-binding function in annelids from sulfide-free habitats reveals molecular adaptation driven by Darwinian positive selection. | Q35022334 | ||
Maximum likelihood methods for detecting adaptive evolution after gene duplication. | Q35167155 | ||
An examination of the generation-time effect on molecular evolution | Q36667239 | ||
False-positive selection identified by ML-based methods: examples from the Sig1 gene of the diatom Thalassiosira weissflogii and the tax gene of a human T-cell lymphotropic virus | Q45667557 | ||
Phylogenetic estimation of context-dependent substitution rates by maximum likelihood | Q46754566 | ||
P433 | issue | 1 | |
P407 | language of work or name | English | Q1860 |
P921 | main subject | pig | Q787 |
domestication | Q11395 | ||
P304 | page(s) | 2 | |
P577 | publication date | 2005-01-01 | |
P1433 | published in | BMC Biology | Q2545642 |
P1476 | title | Comparative analysis of protein coding sequences from human, mouse and the domesticated pig | |
P478 | volume | 3 |
Q28764043 | A phylogenomic study of human, dog, and mouse |
Q37759974 | Advances in porcine genomics and proteomics--a toolbox for developing the pig as a model organism for molecular biomedical research |
Q33339383 | Assessing the evolutionary impact of amino acid mutations in the human genome |
Q42149039 | Breakpoint graphs and ancestral genome reconstructions |
Q30855591 | Causes and evolutionary consequences of primordial germ-cell specification mode in metazoans |
Q89567688 | Comparative analyses of longissimus muscle miRNAomes reveal microRNAs associated with differential regulation of muscle fiber development between Tongcheng and Yorkshire pigs |
Q40901852 | Construction of a pig physical interactome using sequence homology and a comprehensive reference human interactome |
Q44072920 | Dietary supplementation with Bifidobacterium lactis NCC2818 from weaning reduces local immunoglobulin production in lymphoid-associated tissues but increases systemic antibodies in healthy neonates. |
Q34509831 | Dissecting the role of milk components on gut microbiota composition |
Q33633479 | Estimates of positive Darwinian selection are inflated by errors in sequencing, annotation, and alignment. |
Q47842190 | Evidence of a major role of GP64 in group I alphabaculovirus evolution |
Q28757247 | Expressed sequence tags as a tool for phylogenetic analysis of placental mammal evolution |
Q33279940 | Genetic resources, genome mapping and evolutionary genomics of the pig (Sus scrofa) |
Q44706719 | High-resolution structural model of porcine P2 myelin membrane protein with associated fatty acid ligand: fact or artifact? |
Q28681285 | How to Make a Dolphin: Molecular Signature of Positive Selection in Cetacean Genome |
Q33286950 | Improving model predictions for RNA interference activities that use support vector machine regression by combining and filtering features |
Q33509926 | Molecular phylogeny of Arthrotardigrada (Tardigrada). |
Q35839904 | Neonatal colonisation expands a specific intestinal antigen-presenting cell subset prior to CD4 T-cell expansion, without altering T-cell repertoire |
Q36857726 | Pervasive positive selection on duplicated and nonduplicated vertebrate protein coding genes |
Q40499958 | Phenotypic and functional analysis of monocyte populations in cattle peripheral blood identifies a subset with high endocytic and allogeneic T-cell stimulatory capacity. |
Q57568122 | Phylogenetic analysis of 1.5 Mbp and platypus EST data refute the Marsupionta hypothesis and unequivocally support Monotremata as sister group to Marsupialia/Placentalia |
Q35179266 | PigGIS: Pig Genomic Informatics System |
Q24529105 | Pigs in sequence space: a 0.66X coverage pig genome survey based on shotgun sequencing |
Q42686049 | Prospecting for pig single nucleotide polymorphisms in the human genome: have we struck gold? |
Q36113710 | Pyoverdine receptor: a case of positive Darwinian selection in Pseudomonas aeruginosa |
Q28710006 | Sequencing of the needle transcriptome from Norway spruce (Picea abies Karst L.) reveals lower substitution rates, but similar selective constraints in gymnosperms and angiosperms |
Q37373110 | The effect of branch lengths on phylogeny: an empirical study using highly conserved orthologs from mammalian genomes |
Q47118296 | The evolution of the macrophage-specific enhancer (Fms intronic regulatory element) within the CSF1R locus of vertebrates |
Q33942626 | The evolutionary fate of MULE-mediated duplications of host gene fragments in rice |
Q34113617 | Towards the establishment of a porcine model to study human amebiasis |
Q33400860 | Transcriptomic and proteomic profiling of two porcine tissues using high-throughput technologies |
Q37719307 | Transgenic pigs as models for translational biomedical research |
Q42615818 | Two novel mouse genes mapped to chromosome Yp are expressed specifically in spermatids. |
Q36431667 | Up-regulated miR-145 expression inhibits porcine preadipocytes differentiation by targeting IRS1. |