Perspectives and Insights into the Competition for Aminoacyl-tRNAs between the Translational Machinery and for tRNA Dependent Non-Ribosomal Peptide Bond Formation

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Perspectives and Insights into the Competition for Aminoacyl-tRNAs between the Translational Machinery and for tRNA Dependent Non-Ribosomal Peptide Bond Formation is …
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scholarly articleQ13442814

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P356DOI10.3390/LIFE6010002
P8608Fatcat IDrelease_ux7fplxuebeidniuvqhzklsy3i
P932PMC publication ID4810233
P698PubMed publication ID26729173
P5875ResearchGate publication ID289489557

P50authorAngela W FungQ83282044
P2093author name stringRichard P Fahlman
Roshani Payoe
P2860cites workThe leucyl/phenylalanyl-tRNA-protein transferase. Overexpression and characterization of substrate recognition, domain structure, and secondary structureQ72017076
Twelve species of the nucleoid-associated protein from Escherichia coli. Sequence recognition specificity and DNA binding affinityQ73157405
Applying Arginylation for Bottom-Up ProteomicsQ85926490
Unexpectedly fast transfer of positron-emittable artificial substrate into N-terminus of peptide/protein mediated by wild-type L/F-tRNA-protein transferaseQ87221780
The RelA/SpoT homolog (RSH) superfamily: distribution and functional evolution of ppGpp synthetases and hydrolases across the tree of lifeQ21135259
Synthesis of Guanosine Tetra- and Pentaphosphate Requires the Presence of a Codon-Specific, Uncharged Transfer Ribonucleic Acid in the Acceptor Site of RibosomesQ24564295
The N-end rule pathwayQ24598290
Compilation of tRNA sequences and sequences of tRNA genesQ24793116
Conditional Tek promoter-driven deletion of arginyltransferase in the germ line causes defects in gametogenesis and early embryonic lethality in miceQ27335779
X-ray crystal structure of Staphylococcus aureus FemAQ27639499
Crystal structures of Weissella viridescens FemX and its complex with UDP-MurNAc-pentapeptide: insights into FemABX family substrates recognitionQ27643131
In vivo half-life of a protein is a function of its amino-terminal residueQ28287702
Thermodynamic characterization of ppGpp binding to EF-G or IF2 and of initiator tRNA binding to free IF2 in the presence of GDP, GTP, or ppGppQ28290627
Structures of two bacterial resistance factors mediating tRNA-dependent aminoacylation of phosphatidylglycerol with lysine or alanineQ28493059
N-terminal protein modification using simple aminoacyl transferase substratesQ30406776
High-throughput mass spectrometric discovery of protein post-translational modifications.Q30640679
Quantification of the post-translational addition of amino acids to proteins by MALDI-TOF mass spectrometry.Q30857554
ClpS is the recognition component for Escherichia coli substrates of the N-end rule degradation pathway.Q50598911
Co-variation of tRNA abundance and codon usage in Escherichia coli at different growth rates.Q52888301
Phosphorylation of elongation factor Tu prevents ternary complex formation.Q54008053
Probing the leucyl/phenylalanyl tRNA protein transferase active site with tRNA substrate analogues.Q54295194
Selective charging of tRNA isoacceptors explains patterns of codon usage.Q54523461
Transfer of methionyl residues by leucyl, phenylalanyl-tRNA-protein transferaseQ67489442
Utilization of isoaccepting leucyl-tRNA in the soluble incorporation system and protein synthesizing systems from E.coliQ69355923
The elongation factor Tu . guanosine tetraphosphate complexQ70166995
Methylation in vivo of elongation factor EF-Tu at lysine-56 decreases the rate of tRNA-dependent GTP hydrolysisQ70312207
ppGpp inhibition of elongation factors Tu, G and Ts during polypeptide synthesisQ70404037
Aminoacyl-tRNA recognition by the leucyl/phenylalanyl-tRNA-protein transferaseQ71514688
Just-in-time transcription program in metabolic pathwaysQ33202257
A novel form of neurotensin post-translationally modified by arginylationQ33221326
Arginyltransferase ATE1 catalyzes midchain arginylation of proteins at side chain carboxylates in vivoQ33566696
tRNAs as regulators of biological processesQ33737299
DNA protection by stress-induced biocrystallizationQ33867772
An alternative mechanism for the catalysis of peptide bond formation by L/F transferase: substrate binding and orientation.Q33885217
Fusidic acid-resistant EF-G perturbs the accumulation of ppGppQ33912678
Polyamines: mysterious modulators of cellular functionsQ33920552
The determination of tRNALeu recognition nucleotides for Escherichia coli L/F transferaseQ33929029
RGS4 and RGS5 are in vivo substrates of the N-end rule pathwayQ34085136
Differential arginylation of actin isoforms is regulated by coding sequence-dependent degradationQ34139712
Selective charging of tRNA isoacceptors induced by amino-acid starvationQ34166656
Peptide Acceptors in the Leucine, Phenylalanine Transfer ReactionQ34213812
A soluble enzyme from Escherichia coli which catalyzes the transfer of leucine and phenylalanine from tRNA to acceptor proteinsQ34221693
Structural basis for transcription regulation by alarmone ppGpp.Q34316432
Universality and structure of the N-end ruleQ34430814
Polyamines protect Escherichia coli cells from the toxic effect of oxygenQ34804453
The N-end rule in bacteria.Q34993240
Differential utilization of leucyl-tRNAs by Escherichia coliQ35017893
Alanyl-phosphatidylglycerol synthase: mechanism of substrate recognition during tRNA-dependent lipid modification in Pseudomonas aeruginosaQ35034095
The nucleotide-binding site of bacterial translation initiation factor 2 (IF2) as a metabolic sensorQ35080376
tRNA-dependent peptide bond formation by the transferase PacB in biosynthesis of the pacidamycin group of pentapeptidyl nucleoside antibioticsQ35134064
Single-molecule investigations of the stringent response machinery in living bacterial cellsQ35149470
Protein synthesis during cellular quiescence is inhibited by phosphorylation of a translational elongation factorQ35796219
Amino-terminal arginylation targets endoplasmic reticulum chaperone BiP for autophagy through p62 bindingQ35812368
Arginylation regulates purine nucleotide biosynthesis by enhancing the activity of phosphoribosyl pyrophosphate synthaseQ35856331
Arginylated calreticulin at plasma membrane increases susceptibility of cells to apoptosisQ36052477
The N-end rule pathway counteracts cell death by destroying proapoptotic protein fragmentsQ36079454
The N-end rule in Escherichia coli: cloning and analysis of the leucyl, phenylalanyl-tRNA-protein transferase gene aatQ36103007
Recent functional insights into the role of (p)ppGpp in bacterial physiologyQ36319374
A genetic locus for the regulation of ribonucleic acid synthesisQ36442193
RNA-dependent lipid remodeling by bacterial multiple peptide resistance factorsQ36534465
Investigations of valanimycin biosynthesis: elucidation of the role of seryl-tRNA.Q36638728
Killing of macrophages by anthrax lethal toxin: involvement of the N-end rule pathwayQ36817991
Polyamines in bacteria: pleiotropic effects yet specific mechanismsQ36983999
The Francisella tularensis migR, trmE, and cphA genes contribute to F. tularensis pathogenicity island gene regulation and intracellular growth by modulation of the stress alarmone ppGppQ37036014
The N-degradome of Escherichia coli: limited proteolysis in vivo generates a large pool of proteins bearing N-degronsQ37213857
Modification of PATase by L/F-transferase generates a ClpS-dependent N-end rule substrate in Escherichia coliQ37234965
Magic spot: (p) ppGppQ37458434
The plant N-end rule pathway: structure and functionsQ37772351
Posttranslational arginylation as a global biological regulatorQ37904336
The molecular basis for the post-translational addition of amino acids by L/F transferase in the N-end rule pathwayQ38360410
tRNA--the golden standard in molecular biologyQ38628517
Calreticulin-dimerization induced by post-translational arginylation is critical for stress granules scaffoldingQ39169417
Dependence of RelA-mediated (p)ppGpp formation on tRNA identityQ39575407
Regulation of bacterial ppGpp and pppGppQ39955411
tRNAs as primer of reverse transcriptasesQ40402097
Elevated guanosine 5'-diphosphate 3'-diphosphate level inhibits bacterial growth and interferes with FtsZ assembly.Q40451713
An essential role of N-terminal arginylation in cardiovascular developmentQ40720569
Growth rate dependence of transfer RNA abundance in Escherichia coliQ41237752
RelA-dependent (p)ppGpp production controls exoenzyme synthesis in Erwinia carotovora subsp. atrosepticaQ41762424
The ribosome triggers the stringent response by RelA via a highly distorted tRNAQ41809118
Positive allosteric feedback regulation of the stringent response enzyme RelA by its productQ41850367
Enzymatic generation of peptides flanked by basic amino acids to obtain MS/MS spectra with 2× sequence coverageQ42034532
Calreticulin and Arginylated Calreticulin Have Different Susceptibilities to Proteasomal DegradationQ42126098
Kinetic analysis of the leucyl/phenylalanyl-tRNA-protein transferase with acceptor peptides possessing different N-terminal penultimate residuesQ42544067
The C-terminal proteolytic fragment of the breast cancer susceptibility type 1 protein (BRCA1) is degraded by the N-end rule pathwayQ42605172
The NEXT-A (N-terminal EXtension with Transferase and ARS) reactionQ43277412
Charging levels of four tRNA species in Escherichia coli Rel(+) and Rel(-) strains during amino acid starvation: a simple model for the effect of ppGpp on translational accuracy.Q43556218
Two Compounds implicated in the Function of the RC Gene of Escherichia coliQ43606324
Dissection of the mechanism for the stringent factor RelA.Q44206960
Proteomic discovery of cellular substrates of the ClpXP protease reveals five classes of ClpX-recognition signalsQ44384522
Degradation of DIAP1 by the N-end rule pathway is essential for regulating apoptosis.Q44401479
Dynamic control of Dps protein levels by ClpXP and ClpAP proteases in Escherichia coliQ44570308
The degradation signal in a short-lived proteinQ45180905
On the role of an unusual tRNAGly isoacceptor in Staphylococcus aureus.Q45755014
Global dynamics of the Escherichia coli proteome and phosphoproteome during growth in minimal mediumQ45886058
CpgA, EF-Tu and the stressosome protein YezB are substrates of the Ser/Thr kinase/phosphatase couple, PrkC/PrpC, in Bacillus subtilisQ46107284
Promoter-specific control of E. coli RNA polymerase by ppGpp and a general transcription factorQ46145648
The N-end rule pathway as a nitric oxide sensor controlling the levels of multiple regulatorsQ46742633
Regulation of the Drosophila ubiquitin ligase DIAP1 is mediated via several distinct ubiquitin system pathwaysQ47072230
Chemoenzymatic transfer of fluorescent non-natural amino acids to the N terminus of a protein/peptideQ47920963
P275copyright licenseCreative Commons Attribution 4.0 InternationalQ20007257
P6216copyright statuscopyrightedQ50423863
P433issue1
P407language of work or nameEnglishQ1860
P304page(s)2
P577publication date2015-12-31
P1433published inLifeQ17064586
P1476titlePerspectives and Insights into the Competition for Aminoacyl-tRNAs between the Translational Machinery and for tRNA Dependent Non-Ribosomal Peptide Bond Formation
P478volume6

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Q39224176Self-Referential Encoding on Modules of Anticodon Pairs-Roots of the Biological Flow Systemcites workP2860

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