Crystal structure of a p53 core tetramer bound to DNA

scientific article

Crystal structure of a p53 core tetramer bound to DNA is …
instance of (P31):
scholarly articleQ13442814

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P6179Dimensions Publication ID1052650140
P356DOI10.1038/ONC.2008.400
P932PMC publication ID2629805
P698PubMed publication ID18978813
P5875ResearchGate publication ID23446235

P2093author name stringR Marmorstein
W C Ho
K A Malecka
P2860cites workHow p53 binds DNA as a tetramerQ41787604
High thermostability and lack of cooperative DNA binding distinguish the p63 core domain from the homologous tumor suppressor p53.Q43690426
Sequence-dependent kinks induced in curved DNA.Q44153316
Structural basis for p53 binding-induced DNA bendingQ47600672
Cooperative binding of tetrameric p53 to DNA.Q51629222
Structural basis of DNA recognition by p53 tetramers.Q53616174
Mutational analysis of the p53 core domain L1 loop.Q53623512
Trapping distinct structural states of a protein/DNA interaction through disulfide crosslinking.Q53946420
CA/TG sequence at the 5' end of oligo(A)-tracts strongly modulates DNA curvatureQ72287827
ExPASy: The proteomics server for in-depth protein knowledge and analysisQ24672230
Processing of X-ray diffraction data collected in oscillation modeQ26778468
Crystal structure of the mouse p53 core DNA-binding domain at 2.7 A resolutionQ27629230
Structure of the human p53 core domain in the absence of DNAQ27643922
Crystal structure of the tetramerization domain of the p53 tumor suppressor at 1.7 angstromsQ27730393
Crystal structure of a p53 tumor suppressor-DNA complex: understanding tumorigenic mutationsQ27730815
Structure of a covalently trapped catalytic complex of HIV-1 reverse transcriptase: implications for drug resistanceQ27766086
Coot: model-building tools for molecular graphicsQ27860505
3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structuresQ27860547
ESPript: analysis of multiple sequence alignments in PostScriptQ27860708
Definition of a consensus binding site for p53Q28207794
Four p53 DNA-binding domain peptides bind natural p53-response elements and bend the DNA.Q33912006
Structure of a repair enzyme interrogating undamaged DNA elucidates recognition of damaged DNA.Q34407601
Sequence-specific transcriptional activation is essential for growth suppression by p53.Q35086763
Covalent trapping of protein-DNA complexesQ35550685
Coping with stress: multiple ways to activate p53.Q36745375
p53-induced DNA bending and twisting: p53 tetramer binds on the outer side of a DNA loop and increases DNA twistingQ37161582
p53-Induced DNA bending: the interplay between p53-DNA and p53-p53 interactionsQ37370175
Static and statistical bending of DNA evaluated by Monte Carlo simulationsQ37575367
Structure of the p53 core domain dimer bound to DNA.Q38313002
Structure of a DNA glycosylase searching for lesionsQ38315509
DNA bending is essential for the site-specific recognition of DNA response elements by the DNA binding domain of the tumor suppressor protein p53.Q38345163
Architectural accommodation in the complex of four p53 DNA binding domain peptides with the p21/waf1/cip1 DNA response elementQ38345165
P433issue3
P407language of work or nameEnglishQ1860
P921main subjectcrystal structureQ895901
P304page(s)325-33
P577publication date2009-01-22
P1433published inOncogeneQ1568657
P1476titleCrystal structure of a p53 core tetramer bound to DNA
P478volume28

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cites work (P2860)
Q34354855A historical account of Hoogsteen base-pairs in duplex DNA.
Q24300449An induced fit mechanism regulates p53 DNA binding kinetics to confer sequence specificity
Q37631792Bioinformatic analysis of the protein/DNA interface.
Q48243773Characterization of an Hsp90-Independent Interaction between Co-Chaperone p23 and Transcription Factor p53.
Q24628577Computational identification of a transiently open L1/S3 pocket for reactivation of mutant p53
Q33486476Cooperativity dominates the genomic organization of p53-response elements: a mechanistic view
Q27659877Crystal Structure of the p53 Core Domain Bound to a Full Consensus Site as a Self-Assembled Tetramer
Q36620746Crystal structures of the DNA-binding domain tetramer of the p53 tumor suppressor family member p73 bound to different full-site response elements
Q58580342Defining TP53 pioneering capabilities with competitive nucleosome binding assays
Q47799271Diverse p53/DNA binding modes expand the repertoire of p53 response elements
Q27660418Diversity in DNA recognition by p53 revealed by crystal structures with Hoogsteen base pairs
Q34490497Electron microscopy studies on the quaternary structure of p53 reveal different binding modes for p53 tetramers in complex with DNA
Q58002296Four p(53)s in a pod
Q33720701Increasing occurrences and functional roles for high energy purine-pyrimidine base-pairs in nucleic acids
Q92740620Liquid-like droplet formation by tumor suppressor p53 induced by multivalent electrostatic interactions between two disordered domains
Q36221831Low-level p53 expression changes transactivation rules and reveals superactivating sequences
Q33654183Lysine120 interactions with p53 response elements can allosterically direct p53 organization
Q27676758Pliable DNA Conformation of Response Elements Bound to Transcription Factor p63
Q38785911Protein-Protein Interface and Disease: Perspective from Biomolecular Networks
Q38855681Quaternary structure of the specific p53-DNA complex reveals the mechanism of p53 mutant dominance
Q36449409Radioprobing the conformation of DNA in a p53-DNA complex
Q37518662Rotational positioning of nucleosomes facilitates selective binding of p53 to response elements associated with cell cycle arrest
Q96962076S2 Subunit of SARS-nCoV-2 Interacts with Tumor Suppressor Protein p53 and BRCA: an In Silico Study
Q42701104Sequence-dependent cooperative binding of p53 to DNA targets and its relationship to the structural properties of the DNA targets
Q47428946Site-Specific Disulfide Crosslinked Nucleosomes with Enhanced Stability
Q38811603Structural Evolution and Dynamics of the p53 Proteins.
Q27679121Structural studies of p53 inactivation by DNA-contact mutations and its rescue by suppressor mutations via alternative protein-DNA interactions
Q42256579Structure and Function of p53-DNA Complexes with Inactivation and Rescue Mutations: A Molecular Dynamics Simulation Study
Q27678998Structure of p53 binding to the BAX response element reveals DNA unwinding and compression to accommodate base-pair insertion
Q27678316Structure of p73 DNA-binding domain tetramer modulates p73 transactivation
Q27667425Structures of p63 DNA binding domain in complexes with half-site and with spacer-containing full response elements
Q37808944The missing Zinc: p53 misfolding and cancer
Q33787947The p53 Transcriptional Network Influences Microglia Behavior and Neuroinflammation
Q84532001The p53 transcriptional synapse: activation on demand
Q37762069The tumor suppressor p53: from structures to drug discovery
Q34100529Tracing the protectors path from the germ line to the genome
Q27679224Transactivation specificity is conserved among p53 family proteins and depends on a response element sequence code
Q47792967Vinylsulfonamide and acrylamide modification of DNA for cross-linking with proteins

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