Topology and dynamics of the 10 kDa C-terminal domain of DnaK in solution

scientific article (publication date: February 1999)

Topology and dynamics of the 10 kDa C-terminal domain of DnaK in solution is …
instance of (P31):
scholarly articleQ13442814

External links are
P356DOI10.1110/PS.8.2.343
P932PMC publication ID2144266
P698PubMed publication ID10048327
P5875ResearchGate publication ID13242630

P2093author name stringH Zhou
F W Dahlquist
D F Lowry
G C Flynn
E B Bertelsen
P2860cites workEukaryotic homologues of Escherichia coli dnaJ: a diverse protein family that functions with hsp70 stress proteinsQ24622449
Three-dimensional structure of the ATPase fragment of a 70K heat-shock cognate proteinQ27667092
Structural analysis of substrate binding by the molecular chaperone DnaKQ27732810
NMR structure of the J-domain and the Gly/Phe-rich region of the Escherichia coli DnaJ chaperoneQ27733313
Interplay of structure and disorder in cochaperonin mobile loopsQ27733719
Crystal structure of the nucleotide exchange factor GrpE bound to the ATPase domain of the molecular chaperone DnaKQ27735852
Defining long range order in NMR structure determination from the dependence of heteronuclear relaxation times on rotational diffusion anisotropyQ27739077
NMR solution structure of the 21 kDa chaperone protein DnaK substrate binding domain: a preview of chaperone-protein interactionQ27758070
Backbone dynamics of a free and phosphopeptide-complexed Src homology 2 domain studied by 15N NMR relaxationQ27860508
Molecular evolution of the HSP70 multigene familyQ27940113
A mitochondrial homolog of bacterial GrpE interacts with mitochondrial hsp70 and is essential for viabilityQ27972960
Direct measurement of distances and angles in biomolecules by NMR in a dilute liquid crystalline mediumQ28253146
Heteronuclear three-dimensional NMR spectroscopy of the inflammatory protein C5aQ28276423
Hip, a novel cochaperone involved in the eukaryotic hsc70/hsp40 reaction cycleQ28569622
Backbone dynamics of proteins as studied by 15N inverse detected heteronuclear NMR spectroscopy: application to staphylococcal nucleaseQ29547582
Protein folding in the cellQ29547792
Primary structure effects on peptide group hydrogen exchangeQ29614750
Escherichia coli DnaJ and GrpE heat shock proteins jointly stimulate ATPase activity of DnaKQ29618850
Characterization of the backbone dynamics of folded and denatured states of an SH3 domainQ30176612
Comparison of the backbone dynamics of a folded and an unfolded SH3 domain existing in equilibrium in aqueous buffer.Q30193714
The peptide-binding domain of the chaperone protein Hsc70 has an unusual secondary structure topologyQ30418425
Mutations altering heat shock specific subunit of RNA polymerase suppress major cellular defects of E. coli mutants lacking the DnaK chaperoneQ33923343
Analysis of the backbone dynamics of interleukin-1 beta using two-dimensional inverse detected heteronuclear 15N-1H NMR spectroscopyQ34246390
The role of molecular chaperones in protein foldingQ34368042
New methods of structure refinement for macromolecular structure determination by NMR.Q34469265
NMR structure determination of the Escherichia coli DnaJ molecular chaperone: secondary structure and backbone fold of the N-terminal region (residues 2-108) containing the highly conserved J domain.Q35909875
Cooperation of GroEL/GroES and DnaK/DnaJ heat shock proteins in preventing protein misfolding in Escherichia coliQ37276384
The conserved G/F motif of the DnaJ chaperone is necessary for the activation of the substrate binding properties of the DnaK chaperoneQ38298937
Identification of the peptide binding domain of hsc70. 18-Kilodalton fragment located immediately after ATPase domain is sufficient for high affinity bindingQ38313453
A bipartite signaling mechanism involved in DnaJ-mediated activation of the Escherichia coli DnaK proteinQ38357902
Chemical shifts as a tool for structure determinationQ40576242
Mitochondrial molecular chaperones: their role in protein translocationQ40741572
Identification of a regulatory motif in Hsp70 that affects ATPase activity, substrate binding and interaction with HDJ-1.Q40806764
Interaction of heavy chain binding protein (BiP/GRP78) with adenine nucleotidesQ40817891
Close encounters: why unstructured, polymeric domains can increase rates of specific macromolecular associationQ40823855
Eukaryotic DnaJ homologs and the specificity of Hsp70 activityQ40826960
Interaction of Hsp70 chaperones with substratesQ41465900
Expression and nitrogen-15 labeling of proteins for proton and nitrogen-15 nuclear magnetic resonanceQ44456602
ATPase kinetics of recombinant bovine 70 kDa heat shock cognate protein and its amino-terminal ATPase domainQ46067955
DnaK ATPase activity revisitedQ46718808
Long-range motional restrictions in a multidomain zinc-finger protein from anisotropic tumbling.Q52341521
Precise vicinal coupling constants 3JHN alpha in proteins from nonlinear fits of J-modulated [15N,1H]-COSY experiments.Q52422094
Backbone dynamics of calmodulin studied by 15N relaxation using inverse detected two-dimensional NMR spectroscopy: the central helix is flexible.Q52443969
Divergent effects of ATP on the binding of the DnaK and DnaJ chaperones to each other, or to their various native and denatured protein substrates.Q54606140
The DnaK chaperone system of Escherichia coli: quaternary structures and interactions of the DnaK and GrpE components.Q54617449
Uncoupling of peptide-stimulated ATPase and clathrin-uncoating activity in deletion mutant of hsc70.Q54639781
Characterization of a functionally important mobile domain of GroES.Q54654548
Reconstitution of a nine-protein system that initiates bacteriophage lambda DNA replication.Q54733874
Identification of 1H resonances from the bait region of human alpha 2-macroglobulin and effects of proteases and methylamineQ68975988
The ATPase core of a clathrin uncoating proteinQ70161623
Nucleotide-induced conformational changes in the ATPase and substrate binding domains of the DnaK chaperone provide evidence for interdomain communicationQ71921283
Large modular proteins by NMRQ71958801
The role of ATP in the functional cycle of the DnaK chaperone systemQ72300885
Kinetic characterization of the ATPase cycle of the DnaK molecular chaperoneQ74024061
P433issue2
P407language of work or nameEnglishQ1860
P921main subjectmolecular massQ182854
P304page(s)343-54
P577publication date1999-02-01
P1433published inProtein ScienceQ7251445
P1476titleTopology and dynamics of the 10 kDa C-terminal domain of DnaK in solution
P478volume8

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cites work (P2860)
Q35152082A bipartite interaction between Hsp70 and CHIP regulates ubiquitination of chaperoned client proteins
Q52656766A cluster of diagnostic Hsp68 amino acid sites that are identified in Drosophila from the melanogaster species group are concentrated around beta-sheet residues involved with substrate binding.
Q27653249Allosteric Coupling between the Lid and Interdomain Linker in DnaK Revealed by Inhibitor Binding Studies
Q28266387Allostery in the Hsp70 chaperone proteins
Q41959252An interdomain energetic tug-of-war creates the allosterically active state in Hsp70 molecular chaperones
Q27936582Ecm10, a novel hsp70 homolog in the mitochondrial matrix of the yeast Saccharomyces cerevisiae
Q47372406Fine tuning of a biological machine: DnaK gains improved chaperone activity by altered allosteric communication and substrate binding
Q37810586Flexible Nets of Malleable Guardians: Intrinsically Disordered Chaperones in Neurodegenerative Diseases
Q30354473HSPA8/HSC70 chaperone protein: structure, function, and chemical targeting.
Q40392313Heat-shock cognate 70 is required for the activation of heat-shock factor 1 in mammalian cells
Q34545594Hsp70 chaperone machines.
Q24681842Interaction of murine BiP/GRP78 with the DnaJ homologue MTJ1
Q93222384Recent advances in the structural and mechanistic aspects of Hsp70 molecular chaperones
Q27655465Solution conformation of wild-type E. coli Hsp70 (DnaK) chaperone complexed with ADP and substrate
Q28118960The C-terminal helices of heat shock protein 70 are essential for J-domain binding and ATPase activation
Q34386414The substrate binding domain of DnaK facilitates slow protein refolding
Q41843035Tracking the interplay between bound peptide and the lid domain of DnaK, using molecular dynamics

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