Neisseria conserved hypothetical protein DMP12 is a DNA mimic that binds to histone-like HU protein

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Neisseria conserved hypothetical protein DMP12 is a DNA mimic that binds to histone-like HU protein is …
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scholarly articleQ13442814

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P356DOI10.1093/NAR/GKT201
P932PMC publication ID3643605
P698PubMed publication ID23531546
P5875ResearchGate publication ID236083160

P50authorAndrew H.-J. WangQ10414373
Tzu-Ping KoQ89297766
P2093author name stringHao-Ching Wang
Mao-Lun Wu
P2860cites workComplete Genome Sequence of Neisseria meningitidis Serogroup B Strain MC58Q22065549
Complete DNA sequence of a serogroup A strain of Neisseria meningitidis Z2491Q22122399
Comparative genome biology of a serogroup B carriage and disease strain supports a polygenic nature of meningococcal virulenceQ39667409
DNA binding mode transitions of Escherichia coli HU(alphabeta): evidence for formation of a bent DNA--protein complex on intact, linear duplex DNA.Q41955635
High-resolution X-ray structure of the DNA-binding protein HU from the hyper-thermophilic Thermotoga maritima and the determinants of its thermostabilityQ43032809
HU-alpha binds to the putative double-stranded DNA mimic HI1450 from Haemophilus influenzaeQ43057978
Meningococcal biofilm growth on an abiotic surface - a model for epithelial colonization?Q45282562
The high-resolution structure of DNA-binding protein HU from Bacillus stearothermophilusQ74629622
Differential binding of the Escherichia coli HU, homodimeric forms and heterodimeric form to linear, gapped and cruciform DNAQ74637667
Processing of X-ray diffraction data collected in oscillation modeQ26778468
Protein mimicry of DNA from crystal structures of the uracil-DNA glycosylase inhibitor protein and its complex with Escherichia coli uracil-DNA glycosylaseQ27617562
Structure of Ocr from bacteriophage T7, a protein that mimics B-form DNAQ27637438
Flexible DNA bending in HU-DNA cocrystal structuresQ27641656
Solution structure of the highly acidic protein HI1450 from Haemophilus influenzae, a putative double-stranded DNA mimicQ27643051
NMR structure of chaperone Chz1 complexed with histones H2A.Z-H2BQ27651273
White spot syndrome virus protein ICP11: A histone-binding DNA mimic that disrupts nucleosome assemblyQ27653182
Extensive DNA mimicry by the ArdA anti-restriction protein and its role in the spread of antibiotic resistanceQ27655819
The crystal structure of NGO0477 from Neisseria gonorrhoeae reveals a novel protein fold incorporating a helix-turn-helix motifQ27660086
A bacterial antirepressor with SH3 domain topology mimics operator DNA in sequestering the repressor DNA recognition helixQ27660705
Neisseria conserved protein DMP19 is a DNA mimic protein that prevents DNA binding to a hypothetical nitrogen-response transcription factorQ27677523
Coot: model-building tools for molecular graphicsQ27860505
REFMAC5 dictionary: organization of prior chemical knowledge and guidelines for its useQ27860632
Phasercrystallographic softwareQ27860930
The Buccaneer software for automated model building. 1. Tracing protein chainsQ27860979
The CCP4 suite: programs for protein crystallographyQ27861090
Automated MAD and MIR structure solutionQ27861114
Intrinsically disordered proteinQ28191444
The bacterial nucleoid: a highly organized and dynamic structureQ28259177
Binding and cleavage of E. coli HUbeta by the E. coli Lon proteaseQ33568312
A fluoroquinolone resistance protein from Mycobacterium tuberculosis that mimics DNA.Q33987554
Nucleoid remodeling by an altered HU protein: reorganization of the transcription programQ34132393
Lon-dependent regulation of the DNA binding protein HU in Escherichia coliQ34309898
Regulation of gene expression by histone-like proteins in bacteria.Q35097677
Gene order and chromosome dynamics coordinate spatiotemporal gene expression during the bacterial growth cycleQ35673712
DnaJ (Hsp40 protein) binding to folded substrate impacts KplE1 prophage excision efficiencyQ35922218
Comparative overview of the genomic and genetic differences between the pathogenic Neisseria strains and species.Q36197651
Protein mimicry of DNA and pathway regulationQ36287050
DNA mimicry by proteins and the control of enzymatic activity on DNA.Q36525377
Bacterial nucleoid-associated proteins, nucleoid structure and gene expressionQ37688895
Functional evolution of bacterial histone-like HU proteins.Q37756442
Histone chaperones: modulators of chromatin marksQ37848526
Prediction of hydrodynamic and other solution properties of rigid proteins from atomic- and residue-level modelsQ38492496
P275copyright licenseCreative Commons Attribution-NonCommercial 3.0 UnportedQ18810331
P6216copyright statuscopyrightedQ50423863
P433issue9
P407language of work or nameEnglishQ1860
P304page(s)5127-38
P577publication date2013-05-01
P1433published inNucleic Acids ResearchQ135122
P1476titleNeisseria conserved hypothetical protein DMP12 is a DNA mimic that binds to histone-like HU protein
P478volume41

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cites work (P2860)
Q27681785A DNA Mimic: The Structure and Mechanism of Action for the Anti-Repressor Protein AbbA
Q36425607De novo design of protein mimics of B-DNA
Q37672913Pathogens hijack the epigenome: a new twist on host-pathogen interactions.
Q38262589Squaring up to DNA: pentapeptide repeat proteins and DNA mimicry
Q27680428Staphylococcus aureus protein SAUGI acts as a uracil-DNA glycosylase inhibitor
Q40822492Structural D/E-rich repeats play multiple roles especially in gene regulation through DNA/RNA mimicry
Q30365649The T4 phage DNA mimic protein Arn inhibits the DNA binding activity of the bacterial histone-like protein H-NS.
Q47093731The monomeric form of Neisseria DNA mimic protein DMP19 prevents DNA from binding to the histone-like HU protein
Q36914628Using structural-based protein engineering to modulate the differential inhibition effects of SAUGI on human and HSV uracil DNA glycosylase

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