scholarly article | Q13442814 |
P819 | ADS bibcode | 2015PLoSO..1021092B |
P356 | DOI | 10.1371/JOURNAL.PONE.0121092 |
P932 | PMC publication ID | 4395452 |
P698 | PubMed publication ID | 25874456 |
P5875 | ResearchGate publication ID | 275238469 |
P50 | author | Jean-Luc Fattebert | Q39067182 |
Aiyana Emigh | Q59696868 | ||
P2093 | author name string | Brian J Bennion | |
Edmond Y Lau | |||
Felice C Lightstone | |||
Sebnem G Essiz | |||
P2860 | cites work | Structure of HI-6*sarin-acetylcholinesterase determined by X-ray crystallography and molecular dynamics simulation: reactivator mechanism and design | Q21090062 |
The global distribution of fatal pesticide self-poisoning: systematic review | Q21257222 | ||
Fractional diffusion-limited component of reactions catalyzed by acetylcholinesterase | Q24300215 | ||
The Protein Data Bank | Q24515306 | ||
The 'aromatic patch' of three proximal residues in the human acetylcholinesterase active centre allows for versatile interaction modes with inhibitors | Q24531206 | ||
CHARMM: the biomolecular simulation program | Q24658108 | ||
Cooperative binding of DNA and CBFbeta to the Runt domain of the CBFalpha studied via MD simulations. | Q24814788 | ||
Generalized Gradient Approximation Made Simple | Q25938998 | ||
Evolutionarily conserved linkage between enzyme fold, flexibility, and catalysis | Q27320714 | ||
"Back door" opening implied by the crystal structure of a carbamoylated acetylcholinesterase | Q27618113 | ||
Crystal structures of aged phosphonylated acetylcholinesterase: nerve agent reaction products at the atomic level | Q27618409 | ||
Structures of recombinant native and E202Q mutant human acetylcholinesterase complexed with the snake-venom toxin fasciculin-II | Q27627732 | ||
X-ray structures of Torpedo californica acetylcholinesterase complexed with (+)-huperzine A and (-)-huperzine B: structural evidence for an active site rearrangement | Q27639524 | ||
Use of a 'caged' analogue to study the traffic of choline within acetylcholinesterase by kinetic crystallography | Q27649071 | ||
Aging of cholinesterases phosphylated by tabun proceeds through O-dealkylation | Q27652714 | ||
Crystallographic snapshots of nonaged and aged conjugates of soman with acetylcholinesterase, and of a ternary complex of the aged conjugate with pralidoxime | Q27656774 | ||
Crystal structures of oxime-bound fenamiphos-acetylcholinesterases: reactivation involving flipping of the His447 ring to form a reactive Glu334-His447-oxime triad | Q27657336 | ||
Backdoor opening mechanism in acetylcholinesterase based on X-ray crystallography and molecular dynamics simulations | Q27667894 | ||
Catalytic-site conformational equilibrium in nerve-agent adducts of acetylcholinesterase: possible implications for the HI-6 antidote substrate specificity | Q27683880 | ||
VMD: visual molecular dynamics | Q27860554 | ||
Scalable molecular dynamics with NAMD | Q27860718 | ||
The molecular mechanism of stabilization of proteins by TMAO and its ability to counteract the effects of urea | Q28200812 | ||
Normal mode analysis of macromolecular motions in a database framework: developing mode concentration as a useful classifying statistic | Q28220822 | ||
Atomic Structure of Acetylcholinesterase from Torpedo californica : A Prototypic Acetylcholine-Binding Protein | Q28247386 | ||
Knowledge-based protein secondary structure assignment | Q29547838 | ||
Preventing misfolding of the prion protein by trimethylamine N-oxide | Q30969085 | ||
Gated Diffusion-controlled Reactions | Q31011573 | ||
Counteraction of urea-induced protein denaturation by trimethylamine N-oxide: a chemical chaperone at atomic resolution | Q33694783 | ||
Analysis of a 10-ns molecular dynamics simulation of mouse acetylcholinesterase | Q34176038 | ||
The dynamics of ligand barrier crossing inside the acetylcholinesterase gorge | Q34183070 | ||
Fasciculins, anticholinesterase toxins from the venom of the green mamba Dendroaspis angusticeps. | Q34262942 | ||
Long route or shortcut? A molecular dynamics study of traffic of thiocholine within the active-site gorge of acetylcholinesterase | Q34398608 | ||
Conformation gating as a mechanism for enzyme specificity | Q36255724 | ||
Free energy landscape for the binding process of Huperzine A to acetylcholinesterase | Q36692853 | ||
Flexibility of aromatic residues in the active-site gorge of acetylcholinesterase: X-ray versus molecular dynamics | Q36838929 | ||
Gates of enzymes | Q37098498 | ||
Evolution of and perspectives on therapeutic approaches to nerve agent poisoning. | Q37869601 | ||
A review on cholinesterase inhibitors for Alzheimer's disease | Q38084168 | ||
The value of novel oximes for treatment of poisoning by organophosphorus compounds | Q38100562 | ||
Pathways of ligand clearance in acetylcholinesterase by multiple copy sampling. | Q38578077 | ||
Y124 at the peripheral anionic site is important for the reactivation of nerve agent-inhibited acetylcholinesterase by H oximes | Q39676409 | ||
Nanosecond dynamics of acetylcholinesterase near the active center gorge | Q40567954 | ||
Electrostatic attraction by surface charge does not contribute to the catalytic efficiency of acetylcholinesterase | Q40792669 | ||
Aging of phosphylated human acetylcholinesterase: catalytic processes mediated by aromatic and polar residues of the active centre | Q41167486 | ||
Allosteric Control of Acetylcholinesterase Catalysis by Fasciculin | Q41302137 | ||
Structural insights into substrate traffic and inhibition in acetylcholinesterase | Q41444745 | ||
Reaction pathway and free-energy barrier for reactivation of dimethylphosphoryl-inhibited human acetylcholinesterase | Q41833021 | ||
Aging mechanism of soman inhibited acetylcholinesterase | Q41842685 | ||
Electrooptical measurements demonstrate a large permanent dipole moment associated with acetylcholinesterase | Q41861380 | ||
How is acetylcholinesterase phosphonylated by soman? An ab initio QM/MM molecular dynamics study | Q42050042 | ||
Reaction profiles of the interaction between sarin and acetylcholinesterase and the S203C mutant: model nucleophiles and QM/MM potential energy surfaces | Q42149918 | ||
Conformational change of proteins arising from normal mode calculations | Q42646780 | ||
Active site gating and substrate specificity of butyrylcholinesterase and acetylcholinesterase: insights from molecular dynamics simulations | Q42800836 | ||
Induced-fit or preexisting equilibrium dynamics? Lessons from protein crystallography and MD simulations on acetylcholinesterase and implications for structure-based drug design | Q43081937 | ||
Quantitative Assessment of Electrostatic Embedding in Density Functional Theory Calculations of Biomolecular Systems | Q44403331 | ||
Improved treatment of the protein backbone in empirical force fields. | Q44735024 | ||
Syrian gas attack reinforces need for better anti-sarin drugs | Q44771834 | ||
Kinetic analysis of interactions between human acetylcholinesterase, structurally different organophosphorus compounds and oximes | Q45118910 | ||
The complex of a bivalent derivative of galanthamine with torpedo acetylcholinesterase displays drastic deformation of the active-site gorge: implications for structure-based drug design | Q45162250 | ||
Role of the peripheral anionic site on acetylcholinesterase: inhibition by substrates and coumarin derivatives | Q46724847 | ||
Molecular docking study on the "back door" hypothesis for product clearance in acetylcholinesterase | Q46845644 | ||
Dynamic mechanism of E2020 binding to acetylcholinesterase: a steered molecular dynamics simulation | Q46866080 | ||
Binding of 125I-fasciculin to rat brain acetylcholinesterase. The complex still binds diisopropyl fluorophosphate | Q48266569 | ||
Small molecular products of dealkylation in soman-inhibited electric eel acetylcholinesterase. | Q51448661 | ||
Acetylcholinesterase: electrostatic steering increases the rate of ligand binding. | Q52402262 | ||
How does huperzine A enter and leave the binding gorge of acetylcholinesterase? Steered molecular dynamics simulations. | Q53612283 | ||
Site-directed mutants designed to test back-door hypotheses of acetylcholinesterase function. | Q53987467 | ||
Open "back door" in a molecular dynamics simulation of acetylcholinesterase. | Q54032280 | ||
Reaction Products of Acetylcholinesterase and VX Reveal a Mobile Histidine in the Catalytic Triad | Q55897872 | ||
Semianalytical treatment of solvation for molecular mechanics and dynamics | Q56866446 | ||
Benchmark Database of Barrier Heights for Heavy Atom Transfer, Nucleophilic Substitution, Association, and Unimolecular Reactions and Its Use to Test Theoretical Methods | Q57402199 | ||
Fasciculin 2 Binds to the Peripheral Site on Acetylcholinesterase and Inhibits Substrate Hydrolysis by Slowing a Step Involving Proton Transfer during Enzyme Acylation | Q71996658 | ||
Ageing and dealkylation of soman (pinacolylmethylphosphonofluoridate)-inactivated eel cholinesterase | Q72335377 | ||
The "back door" hypothesis for product clearance in acetylcholinesterase challenged by site-directed mutagenesis | Q72808598 | ||
Peripheral binding site is involved in the neurotrophic activity of acetylcholinesterase | Q73320982 | ||
Electrostatic steering of substrate to acetylcholinesterase: analysis of field fluctuations | Q73459271 | ||
Amino acid residues involved in the interaction of acetylcholinesterase and butyrylcholinesterase with the carbamates Ro 02-0683 and bambuterol, and with terbutaline | Q78122907 | ||
Turnover number of acetyl-cholinesterase | Q79108358 | ||
Substrate and product trafficking through the active center gorge of acetylcholinesterase analyzed by crystallography and equilibrium binding | Q79892396 | ||
Crystal structures of acetylcholinesterase in complex with HI-6, Ortho-7 and obidoxime: structural basis for differences in the ability to reactivate tabun conjugates | Q80022445 | ||
Energy landscapes of human acetylcholinesterase and its Huperzine A-inhibited counterpart | Q85550984 | ||
Motional heterogeneity in human acetylcholinesterase revealed by a non-Gaussian model for elastic incoherent neutron scattering | Q86629720 | ||
P275 | copyright license | Creative Commons Attribution 4.0 International | Q20007257 |
P6216 | copyright status | copyrighted | Q50423863 |
P4510 | describes a project that uses | molecular dynamics simulation | Q901663 |
P433 | issue | 4 | |
P407 | language of work or name | English | Q1860 |
P921 | main subject | soman | Q408044 |
molecular dynamics simulation | Q901663 | ||
P304 | page(s) | e0121092 | |
P577 | publication date | 2015-01-01 | |
P1433 | published in | PLOS One | Q564954 |
P1476 | title | A wrench in the works of human acetylcholinesterase: soman induced conformational changes revealed by molecular dynamics simulations | |
P478 | volume | 10 |