TCM Database@Taiwan: the world's largest traditional Chinese medicine database for drug screening in silico

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TCM Database@Taiwan: the world's largest traditional Chinese medicine database for drug screening in silico is …
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scholarly articleQ13442814

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P819ADS bibcode2011PLoSO...615939C
P356DOI10.1371/JOURNAL.PONE.0015939
P3181OpenCitations bibliographic resource ID935783
P932PMC publication ID3017089
P698PubMed publication ID21253603
P5875ResearchGate publication ID49773129

P50authorCalvin Yu-Chian ChenQ43177425
P2093author name stringCalvin Yu-Chian Chen
P2860cites workFunctionality pattern matching as an efficient complementary structure/reaction search tool: an open-source approachQ84748533
Database resources of the National Center for Biotechnology InformationQ24644775
ZINC--a free database of commercially available compounds for virtual screeningQ27656255
TCMGeneDIT: a database for associated traditional Chinese medicine, gene and disease information using text miningQ33375861
Virtual screening and drug design for PDE-5 receptor from traditional Chinese medicine databaseQ33525137
Database of traditional Chinese medicine and its application to studies of mechanism and to prescription validationQ36054344
Structure-based and ligand-based drug design for HER 2 receptorQ43061745
Insights into designing the dual-targeted HER2/HSP90 inhibitorsQ43062815
Ligand-based dual target drug design for H1N1: swine flu--a preliminary first studyQ45239894
A 3D structure database of components from Chinese traditional medicinal herbsQ47439107
Computational screening and design of traditional Chinese medicine (TCM) to block phosphodiesterase-5.Q47442718
Traditional Chinese medicine database and application on the Web.Q47632184
P275copyright licenseCreative Commons Attribution 4.0 InternationalQ20007257
P6216copyright statuscopyrightedQ50423863
P433issue1
P407language of work or nameEnglishQ1860
P921main subjectin silicoQ192572
databaseQ8513
traditional Chinese medicineQ200253
drug screeningQ10505555
P304page(s)e15939
P577publication date2011-01-06
P1433published inPLOS OneQ564954
P1476titleTCM Database@Taiwan: the world's largest traditional Chinese medicine database for drug screening in silico
P478volume6

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cites work (P2860)
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Q33736326Finding inhibitors of mutant superoxide dismutase-1 for amyotrophic lateral sclerosis therapy from traditional chinese medicine
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Q44806080Han ethnicity-specific type 2 diabetic treatment from traditional Chinese medicine?
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Q35652477Identification of ALK5 inhibitor via structure-based virtual screening and ADMET prediction
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Q47109280Identification of Potent Chloride Intracellular Channel Protein 1 Inhibitors from Traditional Chinese Medicine through Structure-Based Virtual Screening and Molecular Dynamics Analysis
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Q28477481Identification of potent EGFR inhibitors from TCM Database@Taiwan
Q39993258Identification of tyrosinase inhibitors from traditional Chinese medicines for the management of hyperpigmentation
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Q33614632In Silico Investigation of Potential PARP-1 Inhibitors from Traditional Chinese Medicine.
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Q28483629In silico identification of potent pancreatic triacylglycerol lipase inhibitors from traditional Chinese medicine
Q28481644In silico investigation of potential SRC kinase ligands from traditional Chinese medicine
Q33893880In silico investigation of potential TRAF6 inhibitor from traditional Chinese medicine against cancers
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Q33862420Insight into HIV of IFN-induced myxovirus resistance 2 (MX2) expressed by traditional Chinese medicine
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Q92602221Network Pharmacology Identifies the Mechanisms of Action of Shaoyao Gancao Decoction in the Treatment of Osteoarthritis
Q38510631Network pharmacology applications to map the unexplored target space and therapeutic potential of natural products
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Q89553908Network pharmacology-based study on the mechanism of Yiganling capsule in hepatitis B treatment
Q38243629Network pharmacology: a Rosetta Stone for traditional Chinese medicine
Q36900056Network pharmacology: a new approach for chinese herbal medicine research
Q90382822Neuroblastoma SH-SY5Y cytotoxicity, anti-amyloidogenic activity and cyclooxygenase inhibition of Lasianthus trichophlebus (Rubiaceae)
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Q90421142Oleanolic Acids Inhibit Vascular Endothelial Growth Factor Receptor 2 Signaling in Endothelial Cells: Implication for Anti-Angiogenic Therapy
Q30487721Open-access metabolomics databases for natural product research: present capabilities and future potential.
Q36036947Paeonia lactiflora Pall. protects against ANIT-induced cholestasis by activating Nrf2 via PI3K/Akt signaling pathway
Q39270273Personalizing Chinese medicine by integrating molecular features of diseases and herb ingredient information: application to acute myeloid leukemia
Q123351378PeruNPDB: the Peruvian Natural Products Database for in silico drug screening
Q28550827PharmDB-K: Integrated Bio-Pharmacological Network Database for Traditional Korean Medicine
Q37556518Pharmacological chaperone design for reducing risk factor of Parkinson's disease from traditional chinese medicine
Q58802435Phenotype-oriented network analysis for discovering pharmacological effects of natural compounds
Q36573094Physician perceptions of HIV cure in China: A mixed methods review and implications for HIV cure research
Q33862690Possible inhibitor from traditional Chinese medicine for the β form of calcium-dependent protein kinase type II in the treatment of major depressive disorder
Q33608964Potential Protein Phosphatase 2A Agents from Traditional Chinese Medicine against Cancer
Q33790946Potential mitochondrial isocitrate dehydrogenase R140Q mutant inhibitor from traditional Chinese medicine against cancers
Q33614602Potential retinoid x receptor agonists for treating Alzheimer's disease from traditional chinese medicine
Q34022289Potential smoothened inhibitor from traditional Chinese medicine against the disease of diabetes, obesity, and cancer
Q47099004Predicting new indications of compounds with a network pharmacology approach: Liuwei Dihuang Wan as a case study
Q92962871Prim-O-glucosylcimifugin enhances the antitumour effect of PD-1 inhibition by targeting myeloid-derived suppressor cells
Q35628345Protective effect of Daming capsule against chronic cerebral ischemia
Q44424717Quantitative and Systems Pharmacology 3. Network-Based Identification of New Targets for Natural Products Enables Potential Uses in Aging-Associated Disorders
Q47731882Quantitative and Systems Pharmacology. 1. In Silico Prediction of Drug-Target Interactions of Natural Products Enables New Targeted Cancer Therapy
Q57814810Quantitative and systems pharmacology 4. Network-based analysis of drug pleiotropy on coronary artery disease
Q58701001Rapid screening and identification of bioactive compounds specifically binding to beta 2-adrenoceptor from San-ao decoction using affinity magnetic fine particles coupled with high-performance liquid chromatography-mass spectrometry
Q41067321Residue-based design of small molecule inhibitor for H1N1, H5N1 and H7N1 mutants
Q34351611Retrieving novel C5aR antagonists using a hybrid ligand-based virtual screening protocol based on SVM classification and pharmacophore models.
Q36855036Revealing the Effects of the Herbal Pair of Euphorbia kansui and Glycyrrhiza on Hepatocellular Carcinoma Ascites with Integrating Network Target Analysis and Experimental Validation
Q38502446Review of natural product databases
Q104840477Review on natural products databases: where to find data in 2020
Q38743935Role of Structural Bioinformatics in Drug Discovery by Computational SNP Analysis: Analyzing Variation at the Protein Level
Q27902290SANCDB: a South African natural compound database
Q90559172STarFish: A Stacked Ensemble Target Fishing Approach and its Application to Natural Products
Q41980724Search for novel remedies to augment radiation resistance of inhabitants of Fukushima and Chernobyl disasters: identifying DNA repair protein XRCC4 inhibitors
Q27144242Shifting from the single to the multitarget paradigm in drug discovery
Q36027635Simultaneous targeting of MyD88 and Nur77 as an effective approach for the treatment of inflammatory diseases
Q47209029SistematX, an Online Web-Based Cheminformatics Tool for Data Management of Secondary Metabolites.
Q33794802Small molecule inhibitors of HCV replication from pomegranate
Q89619963Steamed Panax notoginseng Attenuates Anemia in Mice With Blood Deficiency Syndrome via Regulating Hematopoietic Factors and JAK-STAT Pathway
Q47694026Structural insights into impact of Y134F mutation and discovery of novel fungicidal compounds against CYP51 in Puccinia triticina
Q64286903Structure-Based in Silico Screening Identifies a Potent Ebolavirus Inhibitor from a Traditional Chinese Medicine Library
Q91637842Study on the Antibreast Cancer Mechanism and Bioactive Components of Si-Wu-Tang by Cell Type-Specific Molecular Network
Q30657668Susceptible gene of stasis-stagnation constitution from genome-wide association study related to cardiovascular disturbance and possible regulated traditional Chinese medicine
Q34047858Synergistic antibacterial effects of herbal extracts and antibiotics on methicillin-resistant Staphylococcus aureus: A computational and experimental study
Q34177356System analysis of LWDH related genes based on text mining in biological networks
Q123350995Systematic Description of the Content Variation of Natural Products (NPs): To Prompt the Yield of High-Value NPs and the Discovery of New Therapeutics
Q37105102Systematic investigation of transcription factors critical in the protection against cerebral ischemia by Danhong injection
Q26782866Systems Biology - A Pivotal Research Methodology for Understanding the Mechanisms of Traditional Medicine
Q92132051Systems Pharmacology Approach to Investigate the Mechanism of Kai-Xin-San in Alzheimer's Disease
Q92403114Systems Pharmacology for Investigation of the Mechanisms of Action of Traditional Chinese Medicine in Drug Discovery
Q37708902Systems Pharmacology-Based Discovery of Natural Products for Precision Oncology Through Targeting Cancer Mutated Genes.
Q37972867Systems biology analysis of protein-drug interactions.
Q89251204Systems-Based Interactome Analysis for Hematopoiesis Effect of Angelicae sinensis Radix: Regulated Network of Cell Proliferation towards Hemopoiesis
Q33767328TCM-Mesh: The database and analytical system for network pharmacology analysis for TCM preparations.
Q47154424TCMID 2.0: a comprehensive resource for TCM.
Q36491360TCMID: Traditional Chinese Medicine integrative database for herb molecular mechanism analysis
Q27703005TCMSP: a database of systems pharmacology for drug discovery from herbal medicines
Q33755425TIPdb-3D: the three-dimensional structure database of phytochemicals from Taiwan indigenous plants
Q35686675TM-MC: a database of medicinal materials and chemical compounds in Northeast Asian traditional medicine
Q55270064The Active Components of Fuzheng Huayu Formula and Their Potential Mechanism of Action in Inhibiting the Hepatic Stellate Cells Viability - A Network Pharmacology and Transcriptomics Approach.
Q59794299The Chinese herbal formula Decoction attenuates cognitive impairment and protects cerebrovascular function in SAMP8 mice
Q92620072The Methodological Trends of Traditional Herbal Medicine Employing Network Pharmacology
Q38061445The application of Chinese medicine to novel drug discovery
Q58195302The flexibility of P-glycoprotein for its poly-specific drug binding from molecular dynamics simulations
Q37602204The identification and molecular mechanism of anti-stroke traditional Chinese medicinal compounds
Q33876498The inhibition of folylpolyglutamate synthetase (folC) in the prevention of drug resistance in Mycobacterium tuberculosis by traditional Chinese medicine
Q90291678The perceptions of natural compounds against dipeptidyl peptidase 4 in diabetes: from in silico to in vivo
Q38637348The potential role of in silico approaches to identify novel bioactive molecules from natural resources
Q34316470Three-in-one agonists for PPAR-α, PPAR-γ, and PPAR-δ from traditional Chinese medicine.
Q37588353Thyroid hormone synthesis: a potential target of a Chinese herbal formula Haizao Yuhu Decoction acting on iodine-deficient goiter
Q37291189To Unveil the Molecular Mechanisms of Qi and Blood through Systems Biology-Based Investigation into Si-Jun-Zi-Tang and Si-Wu-Tang formulae
Q38059979Traditional Chinese herbal medicine as a source of molecules with antiviral activity
Q47802856Traditional Chinese medicine application in HIV: an in silico study
Q47197241Traditional Chinese medicine as dual guardians against hypertension and cancer?
Q45961690Traditional Chinese medicine, a solution for reducing dual stroke risk factors at once?
Q26778925Transcriptomics: a sword to cut the Gordian knot of traditional Chinese medicine
Q33746550Treatment of acute lymphoblastic leukemia from traditional chinese medicine
Q33876600Treatment of cardiovascular disease by traditional Chinese medicine against pregnane X receptor
Q33786655Treatment of rheumatoid arthritis with traditional chinese medicine.
Q28478569Two birds with one stone? Possible dual-targeting H1N1 inhibitors from traditional Chinese medicine
Q38917184Ultra high performance liquid chromatography with tandem mass spectrometry for rapid separation and identification of main constituents in Chinese herbal formula Xuan Hu Suo San.
Q35227259Uncovering pharmacological mechanisms of Wu-tou decoction acting on rheumatoid arthritis through systems approaches: drug-target prediction, network analysis and experimental validation
Q49735252Uncovering the anticancer mechanism of Compound Kushen Injection against HCC by integrating quantitative analysis, network analysis and experimental validation.
Q59811770Uncovering the mechanism of Maxing Ganshi Decoction on asthma from a systematic perspective: A network pharmacology study
Q60916613Unveiling Active Constituents and Potential Targets Related to the Hematinic Effect of Steamed Panax notoginseng Using Network Pharmacology Coupled With Multivariate Data Analyses
Q28485387Uroporphyrinogen decarboxylase as a potential target for specific components of traditional Chinese medicine: a virtual screening and molecular dynamics study
Q91615235Utilising network pharmacology to explore the underlying mechanism of Wumei Pill in treating pancreatic neoplasms
Q36393899VSPrep: A General KNIME Workflow for the Preparation of Molecules for Virtual Screening
Q40116572Virtual screening for oseltamivir-resistant a (H5N1) influenza neuraminidase from traditional Chinese medicine database: a combined molecular docking with molecular dynamics approach
Q42235598Virtual screening of potential inhibitors from TCM for the CPSF30 binding site on the NS1A protein of influenza A virus
Q36591830Virtual screening of the inhibitors targeting at the viral protein 40 of Ebola virus
Q42214654Virtual screening of traditional Chinese medicine (TCM) database: identification of fragment-like lead molecules for filariasis target asparaginyl-tRNA synthetase.
Q87712669WITHDRAWN: DrugPrinter: print any drug instantly
Q33631051Wu-Tou Decoction in Rheumatoid Arthritis: Integrating Network Pharmacology and In Vivo Pharmacological Evaluation
Q42700836Xuefu zhuyu decoction improves cognitive impairment in experimental traumatic brain injury via synaptic regulation
Q59812347YaTCM: Yet another Traditional Chinese Medicine Database for Drug Discovery
Q29615857ZINC: a free tool to discover chemistry for biology
Q94553756ZiYinHuaTan Recipe Inhibits Cell Proliferation and Promotes Apoptosis in Gastric Cancer by Suppressing PI3K/AKT Pathway
Q60915719eToxPred: a machine learning-based approach to estimate the toxicity of drug candidates
Q47287940iSMART: an integrated cloud computing web server for traditional Chinese medicine for online virtual screening, de novo evolution and drug design
Q47291934iScreen: world's first cloud-computing web server for virtual screening and de novo drug design based on TCM database@Taiwan
Q28306830istar: a web platform for large-scale protein-ligand docking

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