PyPedia: using the wiki paradigm as crowd sourcing environment for bioinformatics protocols

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PyPedia: using the wiki paradigm as crowd sourcing environment for bioinformatics protocols is …
instance of (P31):
scholarly articleQ13442814

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P8978DBLP publication IDjournals/scfbm/KanterakisKPS15
P6179Dimensions Publication ID1015519634
P356DOI10.1186/S13029-015-0042-6
P932PMC publication ID4652372
P698PubMed publication ID26587054
P5875ResearchGate publication ID284243501

P50authorMorris A SwertzQ57065320
P2093author name stringAlexandros Kanterakis
George Potamias
Joël Kuiper
P2860cites workMatplotlib: A 2D Graphics EnvironmentQ17278583
A flexible and accurate genotype imputation method for the next generation of genome-wide association studiesQ21129496
PyCogent: a toolkit for making sense from sequenceQ21184113
Git can facilitate greater reproducibility and increased transparency in scienceQ24273450
IPython: A System for Interactive Scientific ComputingQ24492861
Publish your computer code: it is good enoughQ24494587
A note on exact tests of Hardy-Weinberg equilibriumQ24531633
Biogem: an effective tool-based approach for scaling up open source software development in bioinformaticsQ24607601
MaCH: using sequence and genotype data to estimate haplotypes and unobserved genotypesQ24635938
Biopython: freely available Python tools for computational molecular biology and bioinformaticsQ24643426
The Gene Wiki: community intelligence applied to human gene annotationQ24644366
A unified approach to genotype imputation and haplotype-phase inference for large data sets of trios and unrelated individualsQ24644474
PLINK: a tool set for whole-genome association and population-based linkage analysesQ24677407
Data Sharing by Scientists: Practices and PerceptionsQ27826356
The case for open computer programsQ27921796
BioCatalogue: a universal catalogue of web services for the life sciencesQ27924933
pymzML--Python module for high-throughput bioinformatics on mass spectrometry dataQ28258857
The Genome of the Netherlands: design, and project goalsQ28660514
The 1000 Genomes Project: data management and community accessQ28730196
SNPedia: a wiki supporting personal genome annotation, interpretation and analysisQ28740978
BOWiki: an ontology-based wiki for annotation of data and integration of knowledge in biologyQ28754481
Genome re-annotation: a wiki solution?Q28763015
A wiki for the life sciences where authorship mattersQ28842736
Interactive notebooks: Sharing the codeQ28851715
Galaxy: a platform for interactive large-scale genome analysisQ29547494
The variant call format and VCFtoolsQ29614172
DendroPy: a Python library for phylogenetic computingQ29614993
Publish in Wikipedia or perishQ29999807
Pybedtools: a flexible Python library for manipulating genomic datasets and annotationsQ30429349
Imputation-based analysis of association studies: candidate regions and quantitative traitsQ30833155
Biskit--a software platform for structural bioinformaticsQ33269731
An active registry for bioinformatics web servicesQ33450158
GaggleBridge: collaborative data analysisQ33966709
Pyicos: a versatile toolkit for the analysis of high-throughput sequencing dataQ34047461
THE HARDY-WEINBERG LAW.Q34677364
Transcriptome sequencing reveals potential mechanism of cryptic 3' splice site selection in SF3B1-mutated cancersQ35577014
The impact of Docker containers on the performance of genomic pipelinesQ36102895
Collaborative authoring of biomedical terminologies using a semantic WikiQ38384590
Bioinformatics software for biologists in the genomics era.Q38448210
Reproducible research: a bioinformatics case studyQ38453401
Better bioinformatics through usability analysisQ48309422
Biological knowledge bases using Wikis: combining the flexibility of Wikis with the structure of databases.Q51683865
Wikipedia rival calls in the experts.Q55042535
Crowdsourcing systems on the World-Wide WebQ56804936
Computational science: ...ErrorQ59088849
Gene-function wiki would let biologists pool worldwide resourcesQ66692520
No second thoughts about data accessQ83975546
P4510describes a project that usescrowdsourcingQ275969
Jupyter notebook fileQ70357595
P433issue1
P407language of work or nameEnglishQ1860
P921main subjectwikiQ171
PythonQ28865
information systemQ121182
bioinformaticsQ128570
crowdsourcingQ275969
P6104maintained by WikiProjectWikiProject SoftwareQ15659621
P304page(s)14
P577publication date2015-01-01
P1433published inSource Code for Biology and MedicineQ22661195
P1476titlePyPedia: using the wiki paradigm as crowd sourcing environment for bioinformatics protocols
P478volume10

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cites work (P2860)
Q28601261BioShaDock: a community driven bioinformatics shared Docker-based tools registry
Q49932047What incentives increase data sharing in health and medical research? A systematic review

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