Gene capture prediction and overlap estimation in EST sequencing from one or multiple libraries

scientific article

Gene capture prediction and overlap estimation in EST sequencing from one or multiple libraries is …
instance of (P31):
scholarly articleQ13442814

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P8978DBLP publication IDjournals/bmcbi/WangLCWMZd05
P6179Dimensions Publication ID1036501846
P356DOI10.1186/1471-2105-6-300
P932PMC publication ID1369009
P698PubMed publication ID16351717
P5875ResearchGate publication ID7417705

P50authorClaude W dePamphilisQ92093351
P2093author name stringLiying Cui
P Kerr Wall
Jiaxuan Zhang
Bruce G Lindsay
Ji-Ping Z Wang
Josh Marion
P2860cites workAnalysis of the genome sequence of the flowering plant Arabidopsis thalianaQ22122387
STACK: Sequence Tag Alignment and Consensus KnowledgebaseQ24604157
3,400 new expressed sequence tags identify diversity of transcripts in human brainQ28261851
Sequence identification of 2,375 human brain genesQ28283772
dbEST--database for "expressed sequence tags"Q29547785
A genomic view of alternative splicingQ29615892
Complementary DNA sequencing: expressed sequence tags and human genome projectQ29618255
Genome-wide detection of alternative splicing in expressed sequences of human genesQ29618541
Efficient discovery of single-nucleotide polymorphisms in coding regions of human genes.Q30331603
Mining SNPs from EST databasesQ30634765
The comparison of gene expression from multiple cDNA librariesQ30658168
Deductions about the number, organization, and evolution of genes in the tomato genome based on analysis of a large expressed sequence tag collection and selective genomic sequencingQ30837037
A large scale analysis of cDNA in Arabidopsis thaliana: generation of 12,028 non-redundant expressed sequence tags from normalized and size-selected cDNA librariesQ30887231
Single pass sequencing and physical and genetic mapping of human brain cDNAsQ30985371
Genome-wide detection of tissue-specific alternative splicing in the human transcriptomeQ31106050
Estimating and comparing the rates of gene discovery and expressed sequence tag (EST) frequencies in EST surveysQ33200784
EST clustering error evaluation and correctionQ33203653
Computational methods for the identification of differential and coordinated gene expression.Q33724059
A comprehensive approach to clustering of expressed human gene sequence: the sequence tag alignment and consensus knowledge base.Q33880935
Analysis of expressed sequence tags indicates 35,000 human genesQ33903985
d2_cluster: a validated method for clustering EST and full-length cDNAsequencesQ35025334
An optimized protocol for analysis of EST sequencesQ39584309
Generating consensus sequences from partial order multiple sequence alignment graphsQ43681053
Splicing graphs and EST assembly problemQ44095761
Gene index analysis of the human genome estimates approximately 120,000 genes.Q52077979
How many genes in the human genome?Q59315645
ESTablishing a human transcript mapQ72048152
P433issue1
P407language of work or nameEnglishQ1860
P304page(s)300
P577publication date2005-12-13
P1433published inBMC BioinformaticsQ4835939
P1476titleGene capture prediction and overlap estimation in EST sequencing from one or multiple libraries
P478volume6

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cites work (P2860)
Q36417448A Bayesian nonparametric method for prediction in EST analysis
Q33345579A blackberry (Rubus L.) expressed sequence tag library for the development of simple sequence repeat markers
Q33722268An ordered EST catalogue and gene expression profiles of cassava (Manihot esculenta) at key growth stages
Q33489077Comparison of next generation sequencing technologies for transcriptome characterization
Q28681948Computational and informatics strategies for identification of specific protein interaction partners in affinity purification mass spectrometry experiments
Q35926877Estimating T-cell repertoire diversity: limitations of classical estimators and a new approach
Q36023260Estimating species richness by a Poisson-compound gamma model
Q39097994Exploring the transcriptome of the burrowing nematode Radopholus similis.
Q33314847Expressed sequence tag analysis and development of gene associated markers in a near-isogenic plant system of Eragrostis curvula.
Q38510379Expressed sequence tags of the peanut pod nematode Ditylenchus africanus: the first transcriptome analysis of an Anguinid nematode
Q33667874High throughput sequencing reveals a complex pattern of dynamic interrelationships among human T cell subsets
Q35673108How Many Genes Are Expressed in a Transcriptome? Estimation and Results for RNA-Seq
Q24650344Ion channel gene expression in the inner ear
Q33419104RICHEST--a web server for richness estimation in biological data
Q33311610Sequencing analysis of 20,000 full-length cDNA clones from cassava reveals lineage specific expansions in gene families related to stress response.

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