FastRNABindR: Fast and Accurate Prediction of Protein-RNA Interface Residues

scientific article (publication date: 6 July 2016)

FastRNABindR: Fast and Accurate Prediction of Protein-RNA Interface Residues is …
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scholarly articleQ13442814

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P819ADS bibcode2016PLoSO..1158445E
P356DOI10.1371/JOURNAL.PONE.0158445
P3181OpenCitations bibliographic resource ID237284
P932PMC publication ID4934694
P698PubMed publication ID27383535

P50authorVasant HonavarQ7916327
P2093author name stringYasser EL-Manzalawy
Mostafa Abbas
Qutaibah Malluhi
P2860cites workDiverse RNA-binding proteins interact with functionally related sets of RNAs, suggesting an extensive regulatory systemQ21092736
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Protein-RNA interface residue prediction using machine learning: an assessment of the state of the artQ29026419
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Amino acid residue doublet propensity in the protein-RNA interface and its application to RNA interface predictionQ41919041
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Prediction of nucleic acid binding probability in proteins: a neighboring residue network based scoreQ42410843
Optimal protein-RNA area, OPRA: a propensity-based method to identify RNA-binding sites on proteinsQ43284323
Natural similarity measures between position frequency matrices with an application to clusteringQ48367238
P275copyright licenseCreative Commons Attribution 4.0 InternationalQ20007257
P6216copyright statuscopyrightedQ50423863
P433issue7
P407language of work or nameEnglishQ1860
P304page(s)e0158445
P577publication date2016-07-06
P1433published inPLOS OneQ564954
P1476titleFastRNABindR: Fast and Accurate Prediction of Protein-RNA Interface Residues
P478volume11

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cites work (P2860)
Q99604815Comprehensive Survey and Comparative Assessment of RNA-Binding Residue Predictions with Analysis by RNA Type
Q47845562Fast H-DROP: A thirty times accelerated version of H-DROP for interactive SVM-based prediction of helical domain linkers
Q60431912Partner‐specific Prediction of RNA‐binding Residues in Proteins: A Critical Assessment
Q39086521RBPPred: predicting RNA-binding proteins from sequence using SVM.

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