Visualizing ATP-Dependent RNA Translocation by the NS3 Helicase from HCV

scientific article

Visualizing ATP-Dependent RNA Translocation by the NS3 Helicase from HCV is …
instance of (P31):
scholarly articleQ13442814

External links are
P356DOI10.1016/J.JMB.2010.11.034
P932PMC publication ID3134248
P698PubMed publication ID21145896
P5875ResearchGate publication ID49671853

P50authorKatherine M. BrendzaQ110451412
P2093author name stringRobert Anderson
Ruth Wang
Anna M Pyle
John R Somoza
Olga Fedorova
Todd C Appleby
Xiaohong Liu
P2860cites workThe structure of bovine F1-ATPase inhibited by ADP and beryllium fluorideQ24563126
Two related superfamilies of putative helicases involved in replication, recombination, repair and expression of DNA and RNA genomesQ24635818
ATP hydrolysis is required for DEAD-box protein recycling but not for duplex unwindingQ24646651
Processing of X-ray diffraction data collected in oscillation modeQ26778468
Structure-based mutagenesis study of hepatitis C virus NS3 helicaseQ27469735
Structure-Based Mutational Analysis of the Hepatitis C Virus NS3 HelicaseQ27469958
Stimulation of hepatitis C virus (HCV) nonstructural protein 3 (NS3) helicase activity by the NS3 protease domain and by HCV RNA-dependent RNA polymeraseQ27470016
The hepatitis C viral NS3 protein is a processive DNA helicase with cofactor enhanced RNA unwindingQ27472668
Hepatitis C virus subgenomic replicon requires an active NS3 RNA helicaseQ27472781
Role of Divalent Metal Cations in ATP Hydrolysis Catalyzed by the Hepatitis C Virus NS3 Helicase: Magnesium Provides a Bridge for ATP to Fuel UnwindingQ27478187
Mutational analysis of the hepatitis C virus RNA helicaseQ27485864
Both NS3 and NS4A are required for proteolytic processing of hepatitis C virus nonstructural proteinsQ27485988
Nonstructural protein 3 of the hepatitis C virus encodes a serine-type proteinase required for cleavage at the NS3/4 and NS4/5 junctionsQ27486051
Hepatitis C virus NS3 protein polynucleotide-stimulated nucleoside triphosphatase and comparison with the related pestivirus and flavivirus enzymesQ27486070
Insights into RNA unwinding and ATP hydrolysis by the flavivirus NS3 proteinQ27487462
The NS4A Protein of Hepatitis C Virus Promotes RNA-Coupled ATP Hydrolysis by the NS3 HelicaseQ27488207
Three conformational snapshots of the hepatitis C virus NS3 helicase reveal a ratchet translocation mechanismQ27490905
Crystal structures of complexes of PcrA DNA helicase with a DNA substrate indicate an inchworm mechanismQ27617870
Molecular views of viral polyprotein processing revealed by the crystal structure of the hepatitis C virus bifunctional protease-helicaseQ27620480
Crystal structure and biochemical analysis of the MutS.ADP.beryllium fluoride complex suggests a conserved mechanism for ATP interactions in mismatch repairQ27640487
UvrD helicase unwinds DNA one base pair at a time by a two-part power strokeQ27640956
Mechanistic basis of 5'-3' translocation in SF1B helicasesQ27655717
X-ray structures of the myosin motor domain of Dictyostelium discoideum complexed with MgADP.BeFx and MgADP.AlF4-Q27729777
Structure of the hepatitis C virus RNA helicase domainQ27739123
Hepatitis C virus NS3 RNA helicase domain with a bound oligonucleotide: the crystal structure provides insights into the mode of unwindingQ27748908
Crystal structure of RNA helicase from genotype 1b hepatitis C virus. A feasible mechanism of unwinding duplex RNAQ27758298
Coot: model-building tools for molecular graphicsQ27860505
Characterization and mutational analysis of the helicase and NTPase activities of hepatitis C virus full-length NS3 proteinQ28372182
Systematic analysis of domain motions in proteins from conformational change: new results on citrate synthase and T4 lysozymeQ29547923
DEAD-box proteins: the driving forces behind RNA metabolismQ29619863
The prevalence of hepatitis C virus infection in the United States, 1999 through 2002Q29619974
C-terminal domain of the hepatitis C virus NS3 protein contains an RNA helicase activityQ29620775
Structure and function of hepatitis C virus NS3 helicaseQ33791631
The hepatitis C virus NS3 protein: a model RNA helicase and potential drug targetQ34607601
An expanding family of helicases within the 'DEAD/H' superfamilyQ34969293
A physical model for the translocation and helicase activities of Escherichia coli transcription termination protein RhoQ36488402
The nonstructural protein 3 protease/helicase requires an intact protease domain to unwind duplex RNA efficientlyQ36607807
Two novel conserved motifs in the hepatitis C virus NS3 protein critical for helicase actionQ36607832
Mechanisms of nucleic acid translocases: lessons from structural biology and single-molecule biophysicsQ36678126
Translocation and unwinding mechanisms of RNA and DNA helicasesQ37197989
Structural and biological identification of residues on the surface of NS3 helicase required for optimal replication of the hepatitis C virusQ38318511
Synthesis, deprotection, analysis and purification of RNA and ribozymesQ40394960
The hepatitis C virus: overviewQ41598727
Spring-loaded mechanism of DNA unwinding by hepatitis C virus NS3 helicaseQ42159743
Scope of worldwide hepatitis C problemQ42980924
A Brownian motor mechanism of translocation and strand separation by hepatitis C virus helicaseQ42991620
Expression, isolation, and characterization of the hepatitis C virus ATPase/RNA helicaseQ43034914
The serine protease domain of hepatitis C viral NS3 activates RNA helicase activity by promoting the binding of RNA substrateQ43041225
Characterization of RNA binding activity and RNA helicase activity of the hepatitis C virus NS3 proteinQ45769053
Poly(U) binding activity of hepatitis C virus NS3 protein, a putative RNA helicaseQ45790268
Molecular replacement by evolutionary search.Q52054861
Escherichia coli rep helicase unwinds DNA by an active mechanismQ70466136
Building a kinetic framework for group II intron ribozyme activity: quantitation of interdomain binding and reaction rateQ72266658
P433issue5
P407language of work or nameEnglishQ1860
P921main subjectvisualizationQ451553
P304page(s)1139-53
P577publication date2011-02-04
P1433published inJournal of Molecular BiologyQ925779
P1476titleVisualizing ATP-Dependent RNA Translocation by the NS3 Helicase from HCV
P478volume405