Rhythmic SAF-A binding underlies circadian transcription of the Bmal1 gene

scientific journal article

Rhythmic SAF-A binding underlies circadian transcription of the Bmal1 gene is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.1128/MCB.02227-07
P932PMC publication ID2423175
P698PubMed publication ID18332112

P2093author name stringNorio Ishida
Yasuhiro Hara
Yoshiaki Onishi
Tomoya Ohno
Syuji Hanai
P2860cites workPrimary structure and binding activity of the hnRNP U protein: binding RNA through RGG boxQ24294777
The orphan nuclear receptor Rev-erbalpha recruits the N-CoR/histone deacetylase 3 corepressor to regulate the circadian Bmal1 geneQ24297850
Histone acetyltransferase-dependent chromatin remodeling and the vascular clockQ24300792
Characterization of SAF-A, a novel nuclear DNA binding protein from HeLa cells with high affinity for nuclear matrix/scaffold attachment DNA elementsQ24337072
The polycomb group protein EZH2 is required for mammalian circadian clock functionQ24337692
Rhythmic serotonin N-acetyltransferase mRNA degradation is essential for the maintenance of its circadian oscillationQ24520629
A noncanonical E-box enhancer drives mouse Period2 circadian oscillations in vivoQ24556686
Biological clocksQ24609274
The language of covalent histone modificationsQ27860931
cDNA cloning and tissue-specific expression of a novel basic helix-loop-helix/PAS protein (BMAL1) and identification of alternatively spliced variants with alternative translation initiation site usageQ27867700
Interaction of NF-E2 in the human beta-globin locus control region before chromatin remodelingQ28201249
Time zones: a comparative genetics of circadian clocksQ28215112
The orphan nuclear receptor REV-ERBalpha controls circadian transcription within the positive limb of the mammalian circadian oscillatorQ28216502
Circadian regulator CLOCK is a histone acetyltransferaseQ28238584
The orphan nuclear receptor RORalpha regulates circadian transcription of the mammalian core-clock Bmal1Q28244388
The glucocorticoid receptor is associated with the RNA-binding nuclear matrix protein hnRNP UQ28253219
Differential control of Bmal1 circadian transcription by REV-ERB and ROR nuclear receptorsQ28280146
Molecular bases for circadian clocksQ28297151
Transcriptional coactivator PGC-1alpha integrates the mammalian clock and energy metabolismQ28508765
Mop3 is an essential component of the master circadian pacemaker in mammalsQ28591939
Circadian and light-induced transcription of clock gene Per1 depends on histone acetylation and deacetylationQ28592162
Interacting molecular loops in the mammalian circadian clockQ29616206
A functional genomics strategy reveals Rora as a component of the mammalian circadian clockQ29616297
MethPrimer: designing primers for methylation PCRsQ29618664
Cloning of the TIS gene suppressed by topoisomerase inhibitors.Q32034976
Endogenous fluctuations of DNA topology in the chloroplast of Chlamydomonas reinhardtiiQ33781727
Chromosomal loop anchorage of the kappa immunoglobulin gene occurs next to the enhancer in a region containing topoisomerase II sitesQ34161702
Hypothalamic integration of central and peripheral clocksQ34297150
Circadian rhythms in gene transcription imparted by chromosome compaction in the cyanobacterium Synechococcus elongatusQ34694533
A novel E4BP4 element drives circadian expression of mPeriod2.Q35646834
Circadian clock, cancer and lipid metabolismQ36736569
Chromosomal landscape of nucleosome-dependent gene expression and silencing in yeast.Q38317749
Expression-dependent perturbation of nucleosomal phases at HS2 of the human beta-LCR: possible correlation with periodic bent DNA.Q38330833
Enhancer activity of HS2 of the human beta-LCR is modulated by distance from the key nucleosomeQ39097055
Uncoupling of promoter methylation and expression of Period1 in cervical cancer cellsQ40115175
hnRNP-U enhances the expression of specific genes by stabilizing mRNA.Q40194719
The association of transcribed genes with the nuclear matrix of Drosophila cells during heat shockQ40568613
Interactivating feedback loops within the mammalian clock: BMAL1 is negatively autoregulated and upregulated by CRY1, CRY2, and PER2.Q42819637
Preparation and characterization of an anti-DNA monoclonal antibody showing size selectivity toward DNA fragments.Q45239632
Circadian expression of hnRNP U, a nuclear multi-potent regulatory protein, in the murine suprachiasmatic nucleusQ48341234
Execution of the circadian negative feedback loop in Neurospora requires the ATP-dependent chromatin-remodeling enzyme CLOCKSWITCH.Q51581445
Translational positioning of nucleosomes on DNA: the role of sequence-dependent isotropic DNA bending stiffness.Q52344458
Alternative chromatin structure at CpG islandsQ57259142
Clusters of CpG dinucleotides implicated by nuclease hypersensitivity as control elements of housekeeping genesQ59057684
Rhythmic histone acetylation underlies transcription in the mammalian circadian clockQ59072611
Nucleosome arrangement on tRNA genes of Xenopus laevisQ72417647
Rhythmic expression of BMAL1 mRNA is altered in Clock mutant mice: differential regulation in the suprachiasmatic nucleus and peripheral tissuesQ73396333
CLOCK leaves its mark on histonesQ79207252
P433issue10
P407language of work or nameEnglishQ1860
P921main subjectcircadian rhythmQ208353
Heterogeneous nuclear ribonucleoprotein UQ21984497
P304page(s)3477–3488
P577publication date2008-05-01
P1433published inMolecular and Cellular BiologyQ3319478
P1476titleRhythmic SAF-A binding underlies circadian transcription of the Bmal1 gene
P478volume28

Reverse relations

cites work (P2860)
Q33707552Epigenetic regulation of the circadian clock: role of 5-aza-2'-deoxycytidine.
Q39707055HSG cells, a model in the submandibular clock.
Q40821150Long noncoding RNA H19 inhibits the proliferation of fetal liver cells and the Wnt signaling pathway.
Q64118593MYOD1 functions as a clock amplifier as well as a critical co-factor for downstream circadian gene expression in muscle
Q28512569Molecular characterization of Mybbp1a as a co-repressor on the Period2 promoter
Q47696890Quantitative phosphoproteomics reveals involvement of multiple signaling pathways in early phagocytosis by the retinal pigmented epithelium.
Q28577107Regulation of DNA Topoisomerase IIbeta through RNA-dependent association with heterogeneous nuclear ribonucleoprotein U (hnRNP U)
Q39412627Regulation of basic helix-loop-helix transcription factors Dec1 and Dec2 by RORα and their roles in adipogenesis
Q24297026Rhythmic binding of Topoisomerase I impacts on the transcription of Bmal1 and circadian period
Q28513649SAF-A forms a complex with BRG1 and both components are required for RNA polymerase II mediated transcription
Q39607896SAF-A has a role in transcriptional regulation of Oct4 in ES cells through promoter binding
Q24632245The Trithorax group protein Ash2l and Saf-A are recruited to the inactive X chromosome at the onset of stable X inactivation
Q39576555The harmala alkaloid harmine is a modulator of circadian Bmal1 transcription.
Q28504588Transcription factor NF-Y is a functional regulator of the transcription of core clock gene Bmal1
Q91105551β-Arrestin 1 (ARRB1) serves as a molecular marker of the peripheral circadian rhythm

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