Uncommon deletions of the Smith-Magenis syndrome region can be recurrent when alternate low-copy repeats act as homologous recombination substrates

scientific article

Uncommon deletions of the Smith-Magenis syndrome region can be recurrent when alternate low-copy repeats act as homologous recombination substrates is …
instance of (P31):
scholarly articleQ13442814
case reportQ2782326

External links are
P356DOI10.1086/422016
P3181OpenCitations bibliographic resource ID2722489
P932PMC publication ID1182010
P698PubMed publication ID15148657
P5875ResearchGate publication ID8556891

P50authorJames R. LupskiQ6141679
P2093author name stringChristine J Shaw
Marjorie A Withers
P2860cites workGenes in a refined Smith-Magenis syndrome critical deletion interval on chromosome 17p11.2 and the syntenic region of the mouseQ24672496
Genome architecture, rearrangements and genomic disordersQ29614721
Alu repeats and human diseaseQ29618262
Genome architecture catalyzes nonrecurrent chromosomal rearrangementsQ33904646
Reciprocal crossovers and a positional preference for strand exchange in recombination events resulting in deletion or duplication of chromosome 17p11.2.Q33905308
Genetic proof of unequal meiotic crossovers in reciprocal deletion and duplication of 17p11.2.Q34353994
Human meiotic recombination products revealed by sequencing a hotspot for homologous strand exchange in multiple HNPP deletion patientsQ34385379
Homologous recombination of a flanking repeat gene cluster is a mechanism for a common contiguous gene deletion syndromeQ34441884
The role of Alu repeat clusters as mediators of recurrent chromosomal aberrations in tumorsQ34804028
Molecular analysis of the Smith-Magenis syndrome: a possible contiguous-gene syndrome associated with del(17)(p11.2).Q35204512
Characterization of recombination in the HLA class II region.Q35238365
Comparative genomic hybridisation using a proximal 17p BAC/PAC array detects rearrangements responsible for four genomic disordersQ35444636
Molecular mapping of a recombination hotspot located in the second intron of the human TAP2 locusQ35642967
Implications of human genome architecture for rearrangement-based disorders: the genomic basis of diseaseQ35649549
Eukaryotic topoisomerase II preferentially cleaves alternating purine-pyrimidine repeatsQ35825156
(dT-dC)n and (dG-dA)n tracts arrest single stranded DNA replication in vitroQ35864526
Molecular analyses of 17p11.2 deletions in 62 Smith-Magenis syndrome patientsQ35881635
Unusual sequence element found at the end of an ampliconQ36844088
Intramolecular DNA triplexes: unusual sequence requirements and influence on DNA polymerizationQ37322500
Translocation and gross deletion breakpoints in human inherited disease and cancer I: Nucleotide composition and recombination-associated motifsQ38351157
One short well conserved region of Alu-sequences is involved in human gene rearrangements and has homology with prokaryotic chi.Q40392697
The biology of left-handed Z-DNA.Q41004906
DNA H form requires a homopurine-homopyrimidine mirror repeat.Q41333032
Mutational mechanisms of Williams-Beuren syndrome deletionsQ41897140
A recombination hotspot responsible for two inherited peripheral neuropathies is located near a mariner transposon-like element.Q48066076
Variability in clinical phenotype despite common chromosomal deletion in Smith-Magenis syndrome [del(17)(p11.2p11.2)]Q48611267
Refinement of the Smith-Magenis syndrome critical region to approximately 950kb and assessment of 17p11.2 deletions. Are all deletions created equally?Q51948225
Homologous DNA Exchanges in Humans Can Be Explained by the Yeast Double-Strand Break Repair Model: A Study of 17p11.2 Rearrangements Associated with CMT1A and HNPPQ58184692
Facile transition of poly[d(TG)·d(CA)] into a left-handed helix in physiological conditionsQ59054191
Effect of Z-DNA on nucleosome placementQ69450403
A pH-dependent structural transition in the homopurine-homopyrimidine tract in superhelical DNAQ69936025
Transcriptional block caused by a negative supercoiling induced structural change in an alternating CG sequenceQ70077678
Recombination hotspot in NF1 microdeletion patientsQ74147626
Genomic disorders: structural features of the genome can lead to DNA rearrangements and human disease traitsQ77572380
P433issue1
P407language of work or nameEnglishQ1860
P921main subjectSmith-Magenis syndromeQ2295338
P304page(s)75-81
P577publication date2004-07-01
P1433published inAmerican Journal of Human GeneticsQ4744249
P1476titleUncommon deletions of the Smith-Magenis syndrome region can be recurrent when alternate low-copy repeats act as homologous recombination substrates
P478volume75

Reverse relations

cites work (P2860)
Q24683002Characterization of Potocki-Lupski syndrome (dup(17)(p11.2p11.2)) and delineation of a dosage-sensitive critical interval that can convey an autism phenotype
Q57263663Characterization of the nonallelic homologous recombination hotspot PRS3 associated with type-3NF1deletions
Q35880845Complex chromosome 17p rearrangements associated with low-copy repeats in two patients with congenital anomalies
Q41766829Copy number variation at the breakpoint region of isochromosome 17q.
Q52029695Copy number variation in regions flanked (or unflanked) by duplicons among patients with developmental delay and/or congenital malformations; detection of reciprocal and partial Williams-Beuren duplications.
Q41611996DNA recombination. Recombination initiation maps of individual human genomes
Q51915729Evidence for involvement of TRE-2 (USP6) oncogene, low-copy repeat and acrocentric heterochromatin in two families with chromosomal translocations.
Q33844453Evolution in health and medicine Sackler colloquium: Genomic disorders: a window into human gene and genome evolution
Q36071991Failure to detect an 8p22-8p23.1 duplication in patients with Kabuki (Niikawa-Kuroki) syndrome
Q35286506Frequency of nonallelic homologous recombination is correlated with length of homology: evidence that ectopic synapsis precedes ectopic crossing-over
Q33805828From microscopes to microarrays: dissecting recurrent chromosomal rearrangements
Q21145278Genomic disorders: molecular mechanisms for rearrangements and conveyed phenotypes
Q36863512Genomic rearrangements and sporadic disease
Q37160463Germline rates of de novo meiotic deletions and duplications causing several genomic disorders
Q24809343Hotspots of homologous recombination in the human genome: not all homologous sequences are equal
Q33938790Identification of a 3.0-kb major recombination hotspot in patients with Sotos syndrome who carry a common 1.9-Mb microdeletion
Q37383603Identification of a RAI1-associated disease network through integration of exome sequencing, transcriptomics, and 3D genomics.
Q33708568Identification of uncommon recurrent Potocki-Lupski syndrome-associated duplications and the distribution of rearrangement types and mechanisms in PTLS
Q53305151Intrachromosomal mitotic nonallelic homologous recombination is the major molecular mechanism underlying type-2 NF1 deletions.
Q42217484Low copy repeats mediate distal chromosome 22q11.2 deletions: sequence analysis predicts breakpoint mechanisms
Q36975128Mechanisms for human genomic rearrangements
Q35448081Multiple mechanisms are implicated in the generation of 5q35 microdeletions in Sotos syndrome.
Q80962747Non-recurrent 17p11.2 deletions are generated by homologous and non-homologous mechanisms
Q34705135Phenotypic manifestations of copy number variation in chromosome 16p13.11.
Q37784332Phenotypic variability and genetic susceptibility to genomic disorders
Q37135729Recurrent reciprocal deletions and duplications of 16p13.11: the deletion is a risk factor for MR/MCA while the duplication may be a rare benign variant.
Q52594179Review of disrupted sleep patterns in Smith-Magenis syndrome and normal melatonin secretion in a patient with an atypical interstitial 17p11.2 deletion.
Q37600502Serial segmental duplications during primate evolution result in complex human genome architecture
Q28266475Smith-Magenis syndrome
Q37872382Smith-Magenis syndrome: haploinsufficiency of RAI1 results in altered gene regulation in neurological and metabolic pathways
Q61548983Uncommon Alu-mediated NF1 microdeletion with a breakpoint inside the NF1 gene

Search more.