| scholarly article | Q13442814 |
| P50 | author | Ian A Johnston | Q56427767 |
| P2093 | author name string | Daniel J Macqueen | |
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| Did genome duplication drive the origin of teleosts? A comparative study of diversification in ray-finned fishes | Q28751601 | ||
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| Polyploidy and angiosperm diversification | Q29617868 | ||
| The Phanerozoic record of global sea-level change | Q29617889 | ||
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| Recently formed polyploid plants diversify at lower rates | Q33996502 | ||
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| Homing in Pacific salmon: mechanisms and ecological basis | Q34441147 | ||
| Multiple rounds of speciation associated with reciprocal gene loss in polyploid yeasts | Q34502616 | ||
| Evolution of ancient functions in the vertebrate insulin-like growth factor system uncovered by study of duplicated salmonid fish genomes | Q34567014 | ||
| Ancestors 1.0: a web server for ancestral sequence reconstruction | Q35009146 | ||
| Evolution of adaptive diversity and genetic connectivity in Arctic charr (Salvelinus alpinus) in Iceland. | Q35092769 | ||
| Aquatic productivity and the evolution of diadromous fish migration | Q39034186 | ||
| Pike and salmon as sister taxa: detailed intraclade resolution and divergence time estimation of Esociformes + Salmoniformes based on whole mitochondrial genome sequences. | Q44296269 | ||
| Grayling (Thymallinae) phylogeny within salmonids: complete mitochondrial DNA sequences of Thymallus arcticus and Thymallus thymallus | Q45656090 | ||
| Genome duplication and multiple evolutionary origins of complex migratory behavior in Salmonidae | Q46217981 | ||
| Reciprocal gene loss following experimental whole-genome duplication causes reproductive isolation in yeast | Q46493001 | ||
| Thresholds for Cenozoic bipolar glaciation | Q47278499 | ||
| The ghost of selection past: rates of evolution and functional divergence of anciently duplicated genes. | Q52128230 | ||
| Universal scaling rules predict evolutionary patterns of myogenesis in species with indeterminate growth. | Q55155492 | ||
| P433 | issue | 1778 | |
| P407 | language of work or name | English | Q1860 |
| P921 | main subject | whole genome sequencing | Q2068526 |
| whole genome duplication | Q63285481 | ||
| P304 | page(s) | 20132881 | |
| P577 | publication date | 2014-03-07 | |
| P1433 | published in | Proceedings of the Royal Society B | Q2625424 |
| P1476 | title | A well-constrained estimate for the timing of the salmonid whole genome duplication reveals major decoupling from species diversification | |
| P478 | volume | 281 |
| Q37746534 | A Dense Brown Trout (Salmo trutta) Linkage Map Reveals Recent Chromosomal Rearrangements in the Salmo Genus and the Impact of Selection on Linked Neutral Diversity |
| Q57294361 | A European Whitefish Linkage Map and Its Implications for Understanding Genome-Wide Synteny Between Salmonids Following Whole Genome Duplication |
| Q54958768 | A New Single Nucleotide Polymorphism Database for Rainbow Trout Generated Through Whole Genome Resequencing. |
| Q37629323 | A SNP Based Linkage Map of the Arctic Charr (Salvelinus alpinus) Genome Provides Insights into the Diploidization Process After Whole Genome Duplication |
| Q35190832 | A comprehensive analysis of teleost MHC class I sequences |
| Q90668539 | A systemic study of lipid metabolism regulation in salmon fingerlings and early juveniles fed plant oil |
| Q40405309 | An integrated linkage map reveals candidate genes underlying adaptive variation in Chinook salmon (Oncorhynchus tshawytscha). |
| Q102053972 | Artificial whole genome duplication in paleopolyploid sturgeons yields highest documented chromosome number in vertebrates |
| Q90733050 | At Least Two Genes Encode Many Variants of Irak3 in Rainbow Trout, but Neither the Full-Length Factor Nor Its Variants Interfere Directly With the TLR-Mediated Stimulation of Inflammation |
| Q64968956 | Atlantic salmon (Salmo salar L.) genetics in the 21st century: taking leaps forward in aquaculture and biological understanding. |
| Q35193629 | Atlantic salmon show capability for cardiac acclimation to warm temperatures |
| Q36010885 | Auto-Adhesion Potential of Extraocular Aqp0 during Teleost Development |
| Q36291610 | Autopolyploidy genome duplication preserves other ancient genome duplications in Atlantic salmon (Salmo salar) |
| Q35213241 | Characterization of the transcriptome of fast and slow muscle myotomal fibres in the pacu (Piaractus mesopotamicus) |
| Q52604575 | Chinook salmon (Oncorhynchus tshawytscha) genome and transcriptome. |
| Q35800478 | Chromosomal characteristics and distribution of rDNA sequences in the brook trout Salvelinus fontinalis (Mitchill, 1814). |
| Q58392054 | Chromosomes of Asian cyprinid fishes: cytogenetic analysis of two representatives of small paleotetraploid tribe Probarbini |
| Q37675433 | Comparative Physiology of Energy Metabolism: Fishing for Endocrine Signals in the Early Vertebrate Pool |
| Q34213456 | Comparative mapping between Coho Salmon (Oncorhynchus kisutch) and three other salmonids suggests a role for chromosomal rearrangements in the retention of duplicated regions following a whole genome duplication event. |
| Q48061812 | Complex Genes Are Preferentially Retained After Whole-Genome Duplication in Teleost Fish. |
| Q57128858 | Comprehensive phylogeny of ray-finned fishes (Actinopterygii) based on transcriptomic and genomic data |
| Q46375228 | Congruent population structure across paralogous and nonparalogous loci in Salish Sea chum salmon (Oncorhynchus keta). |
| Q53733940 | Constraining the timing of whole genome duplication in plant evolutionary history. |
| Q58733160 | DNA methylation of the promoter region of bnip3 and bnip3l genes induced by metabolic programming |
| Q64889330 | De novo European eel transcriptome provides insights into the evolutionary history of duplicated genes in teleost lineages. |
| Q48155279 | De novo assembly and characterization of the Hucho taimen transcriptome. |
| Q47223854 | De novo transcriptome assembly, annotation and comparison of four ecological and evolutionary model salmonid fish species |
| Q50004442 | Differential gene expression during early development in recently evolved and sympatric Arctic charr morphs |
| Q36256557 | Divergent regulation of insulin-like growth factor binding protein genes in cultured Atlantic salmon myotubes under different models of catabolism and anabolism. |
| Q38946875 | Diversification of Hox Gene Clusters in Osteoglossomorph Fish in Comparison to Other Teleosts and the Spotted Gar Outgroup |
| Q46287954 | Do genetic drift and accumulation of deleterious mutations preclude adaptation? Empirical investigation using RADseq in a northern lacustrine fish |
| Q40107411 | Don't throw the baby out with the bathwater: identifying and mapping paralogs in salmonids |
| Q28821830 | Dual NRF2 paralogs in Coho salmon and their antioxidant response element targets |
| Q51144215 | Dynamics of tandemly repeated DNA sequences during evolution of diploid and tetraploid botiid loaches (Teleostei: Cobitoidea: Botiidae). |
| Q37738547 | Evolution and Expression of Tissue Globins in Ray-Finned Fishes. |
| Q37302849 | Evolution history of duplicated smad3 genes in teleost: insights from Japanese flounder, Paralichthys olivaceus |
| Q50027109 | Evolution of neuropeptide signalling systems |
| Q100569033 | Evolution of sex hormone binding globulins reveals early gene duplication at the root of vertebrates |
| Q39227787 | Evolution of the duplicated intracellular lipid-binding protein genes of teleost fishes |
| Q47187262 | Evolution of the glucagon-like system across fish |
| Q35130817 | Evolutionary history and epigenetic regulation of the three paralogous pax7 genes in rainbow trout |
| Q28647359 | Exploring the utility of cross-laboratory RAD-sequencing datasets for phylogenetic analysis |
| Q90887382 | Extensive genetic differentiation between recently evolved sympatric Arctic charr morphs |
| Q34007265 | Extensive local gene duplication and functional divergence among paralogs in Atlantic salmon |
| Q36998130 | First in-depth analysis of the novel Th2-type cytokines in salmonid fish reveals distinct patterns of expression and modulation but overlapping bioactivities |
| Q42333947 | Functional Annotation of All Salmonid Genomes (FAASG): an international initiative supporting future salmonid research, conservation and aquaculture |
| Q36020537 | Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database |
| Q64905824 | Genome-wide estimates of genetic diversity, inbreeding and effective size of experimental and commercial rainbow trout lines undergoing selective breeding. |
| Q90561560 | Genomic variation underlying complex life-history traits revealed by genome sequencing in Chinook salmon |
| Q57052751 | High-throughput proteomic profiling of the fish liver following bacterial infection |
| Q37235922 | Identification of Two Subgroups of Type I IFNs in Perciforme Fish Large Yellow Croaker Larimichthys crocea Provides Novel Insights into Function and Regulation of Fish Type I IFNs |
| Q41257743 | Identification of the salmonid IL-17A/F1a/b, IL-17A/F2b, IL-17A/F3 and IL-17N genes and analysis of their expression following in vitro stimulation and infection |
| Q90352498 | Impact of supplementation on deleterious mutation distribution in an exploited salmonid |
| Q87869534 | Inferring phylogenetic structure, hybridization and divergence times within Salmoninae (Teleostei: Salmonidae) using RAD-sequencing |
| Q90303896 | Insights into the Evolution of the Suppressors of Cytokine Signaling (SOCS) Gene Family in Vertebrates |
| Q55336043 | Insulin-Like Growth Factor-Binding Proteins of Teleost Fishes. |
| Q50284227 | Integration of Random Forest with population-based outlier analyses provides insight on the genomic basis and evolution of run timing in Chinook salmon (Oncorhynchus tshawytscha). |
| Q33796026 | Lineage-specific rediploidization is a mechanism to explain time-lags between genome duplication and evolutionary diversification |
| Q28597314 | Little evidence for enhanced phenotypic evolution in early teleosts relative to their living fossil sister group |
| Q90212396 | Long-Term Conservation of Ohnologs Through Partial Tetrasomy Following Whole-Genome Duplication in Salmonidae |
| Q26770048 | MHC and Evolution in Teleosts |
| Q64115037 | Molecular Evolution of Tryptophan Hydroxylases in Vertebrates: A Comparative Genomic Survey |
| Q36295748 | Molecular cytogenetic differentiation of paralogs of Hox paralogs in duplicated and re-diploidized genome of the North American paddlefish (Polyodon spathula). |
| Q37624763 | NFAT5 genes are part of the osmotic regulatory system in Atlantic salmon (Salmo salar). |
| Q64251903 | Netting the Stress Responses in Fish |
| Q58721664 | New Perspectives on the Evolutionary History of Vitellogenin Gene Family in Vertebrates |
| Q39043813 | New genes from old: asymmetric divergence of gene duplicates and the evolution of development |
| Q46739281 | New insights into the nutritional regulation of gluconeogenesis in carnivorous rainbow trout (Oncorhynchus mykiss): a gene duplication trail |
| Q33585188 | No evidence for the radiation time lag model after whole genome duplications in Teleostei |
| Q92133817 | Nucleotide composition of transposable elements likely contributes to AT/GC compositional homogeneity of teleost fish genomes |
| Q35749041 | Oncorhynchus mykiss pax7 sequence variations with comparative analyses against other teleost species |
| Q90726566 | PMERGE: Computational filtering of paralogous sequences from RAD-seq data |
| Q92212128 | Parallel selection on ecologically relevant gene functions in the transcriptomes of highly diversifying salmonids |
| Q31137982 | Paralogs are revealed by proportion of heterozygotes and deviations in read ratios in genotyping-by-sequencing data from natural populations |
| Q92645733 | Phylogenetic Reclassification of Vertebrate Melatonin Receptors To Include Mel1d |
| Q30661562 | Phylogenomic and functional analyses of salmon lice aquaporins uncover the molecular diversity of the superfamily in Arthropoda. |
| Q46676140 | Phylogeny and dating of divergences within the genus Thymallus (Salmonidae: Thymallinae) using complete mitochondrial genomes |
| Q51734487 | Phylogeography and taxonomic status of trout and salmon from the Ponto-Caspian drainages, with inferences on European Brown Trout evolution and taxonomy. |
| Q98163375 | Polyploidization and pseudogenization in allotetraploid frog Xenopus laevis promote the evolution of aquaporin family in higher vertebrates |
| Q58771658 | Population genetic analysis of aquaculture salmonid populations in China using a 57K rainbow trout SNP array |
| Q35728231 | RNAseq analysis of fast skeletal muscle in restriction-fed transgenic coho salmon (Oncorhynchus kisutch): an experimental model uncoupling the growth hormone and nutritional signals regulating growth |
| Q41528421 | Recent advances in understanding the roles of whole genome duplications in evolution. |
| Q41694535 | Revisiting the mitogenomic phylogeny of Salmoninae: new insights thanks to recent sequencing advances. |
| Q90475717 | Salmo salar glucocorticoid receptors analyses of alternative splicing variants under stress conditions |
| Q38708470 | SalmoBase: an integrated molecular data resource for Salmonid species. |
| Q36273104 | Salmonid Chromosome Evolution as Revealed by a Novel Method for Comparing RADseq Linkage Maps |
| Q38732742 | Screening of duplicated loci reveals hidden divergence patterns in a complex salmonid genome |
| Q64241127 | Sex-Specific Co-expression Networks and Sex-Biased Gene Expression in the Salmonid Brook Charr |
| Q46328161 | Significant Synteny and Colocalization of Ecologically Relevant Quantitative Trait Loci Within and Across Species of Salmonid Fishes. |
| Q38545869 | Small functional If current in sinoatrial pacemaker cells of the brown trout (Salmo trutta fario) heart despite strong expression of HCN channel transcripts. |
| Q38759244 | Sorting duplicated loci disentangles complexities of polyploid genomes masked by genotyping by sequencing. |
| Q54623229 | Speciation and genetic divergence of three species of charr from ancient Lake El'gygytgyn (Chukotka) and their phylogenetic relationships with other representatives of the genusSalvelinus |
| Q38436395 | Standing chromosomal variation in Lake Whitefish species pairs: the role of historical contingency and relevance for speciation |
| Q42550899 | Systematic variation in the pattern of gene paralog retention between the teleost superorders Ostariophysi and Acanthopterygii |
| Q28657578 | Tangled up in two: a burst of genome duplications at the end of the Cretaceous and the consequences for plant evolution |
| Q55034712 | Teleost Fish-Specific Preferential Retention of Pigmentation Gene-Containing Families After Whole Genome Duplications in Vertebrates. |
| Q36363115 | Tgm1-like transglutaminases in tilapia (Oreochromis mossambicus) |
| Q91722577 | The AMPK system of salmonid fishes was expanded through genome duplication and is regulated by growth and immune status in muscle |
| Q58744003 | The Arctic charr (Salvelinus alpinus) genome and transcriptome assembly |
| Q35992393 | The Atlantic salmon genome provides insights into rediploidization |
| Q64067908 | The Chromosome-Level Genome Assembly of European Grayling Reveals Aspects of a Unique Genome Evolution Process Within Salmonids |
| Q40308985 | The Evolutionary Aspects of Aquaporin Family |
| Q57817108 | The Grayling Genome Reveals Selection on Gene Expression Regulation after Whole-Genome Duplication |
| Q90662937 | The allotetraploid origin and asymmetrical genome evolution of the common carp Cyprinus carpio |
| Q37343062 | The complete salmonid IGF-IR gene repertoire and its transcriptional response to disease |
| Q37224075 | The developmental transcriptome of contrasting Arctic charr ( Salvelinus alpinus) morphs. |
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| Q35622108 | The genetic architecture of growth and fillet traits in farmed Atlantic salmon (Salmo salar). |
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