| scholarly article | Q13442814 |
| P50 | author | Trevor Bedford | Q28743793 |
| P2093 | author name string | Alekseyenko AV | |
| Baele G | |||
| Lemey P | |||
| Rambaut A | |||
| Suchard MA | |||
| P2860 | cites work | Relaxed phylogenetics and dating with confidence | Q21146068 |
| Direct evidence of extensive diversity of HIV-1 in Kinshasa by 1960 | Q22251093 | ||
| An African HIV-1 sequence from 1959 and implications for the origin of the epidemic | Q22251287 | ||
| Bayesian phylogenetics with BEAUti and the BEAST 1.7 | Q24286945 | ||
| Bayesian phylogenetic inference using DNA sequences: a Markov Chain Monte Carlo Method | Q28243160 | ||
| Bayesian phylogeography finds its roots | Q28259572 | ||
| Bayesian coalescent inference of past population dynamics from molecular sequences | Q28306728 | ||
| Estimating mutation parameters, population history and genealogy simultaneously from temporally spaced sequence data | Q28768988 | ||
| Bayesian inference of phylogeny and its impact on evolutionary biology | Q29547502 | ||
| Bayesian phylogenetic analysis of combined data | Q29547679 | ||
| Bayesian selection of continuous-time Markov chain evolutionary models | Q29615127 | ||
| Rates of evolutionary change in viruses: patterns and determinants | Q29616174 | ||
| A general comparison of relaxed molecular clock models | Q29618908 | ||
| Joint Bayesian Estimation of Alignment and Phylogeny | Q30047793 | ||
| Testing spatiotemporal hypothesis of bacterial evolution using methicillin-resistant Staphylococcus aureus ST239 genome-wide data within a bayesian framework | Q30396777 | ||
| Using time-structured data to estimate evolutionary rates of double-stranded DNA viruses | Q33549119 | ||
| Phylogeography takes a relaxed random walk in continuous space and time | Q34042383 | ||
| Choosing among Partition Models in Bayesian Phylogenetics | Q34407757 | ||
| Models for estimating bayes factors with applications to phylogeny and tests of monophyly | Q34447316 | ||
| Improving marginal likelihood estimation for Bayesian phylogenetic model selection | Q34571311 | ||
| Bayesian hypothesis testing of four-taxon topologies using molecular sequence data | Q36834285 | ||
| Should phylogenetic models be trying to "fit an elephant"? | Q38701562 | ||
| Assessing site-interdependent phylogenetic models of sequence evolution | Q40314108 | ||
| Model averaging and Bayes factor calculation of relaxed molecular clocks in Bayesian phylogenetics | Q40391834 | ||
| Estimating the rate of molecular evolution: incorporating non-contemporaneous sequences into maximum likelihood phylogenies | Q40619594 | ||
| Testing a molecular clock without an outgroup: derivations of induced priors on branch-length restrictions in a Bayesian framework | Q46724968 | ||
| Computing Bayes factors using thermodynamic integration. | Q51947404 | ||
| P433 | issue | 9 | |
| P407 | language of work or name | English | Q1860 |
| P921 | main subject | phylogenetics | Q171184 |
| demographics | Q2725376 | ||
| P304 | page(s) | 2157-67 | |
| P577 | publication date | 2012-09-01 | |
| P1433 | published in | Molecular Biology and Evolution | Q1992656 |
| P1476 | title | Improving the accuracy of demographic and molecular clock model comparison while accommodating phylogenetic uncertainty | |
| P478 | volume | 29 |
| Q90030892 | 19 Dubious Ways to Compute the Marginal Likelihood of a Phylogenetic Tree Topology |
| Q52587145 | A Bayesian phylogenetic study of the Dravidian language family. |
| Q57277626 | A Burmese amber fossil of Radula (Porellales, Jungermanniopsida) provides insights into the Cretaceous evolution of epiphytic lineages of leafy liverworts |
| Q60949915 | A Phylogenomic Framework and Divergence History of Cephalochordata Amphioxus |
| Q28596127 | A cautionary note on the use of Ornstein Uhlenbeck models in macroevolutionary studies |
| Q28655977 | A critical appraisal of the use of microRNA data in phylogenetics |
| Q92152991 | A global to local genomics analysis of Clostridioides difficile ST1/RT027 identifies cryptic transmission events in a northern Arizona healthcare network |
| Q35196814 | A hybrid phylogenetic-phylogenomic approach for species tree estimation in African Agama lizards with applications to biogeography, character evolution, and diversification |
| Q54215901 | A new "American" subgroup of African-lineage Chikungunya virus detected in and isolated from mosquitoes collected in Haiti, 2016. |
| Q93088604 | A novel host-adapted strain of Salmonella Typhimurium causes renal disease in olive ridley turtles (Lepidochelys olivacea) in the Pacific |
| Q45324649 | A phylogenomic analysis of Marek's disease virus reveals independent paths to virulence in Eurasia and North America. |
| Q30827069 | A reversal of fortunes: climate change 'winners' and 'losers' in Antarctic Peninsula penguins |
| Q34478508 | A sketch of language history in the Korean Peninsula |
| Q110445631 | A species of the genus Panophrys (Anura, Megophryidae) from southeastern Guizhou Province, China |
| Q36763244 | ASSESSING PHENOTYPIC CORRELATION THROUGH THE MULTIVARIATE PHYLOGENETIC LATENT LIABILITY MODEL. |
| Q34959662 | Accelerated rate of molecular evolution for vittarioid ferns is strong and not driven by selection. |
| Q36543226 | Accurate model selection of relaxed molecular clocks in bayesian phylogenetics |
| Q35152118 | Air travel is associated with intracontinental spread of dengue virus serotypes 1-3 in Brazil |
| Q35531274 | Among-character rate variation distributions in phylogenetic analysis of discrete morphological characters. |
| Q98665096 | An ancient tropical origin, dispersals via land bridges and Miocene diversification explain the subcosmopolitan disjunctions of the liverwort genus Lejeunea |
| Q28654997 | Analysis of 41 plant genomes supports a wave of successful genome duplications in association with the Cretaceous-Paleogene boundary |
| Q38368307 | Ancient Evolution and Dispersion of Human Papillomavirus Type 58 Variants |
| Q55885826 | Ancient mitochondrial genomes reveal the demographic history and phylogeography of the extinct, enigmatic thylacine (Thylacinus cynocephalus ) |
| Q92887090 | Ancient pathogen genomics as an emerging tool for infectious disease research |
| Q41421400 | Ancient vicariance and climate-driven extinction continental-wide disjunctions in Africa: the case of the Rand Flora genus Canarina (Campanulaceae). |
| Q94564611 | Animal Disease Surveillance in the 21st Century: Applications and Robustness of Phylodynamic Methods in Recent U.S. Human-Like H3 Swine Influenza Outbreaks |
| Q46249468 | Aridification driven diversification of fan-throated lizards from the Indian subcontinent |
| Q46991371 | Assessing species boundaries and the phylogenetic position of the rare Szechwan ratsnake, Euprepiophis perlaceus (Serpentes: Colubridae), using coalescent-based methods |
| Q97527867 | Avian Metapneumovirus subtype B around Europe: a phylodynamic reconstruction |
| Q35674796 | Avian influenza virus exhibits distinct evolutionary dynamics in wild birds and poultry |
| Q28660145 | BEAST 2: a software platform for Bayesian evolutionary analysis |
| Q36184520 | Babesia microti from humans and ticks hold a genomic signature of strong population structure in the United States |
| Q36797924 | Bayesian Inference Reveals Host-Specific Contributions to the Epidemic Expansion of Influenza A H5N1. |
| Q36213883 | Bayesian Morphological Clock Methods Resurrect Placoderm Monophyly and Reveal Rapid Early Evolution in Jawed Vertebrates |
| Q36273117 | Bayesian Total-Evidence Dating Reveals the Recent Crown Radiation of Penguins. |
| Q28652301 | Bayesian estimation of speciation and extinction from incomplete fossil occurrence data |
| Q34772835 | Bayesian evolutionary model testing in the phylogenomics era: matching model complexity with computational efficiency |
| Q62801921 | Bayesian inference of ancestral dates on bacterial phylogenetic trees |
| Q110445539 | Bayesian inference of species diffusion in the West African Agama agama species group (Reptilia, Agamidae) |
| Q46240577 | Bayesian molecular dating: opening up the black box. |
| Q90808353 | Bayesian phylodynamic analysis reveals the dispersal patterns of tobacco mosaic virus in China |
| Q55252536 | Bayesian phylogenetic and phylodynamic data integration using BEAST 1.10. |
| Q46985862 | Bayesian phylogeographic inferences reveal contrasting colonization dynamics among European groundwater isopods. |
| Q57100704 | Bayesian phylogeography and pathogenic characterisation of smallpox based on HA, ATI and CrmB genes |
| Q36272799 | Bayesian phylogeography of influenza A/H3N2 for the 2014-15 season in the United States using three frameworks of ancestral state reconstruction |
| Q27014975 | Bayesian tests of topology hypotheses with an example from diving beetles |
| Q61448604 | Biogeography of Korea's top predator, the yellow-throated Marten: evolutionary history and population dynamics |
| Q61445148 | Biogeography of the Caribbean Cyrtognatha spiders |
| Q51173898 | Bluetongue virus spread in Europe is a consequence of climatic, landscape and vertebrate host factors as revealed by phylogeographic inference. |
| Q93122340 | Burkholderia pseudomallei, the causative agent of melioidosis, is rare but ecologically established and widely dispersed in the environment in Puerto Rico |
| Q39070805 | By how much do we underestimate species diversity of liverworts using morphological evidence? An example from Australasian Plagiochila (Plagiochilaceae: Jungermanniopsida). |
| Q41718969 | Capsid coding region diversity of re-emerging lineage C foot-and-mouth disease virus serotype Asia1 from India. |
| Q57261237 | Capuchin monkey biogeography: understanding Sapajus Pleistocene range expansion and the current sympatry between Cebus and Sapajus |
| Q28629367 | Causations of phylogeographic barrier of some rocky shore species along the Chinese coastline |
| Q89900309 | Characterisation of HIV-1 Molecular Epidemiology in Nigeria: Origin, Diversity, Demography and Geographic Spread |
| Q59329991 | Characterising routes of H5N1 and H7N9 spread in China using Bayesian phylogeographical analysis |
| Q38815412 | Characterization of Colombian serotype 1 avian paramyxoviruses, 2008-2010. |
| Q64059023 | Characterization of a large cluster of HIV-1 A1 infections detected in Portugal and connected to several Western European countries |
| Q90746074 | Circulation of Chikungunya virus East-Central-South Africa genotype during an outbreak in 2016-17 in Piaui State, Northeast Brazil |
| Q59351477 | Classification and evolution of human papillomavirus genome variants: Alpha-5 (HPV26, 51, 69, 82), Alpha-6 (HPV30, 53, 56, 66), Alpha-11 (HPV34, 73), Alpha-13 (HPV54) and Alpha-3 (HPV61) |
| Q58788681 | Climate and host-plant associations shaped the evolution of ceutorhynch weevils throughout the Cenozoic |
| Q30907582 | Climate impacts on transocean dispersal and habitat in gray whales from the Pleistocene to 2100. |
| Q58556722 | Climatic and Soil Factors Shape the Demographical History and Genetic Diversity of a Deciduous Oak () in Northern China |
| Q28652901 | Clock model makes a large difference to age estimates of long-stemmed clades with no internal calibration: a test using Australian grasstrees |
| Q43928147 | ClockstaR: choosing the number of relaxed-clock models in molecular phylogenetic analysis |
| Q56794565 | Co-circulating mumps lineages at multiple geographic scales |
| Q64099784 | Co-circulation of genetically distinct highly pathogenic avian influenza A clade 2.3.4.4 (H5N6) viruses in wild waterfowl and poultry in Europe and East Asia, 2017-18 |
| Q46255085 | Coalescent-based delimitation outperforms distance-based methods for delineating less divergent species: the case of Kurixalus odontotarsus species group |
| Q58231110 | Colonization history of Mallorca Island by the European rabbit,Oryctolagus cuniculus, and the Iberian hare,Lepus granatensis(Lagomorpha: Leporidae) |
| Q40310866 | Colorful patterns indicate common ancestry in diverged tiger beetle taxa: Molecular phylogeny, biogeography, and evolution of elytral coloration of the genus Cicindela subgenus Sophiodela and its allies |
| Q63739926 | Combination of surveillance tools reveals that Yellow Fever virus can remain in the same Atlantic Forest area at least for three transmission seasons |
| Q89655316 | Combining genomics and epidemiology to track mumps virus transmission in the United States |
| Q66680353 | Comparative micro-epidemiology of pathogenic avian influenza virus outbreaks in a wild bird population |
| Q58751167 | Complete paternally inherited mitogenomes of two freshwater mussels and (Bivalvia: Unionidae) |
| Q33712044 | Complex Routes of Nosocomial Vancomycin-Resistant Enterococcus faecium Transmission Revealed by Genome Sequencing |
| Q90402636 | Complex patterns of reticulate evolution in opportunistic weeds (Potentilla L., Rosaceae), as revealed by low-copy nuclear markers |
| Q37224832 | Comprehensive Characterization of HIV-1 Molecular Epidemiology and Demographic History in the Brazilian Region Most Heavily Affected by AIDS. |
| Q92376654 | Computational Approaches and Challenges to Developing Universal Influenza Vaccines |
| Q35676575 | Concordant species delimitation from multiple independent evidence: A case study with the Pachytriton brevipes complex (Caudata: Salamandridae). |
| Q35010968 | Conservation phylogeography: does historical diversity contribute to regional vulnerability in European tree frogs (Hyla arborea)? |
| Q48108471 | Constraining uncertainty in the timescale of angiosperm evolution and the veracity of a Cretaceous Terrestrial Revolution |
| Q64939100 | Contrasting Paternal and Maternal Genetic Histories of Thai and Lao Populations. |
| Q38368310 | Contrasting morphology with molecular data: an approach to revision of species complexes based on the example of European Phoxinus (Cyprinidae). |
| Q36334334 | Contribution of Epidemiological Predictors in Unraveling the Phylogeographic History of HIV-1 Subtype C in Brazil |
| Q36031512 | Cross-validation to select Bayesian hierarchical models in phylogenetics |
| Q47222176 | Cryptic Lineage Differentiation Among Indo-Pacific Bottlenose Dolphins (Tursiops aduncus) in the Northwest Indian Ocean |
| Q36078886 | Cryptic species diversity in sub-Antarctic islands: A case study of Lepidonotothen |
| Q97636377 | Cultural variation impacts paternal and maternal genetic lineages of the Hmong-Mien and Sino-Tibetan groups from Thailand |
| Q28654919 | DNA barcodes and species distribution models evaluate threats of global climate changes to genetic diversity: a case study from Nanorana parkeri (Anura: Dicroglossidae) |
| Q33808480 | Dated tribe-wide whole chloroplast genome phylogeny indicates recurrent hybridizations within Triticeae |
| Q48188881 | Dating the Cryptococcus gattii Dispersal to the North American Pacific Northwest. |
| Q51146032 | Dating the Species Network: Allopolyploidy and Repetitive DNA Evolution in American Daisies (Melampodium sect. Melampodium, Asteraceae). |
| Q40059882 | Deciphering the Origin and Evolution of Hepatitis B Viruses by Means of a Family of Non-enveloped Fish Viruses |
| Q35856108 | Deep molecular divergence and exceptional morphological stasis in dwarf cannibal snails Nata sensu lato Watson, 1934 (Rhytididae) of southern Africa |
| Q40889499 | Deformed wing virus is a recent global epidemic in honeybees driven by Varroa mites |
| Q28661383 | Delayed colonisation of Acacia by thrips and the timing of host-conservatism and behavioural specialisation |
| Q47176962 | Demographic analysis of cyanobacteria based on the mutation rates estimated from an ancient ice core |
| Q35068058 | Dengue virus in sub-tropical northern and central Viet Nam: population immunity and climate shape patterns of viral invasion and maintenance |
| Q56333620 | Description of a widely distributed but overlooked amphipod species in the European Alps |
| Q27334010 | Descriptive Epidemiology and Whole Genome Sequencing Analysis for an Outbreak of Bovine Tuberculosis in Beef Cattle and White-Tailed Deer in Northwestern Minnesota |
| Q55084426 | Detection and phylogenetic characterization of arbovirus dual-infections among persons during a chikungunya fever outbreak, Haiti 2014. |
| Q89997741 | Detection of dengue virus type 2 of Indian origin in acute febrile patients in rural Kenya |
| Q35256056 | Determining the phylogenetic and phylogeographic origin of highly pathogenic avian influenza (H7N3) in Mexico. |
| Q39078370 | Different kinds of genetic markers permit inference of Paleolithic and Neolithic expansions in humans |
| Q37696935 | Disentangling the impact of within-host evolution and transmission dynamics on the tempo of HIV-1 evolution |
| Q91404414 | Disentangling the role of Africa in the global spread of H5 highly pathogenic avian influenza |
| Q52326067 | Disjunct distribution and distinct intraspecific diversification of Eothenomys melanogaster in South China. |
| Q90910827 | Dissecting the molecular evolution of fluoroquinolone-resistant Shigella sonnei |
| Q64912717 | Distinct YFV Lineages Co-circulated in the Central-Western and Southeastern Brazilian Regions From 2015 to 2018. |
| Q91757237 | Distinct rates and patterns of spread of the major HIV-1 subtypes in Central and East Africa |
| Q33575121 | Distinguishable epidemics of multidrug-resistant Salmonella Typhimurium DT104 in different hosts |
| Q100945803 | Distribution of genetic diversity reveals colonization patterns and philopatry of the loggerhead sea turtles across geographic scales |
| Q28831304 | Divergent evolutionary and epidemiological dynamics of cassava mosaic geminiviruses in Madagascar |
| Q101632296 | Diversification of North American natricine snakes |
| Q36414484 | Diversity and distribution of hantaviruses in South America |
| Q37268236 | Diversity in a honey bee pathogen: first report of a third master variant of the Deformed Wing Virus quasispecies |
| Q99249366 | Does the virus cross the road? Viral phylogeographic patterns among bobcat populations reflect a history of urban development |
| Q37246333 | Domestication and Divergence of Saccharomyces cerevisiae Beer Yeasts |
| Q47564394 | Dynamics of widespread foot-and-mouth disease virus serotypes A, O and Asia-1 in southern Asia: A Bayesian phylogenetic perspective. |
| Q89873419 | Early phylogenetic estimate of the effective reproduction number of SARS-CoV-2 |
| Q111629845 | Ecological and geological processes impacting speciation modes drive the formation of wide‐range disjunctions within tribe Putorieae (Rubiaceae) |
| Q40491295 | Effect of different vaccination strategies on IBV QX population dynamics and clinical outbreaks |
| Q28656090 | Effects of mitochondrial DNA rate variation on reconstruction of Pleistocene demographic history in a social avian species, Pomatostomus superciliosus |
| Q47198376 | Emergence as an outbreak of the HIV-1 CRF19_cpx variant in treatment-naïve patients in southern Spain. |
| Q61798369 | Emergence of Madariaga virus as a cause of acute febrile illness in children, Haiti, 2015-2016 |
| Q91969387 | Emergence of a Novel Salmonella enterica Serotype Reading Clonal Group Is Linked to Its Expansion in Commercial Turkey Production, Resulting in Unanticipated Human Illness in North America |
| Q62485445 | Emergence of the East-Central-South-African genotype of Chikungunya virus in Brazil and the city of Rio de Janeiro may have occurred years before surveillance detection |
| Q28649525 | Empirical calibrated radiocarbon sampler: a tool for incorporating radiocarbon-date and calibration error into Bayesian phylogenetic analyses of ancient DNA |
| Q101630575 | Endemic diversification in the mountains: genetic, morphological, and geographical differentiation of the Hemidactylus geckos in southwestern Arabia |
| Q92540731 | Enterococcus faecium genome dynamics during long-term asymptomatic patient gut colonization |
| Q38728551 | Eocene Loranthaceae pollen pushes back divergence ages for major splits in the family. |
| Q28603289 | Estimating Divergence Times and Substitution Rates in Rhizobia |
| Q39673654 | Estimating the Number of Subpopulations (K) in Structured Populations |
| Q35567253 | Estimating the temporal and spatial extent of gene flow among sympatric lizard populations (genus Sceloporus) in the southern Mexican highlands |
| Q57185648 | Europe was a hub for the global spread of potato virus S in the 19th century |
| Q35623346 | Evaluation of a Phylogenetic Marker Based on Genomic Segment B of Infectious Bursal Disease Virus: Facilitating a Feasible Incorporation of this Segment to the Molecular Epidemiology Studies for this Viral Agent |
| Q91292177 | Evidence of CPV2c introgression into Croatia and novel insights into phylogeny and cell tropism |
| Q40096501 | Evolution and spread of Venezuelan equine encephalitis complex alphavirus in the Americas |
| Q21284012 | Evolution of microgastropods (Ellobioidea, Carychiidae): integrating taxonomic, phylogenetic and evolutionary hypotheses |
| Q21133546 | Evolution of the Ainu language in space and time |
| Q42195873 | Evolution of the vesicular stomatitis viruses: divergence and codon usage bias |
| Q29394833 | Evolution of the viral hemorrhagic septicemia virus: Divergence, selection and origin |
| Q90705083 | Evolutionary Analysis of the VP1 and RNA-Dependent RNA Polymerase Regions of Human Norovirus GII.P17-GII.17 in 2013-2017 |
| Q30397618 | Evolutionary Dynamics of Pandemic Methicillin-Sensitive Staphylococcus aureus ST398 and Its International Spread via Routes of Human Migration |
| Q93102466 | Evolutionary Dynamics of the Lineage 2 West Nile Virus That Caused the Largest European Epidemic: Italy 2011-2018 |
| Q38598823 | Evolutionary Genetic Analysis Uncovers Multiple Species with Distinct Habitat Preferences and Antibiotic Resistance Phenotypes in the Stenotrophomonas maltophilia Complex. |
| Q52675489 | Evolutionary analysis of Porcine circovirus 3 (PCV3) indicates an ancient origin for its current strains and a worldwide dispersion. |
| Q41689628 | Evolutionary dynamics of foot-and-mouth disease virus O/ME-SA/Ind2001 lineage |
| Q42653747 | Evolutionary dynamics of language systems |
| Q90109603 | Evolutionary dynamics of lineage 2 West Nile virus in Europe, 2004-2018: Phylogeny, selection pressure and phylogeography |
| Q57029328 | Evolutionary history and spatio-temporal dynamics of dengue virus serotypes in an endemic region of Colombia |
| Q58744091 | Evolutionary history and spatiotemporal dynamics of the HIV-1 subtype B epidemic in Guatemala |
| Q58549213 | Evolutionary history of the endemic water shrew : Recurrent phylogeographic patterns in semi-aquatic mammals of the Iberian Peninsula |
| Q35222510 | Evolutionary relationships, species delimitation and biogeography of Eastern Afromontane horned chameleons (Chamaeleonidae: Trioceros) |
| Q46861984 | Exploring new dating approaches for parasites: the worldwide Apodanthaceae (Cucurbitales) as an example |
| Q35861969 | Fine Dissection of Human Mitochondrial DNA Haplogroup HV Lineages Reveals Paleolithic Signatures from European Glacial Refugia |
| Q90739255 | Fish diversification at the pace of geomorphological changes: evolutionary history of western Iberian Leuciscinae (Teleostei: Leuciscidae) inferred from multilocus sequence data |
| Q42233635 | Flies on the move: an inherited virus mirrors Drosophila melanogaster's elusive ecology and demography |
| Q91512261 | Flight over the Proto-Caribbean seaway: Phylogeny and macroevolution of Neotropical Anaeini leafwing butterflies |
| Q58786780 | Floral evolution by simplification in Monanthotaxis (Annonaceae) and hypotheses for pollination system shifts |
| Q28601776 | Fossil biogeography: a new model to infer dispersal, extinction and sampling from palaeontological data |
| Q56554647 | Fossil evidence of eupolypod ferns in the mid-Cretaceous of Myanmar |
| Q90462619 | Free to Circulate: An Update on the Epidemiological Dynamics of Porcine Circovirus 2 (PCV-2) in Italy Reveals the Role of Local Spreading, Wild Populations, and Foreign Countries |
| Q52589934 | Full-Genome Characterization and Genetic Evolution of West African Isolates of Bagaza Virus. |
| Q36317071 | Gene flow, population growth and a novel substitution rate estimate in a subtidal rock specialist, the black-faced blenny Tripterygion delaisi (Perciformes, Blennioidei, Tripterygiidae) from the Adriatic Sea |
| Q28652784 | Gene transfers shaped the evolution of de novo NAD+ biosynthesis in eukaryotes |
| Q37228114 | Genealogical Working Distributions for Bayesian Model Testing with Phylogenetic Uncertainty |
| Q59791624 | Genetic Diversity and the Spatio-Temporal Analyses of Hantaviruses in Shandong Province, China |
| Q92454880 | Genetic Variability of Chikungunya Virus in Southern Mexico |
| Q46236976 | Genetic analysis of a rabies virus host shift event reveals within-host viral dynamics in a new host |
| Q57092653 | Genetic and antigenic relationship of foot-and-mouth disease virus serotype O isolates with the vaccine strain O1/BFS |
| Q64082274 | Genetic differentiation in the southern population of the Fathead Minnow Rafinesque (Actinopterygii: Cyprinidae) |
| Q49955664 | Genetic diversity and cross-species transmission of kobuviruses in Vietnam. |
| Q90950412 | Genetic structure of Mycoplasma ovipneumoniae informs pathogen spillover dynamics between domestic and wild Caprinae in the western United States |
| Q64075842 | Genetic structure, phylogeography, and demography of (Bivalvia) from East Pacific as revealed by mtDNA: Implications to conservation |
| Q21133803 | Genetic variability among complete human respiratory syncytial virus subgroup A genomes: bridging molecular evolutionary dynamics and epidemiology |
| Q64247597 | Genome Analysis of Coxsackievirus A4 Isolates From Hand, Foot, and Mouth Disease Cases in Shandong, China |
| Q91937193 | Genome and plasmid diversity of Extended-Spectrum β-Lactamase-producing Escherichia coli ST131 - tracking phylogenetic trajectories with Bayesian inference |
| Q28803990 | Genome sequencing reveals Zika virus diversity and spread in the Americas |
| Q33643088 | Genome wide analysis of the evolution of Senecavirus A from swine clinical material and assembly yard environmental samples. |
| Q36916592 | Genome-based characterization of hospital-adapted Enterococcus faecalis lineages |
| Q43897644 | Genomic Variation and Evolution of Vibrio parahaemolyticus ST36 over the Course of a Transcontinental Epidemic Expansion |
| Q37658340 | Genomic analysis of Salmonella enterica serotype Paratyphi A during an outbreak in Cambodia, 2013-2015. |
| Q90723943 | Genomic characterization and phylogenetic analysis of SARS-COV-2 in Italy |
| Q110697371 | Genomic diversity and demographic history of the Dromiciops genus (Marsupialia: Microbiotheriidae) |
| Q92092198 | Genomic epidemiology of syphilis reveals independent emergence of macrolide resistance across multiple circulating lineages |
| Q30145573 | Genomic epidemiology reveals multiple introductions of Zika virus into the United States |
| Q47584455 | Genomic history of the seventh pandemic of cholera in Africa. |
| Q64981037 | Genomic insights into the ancient spread of Lyme disease across North America. |
| Q31117121 | Genomics of speciation and introgression in Princess cichlid fishes from Lake Tanganyika |
| Q36898064 | Genomics reveals historic and contemporary transmission dynamics of a bacterial disease among wildlife and livestock |
| Q57206473 | Geographical and Ecological Drivers of Mitonuclear Genetic Divergence in a Mediterranean Grasshopper |
| Q28559902 | Geographical structure, narrow species ranges, and Cenozoic diversification in a pantropical clade of epiphyllous leafy liverworts |
| Q37738186 | Global evolutionary history and spatio-temporal dynamics of dengue virus type 2. |
| Q59803985 | Global fingerprint of humans on the distribution of Bartonella bacteria in mammals |
| Q43167545 | Global genetic variation and transmission dynamics of H9N2 avian influenza virus. |
| Q39306485 | Global phylogeography and evolutionary history of Shigella dysenteriae type 1. |
| Q22242275 | HIV epidemiology. The early spread and epidemic ignition of HIV-1 in human populations |
| Q91269396 | Hepatitis B Virus: Alternative phylogenetic hypotheses and its impact on molecular evolution inferences |
| Q54795804 | Hidden diversity of marine borderline lichens and a new order of fungi: Collemopsidiales (Dothideomyceta) |
| Q34004744 | High diversity of hepatitis B virus genotypes in Panamanian blood donors: a molecular analysis of new variants |
| Q58723025 | High-resolution diffusion pattern of human infections by Salmonella enterica serovar Napoli in Northern Italy explained through phylogeography |
| Q91525614 | Highly divergent lineage of narrow-headed vole from the Late Pleistocene Europe |
| Q90407876 | Horizontal Plasmid Transfer Promotes the Dissemination of Asian Acute Hepatopancreatic Necrosis Disease and Provides a Novel Mechanism for Genetic Exchange and Environmental Adaptation |
| Q37238817 | Host ecology determines the dispersal patterns of a plant virus |
| Q30151791 | Host-pathogen evolutionary signatures reveal dynamics and future invasions of vampire bat rabies |
| Q30361550 | Human immunodeficiency virus type 1 (HIV-1) subtype B epidemic in Panama is mainly driven by dissemination of country-specific clades. |
| Q35237795 | Hybridization effects and genetic diversity of the common and black-tufted marmoset (Callithrix jacchus and Callithrix penicillata) mitochondrial control region |
| Q37617633 | Identification and evolutionary dynamics of two novel human coronavirus OC43 genotypes associated with acute respiratory infections: phylogenetic, spatiotemporal and transmission network analyses |
| Q41935445 | Identification of a divergent genotype of equine arteritis virus from South American donkeys |
| Q36267935 | Identification of a large, fast-expanding HIV-1 subtype B transmission cluster among MSM in Valencia, Spain. |
| Q52334060 | Impact of the tree prior on estimating clock rates during epidemic outbreaks. |
| Q28655692 | Improved calibration of the human mitochondrial clock using ancient genomes |
| Q28709244 | Improving Bayesian population dynamics inference: a coalescent-based model for multiple loci |
| Q26765962 | Inferences from tip-calibrated phylogenies: a review and a practical guide |
| Q39023260 | Inferring Trees |
| Q33749440 | Inferring heterogeneous evolutionary processes through time: from sequence substitution to phylogeography |
| Q55221042 | Inferring population dynamics of HIV-1 subtype C epidemics in Eastern Africa and Southern Brazil applying different Bayesian phylodynamics approaches. |
| Q46272693 | Inferring the demographic history of an oligophagous grasshopper: Effects of climatic niche stability and host-plant distribution |
| Q95320602 | Initial Upper Palaeolithic Homo sapiens from Bacho Kiro Cave, Bulgaria |
| Q116673335 | Insights into the geographical origin and phylogeographical patterns of Paradisaea birds-of-paradise |
| Q36316168 | Insights on the evolutionary origin of Detarioideae, a clade of ecologically dominant tropical African trees. |
| Q28650857 | Integrating fossils, phylogenies, and niche models into biogeography to reveal ancient evolutionary history: the case of Hypericum (hypericaceae) |
| Q28606482 | Interglacial refugia preserved high genetic diversity of the Chinese mole shrew in the mountains of southwest China |
| Q37658156 | Introduction and establishment of fluoroquinolone-resistant Shigella sonnei into Bhutan |
| Q35102579 | Investigating sex-specific dynamics using uniparental markers: West New Guinea as a case study |
| Q60321171 | Is Amazonia a ‘museum’ for Neotropical trees? The evolution of the Brownea clade (Detarioideae, Leguminosae) |
| Q28661341 | Is ecological speciation a major trend in aphids? Insights from a molecular phylogeny of the conifer-feeding genus Cinara |
| Q46267589 | Is subterranean lifestyle reversible? Independent and recent large-scale dispersal into surface waters by two species of the groundwater amphipod genus Niphargus |
| Q40167797 | Is the sword moss (Bryoxiphium) a preglacial Tertiary relict? |
| Q89594517 | Islands as a crossroad of evolutionary lineages: A case study of Centaurea sect. Centaurea (Compositae) from Sardinia (Mediterranean Basin) |
| Q90603916 | Isolation of Mayaro Virus from a Venezuelan Patient with Febrile Illness, Arthralgias, and Rash: Further Evidence of Regional Strain Circulation and Possible Long-Term Endemicity |
| Q28607350 | Key innovation or adaptive change? A test of leaf traits using Triodiinae in Australia |
| Q28829164 | Lack of Spatial Subdivision for the Snapper Lutjanus purpureus (Lutjanidae - Perciformes) from Southwest Atlantic Based on Multi-Locus Analyses |
| Q28654670 | Land-bridge calibration of molecular clocks and the post-glacial Colonization of Scandinavia by the Eurasian field vole Microtus agrestis |
| Q31032879 | Late Glacial Demographic Expansion Motivates a Clock Overhaul for Population Genetics |
| Q36136680 | Lineage diversification of fringe-toed lizards (Phrynosomatidae: Uma notata complex) in the Colorado Desert: Delimiting species in the presence of gene flow |
| Q21132287 | Linguistic Phylogenies Support Back-Migration from Beringia to Asia |
| Q28603577 | Local Population Structure and Patterns of Western Hemisphere Dispersal for Coccidioides spp., the Fungal Cause of Valley Fever |
| Q37186725 | MERS-CoV recombination: implications about the reservoir and potential for adaptation |
| Q34622803 | Make the most of your samples: Bayes factor estimators for high-dimensional models of sequence evolution |
| Q34172432 | Marginal likelihood estimate comparisons to obtain optimal species delimitations in Silene sect. Cryptoneurae (Caryophyllaceae). |
| Q29305753 | Micro-evolutionary diversification among Indian Ocean parrots: temporal and spatial changes in phylogenetic diversity as a consequence of extinction and invasion |
| Q34881980 | Mitochondrial diversity in human head louse populations across the Americas |
| Q50058640 | Mitochondrial phylogeny, divergence history and high-altitude adaptation of grassland caterpillars (Lepidoptera: Lymantriinae: Gynaephora) inhabiting the Tibetan Plateau |
| Q57095537 | Mitogenome evolution in the last surviving woolly mammoth population reveals neutral and functional consequences of small population size |
| Q30276829 | Mitogenomes reveal diversity of the European Lyme borreliosis vector Ixodes ricinus in Italy |
| Q40160091 | Modeling Character Change Heterogeneity in Phylogenetic Analyses of Morphology through the Use of Priors |
| Q47205799 | Molecular Epidemiology and Evolution of European Bat Lyssavirus 2. |
| Q35620809 | Molecular Epidemiology and Phylogenetic Analysis of Human Adenovirus Caused an Outbreak in Taiwan during 2011 |
| Q37196550 | Molecular Evolution and Phylogeography of Co-circulating IHNV and VHSV in Italy |
| Q93014042 | Molecular Evolution of the Protease Region in Norovirus Genogroup II |
| Q60949793 | Molecular Evolutionary Analyses of the RNA-Dependent RNA Polymerase Region in Norovirus Genogroup II |
| Q92556899 | Molecular Evolutionary Analysis of Potato Virus Y Infecting Potato Based on the VPg Gene |
| Q28645596 | Molecular Phylogeny of Grassland Caterpillars (Lepidoptera: Lymantriinae: Gynaephora) Endemic to the Qinghai-Tibetan Plateau |
| Q31007195 | Molecular data from contemporary and historical collections reveal a complex story of cryptic diversification in the Varanus (Polydaedalus) niloticus Species Group |
| Q54667062 | Molecular data support the existence of two species of the Antarctic fish genus Cryodraco (Channichthyidae) |
| Q89575126 | Molecular dating and viral load growth rates suggested that the eclipse phase lasted about a week in HIV-1 infected adults in East Africa and Thailand |
| Q34388641 | Molecular dating, evolutionary rates, and the age of the grasses. |
| Q39224652 | Molecular diversity in irregular or refugee immigrant patients with HBV-genotype-E infection living in the metropolitan area of Naples |
| Q36126624 | Molecular epidemiology of Rabbit Haemorrhagic Disease Virus in Australia: when one became many |
| Q98463521 | Molecular evolution of coxsackievirus A24v in Cuba over 23-years, 1986-2009 |
| Q36195481 | Molecular evolution of type 2 porcine reproductive and respiratory syndrome viruses circulating in Vietnam from 2007 to 2015. |
| Q46457842 | Molecular phylogenetic analyses identify Alpine differentiation and dysploid chromosome number changes as major forces for the evolution of the European endemic Phyteuma (Campanulaceae). |
| Q100501363 | Molecular phylogenetics of Lotus (Leguminosae) with emphasis in the tempo and patterns of colonization in the Macaronesian region |
| Q36210779 | Molecular phylogenetics of New World searobins (Triglidae; Prionotinae). |
| Q110451177 | Molecular phylogenetics of sub-Saharan African natricine snakes, and the biogeographic origins of the Seychelles endemic Lycognathophis seychellensis |
| Q107671075 | Molecular phylogeny and biogeography of Pabstiella (Pleurothallidinae: Orchidaceae) highlight the importance of the Atlantic Rainforest for speciation in the genus |
| Q46261801 | Molecular phylogeny of Entomobrya (Collembola: Entomobryidae) from China: colour pattern groups and multiple origins |
| Q35883345 | Molecular phylogeny of the Ellobiidae (Gastropoda: Panpulmonata) supports independent terrestrial invasions |
| Q31139517 | Molecular phylogeny of the aquatic beetle family Noteridae (Coleoptera: Adephaga) with an emphasis on data partitioning strategies |
| Q35890775 | Molecular phylogeny supports S-chaetae as a key character better than jumping organs and body scales in classification of Entomobryoidea (Collembola). |
| Q34233370 | Molecular species delimitation of a symbiotic fig-pollinating wasp species complex reveals extreme deviation from reciprocal partner specificity |
| Q28657378 | Molecular tracing of the emergence, diversification, and transmission of S. aureus sequence type 8 in a New York community |
| Q38257608 | Molecular-clock methods for estimating evolutionary rates and timescales |
| Q93270620 | Monkeypox virus emergence in wild chimpanzees reveals distinct clinical outcomes and viral diversity |
| Q37733283 | Monophyly of Wolbachia pipientis genomes within Drosophila melanogaster: geographic structuring, titre variation and host effects across five populations |
| Q92296303 | Multigene phylogeny, phylogeography and population structure of Podarcis cretensis species group in south Balkans |
| Q110445477 | Multilocus molecular systematics and evolution in time and space of Calligrapha (Coleoptera: Chrysomelidae, Chrysomelinae) |
| Q36284531 | Multilocus phylogeny of alligator lizards (Elgaria, Anguidae): Testing mtDNA introgression as the source of discordant molecular phylogenetic hypotheses |
| Q104454713 | Multilocus phylogeny, species delimitation and biogeography of Iberian valvatiform springsnails (Caenogastropoda: Hydrobiidae), with the description of a new genus |
| Q28649720 | Multilocus species trees show the recent adaptive radiation of the mimetic heliconius butterflies |
| Q28604212 | Multiple Cross-Species Transmission Events of Human Adenoviruses (HAdV) during Hominine Evolution |
| Q36264288 | Multiple Introductions and Recent Spread of the Emerging Human Pathogen Mycobacterium ulcerans across Africa |
| Q28655823 | Multiple introductions of Zika virus into the United States revealed through genomic epidemiology |
| Q55251065 | Navigating the currents of seascape genomics: how spatial analyses can augment population genomic studies. |
| Q58085168 | Niche adaptation and viral transmission of human papillomaviruses from archaic hominins to modern humans |
| Q90265661 | Non-human Primate Papillomaviruses Share Similar Evolutionary Histories and Niche Adaptation as the Human Counterparts |
| Q64983289 | Noninvasive western lowland gorilla's health monitoring: A decade of simian immunodeficiency virus surveillance in southern Cameroon. |
| Q33849152 | Novel approaches for Spatial and Molecular Surveillance of Porcine Reproductive and Respiratory Syndrome Virus (PRRSv) in the United States. |
| Q30838201 | Novel non-parametric models to estimate evolutionary rates and divergence times from heterochronous sequence data. |
| Q61445474 | One Health Genomic Surveillance of Escherichia coli Demonstrates Distinct Lineages and Mobile Genetic Elements in Isolates from Humans versus Livestock |
| Q36290324 | One species or four? Yes!...and, no. Or, arbitrary assignment of lineages to species obscures the diversification processes of Neotropical fishes |
| Q39199146 | Ongoing geographical spread of Tomato yellow leaf curl virus. |
| Q41903302 | Organellar Genomes from a ∼5,000-Year-Old Archaeological Maize Sample Are Closely Related to NB Genotype |
| Q57091977 | Origin and Dissemination of Hepatitis B Virus Genotype C in East Asia Revealed by Phylodynamic Analysis and Historical Correlates |
| Q89997606 | Origin and diversification of Xanthomonas citri subsp. citri pathotypes revealed by inclusive phylogenomic, dating, and biogeographic analyses |
| Q28608150 | Origin and higher-level diversification of acariform mites - evidence from nuclear ribosomal genes, extensive taxon sampling, and secondary structure alignment |
| Q30396026 | Origin of modern syphilis and emergence of a pandemic Treponema pallidum cluster |
| Q91967211 | PCR-based detection and genetic characterization of porcine parvoviruses in South Korea in 2018 |
| Q40814490 | Palaeo-islands as refugia and sources of genetic diversity within volcanic archipelagos: the case of the widespread endemic Canarina canariensis (Campanulaceae). |
| Q55275416 | Persistence of Yellow fever virus outside the Amazon Basin, causing epidemics in Southeast Brazil, from 2016 to 2018. |
| Q60328621 | Persistence of phylogeographic footprints helps to understand cryptic diversity detected in two marine amphipods widespread in the Mediterranean basin |
| Q35541192 | Phycas: software for Bayesian phylogenetic analysis |
| Q27330389 | Phylodynamic Characterization of an Ocular-Tropism Coxsackievirus A24 Variant |
| Q57272961 | Phylodynamic Model Adequacy Using Posterior Predictive Simulations |
| Q94461804 | Phylodynamic analysis and evaluation of the balance between anthropic and environmental factors affecting IBV spreading among Italian poultry farms |
| Q53698779 | Phylodynamic analysis and molecular diversity of the avian infectious bronchitis virus of chickens in Brazil. |
| Q34455526 | Phylodynamic analysis of clinical and environmental Vibrio cholerae isolates from Haiti reveals diversification driven by positive selection |
| Q40699515 | Phylodynamic analysis of porcine circovirus type 2 reveals global waves of emerging genotypes and the circulation of recombinant forms |
| Q30658880 | Phylodynamic analysis of the canine distemper virus hemagglutinin gene |
| Q47806662 | Phylodynamic and Genetic Diversity of Canine Parvovirus Type 2c in Taiwan. |
| Q35782268 | Phylodynamic reconstruction of the spatiotemporal transmission and demographic history of coxsackievirus B2. |
| Q52371575 | Phylodynamics and evolutionary epidemiology of African swine fever p72-CVR genes in Eurasia and Africa. |
| Q30376063 | Phylodynamics of H5N1 Highly Pathogenic Avian Influenza in Europe, 2005-2010: Potential for Molecular Surveillance of New Outbreaks. |
| Q92960696 | Phylodynamics of Influenza A/H1N1pdm09 in India Reveals Circulation Patterns and Increased Selection for Clade 6b Residues and Other High Mortality Mutants |
| Q40044283 | Phylodynamics of Yellow Fever Virus in the Americas: new insights into the origin of the 2017 Brazilian outbreak |
| Q92058414 | Phylodynamics of sunflower chlorotic mottle virus, an emerging pathosystem |
| Q30353669 | Phylodynamics of the HIV-1 epidemic in Cuba. |
| Q36910692 | Phylodynamics of vampire bat-transmitted rabies in Argentina. |
| Q90595344 | Phylodynamics reveals extinction-recolonization dynamics underpin apparently endemic vampire bat rabies in Costa Rica |
| Q40191459 | Phylogenetic Analyses Suggest that Factors Other Than the Capsid Protein Play a Role in the Epidemic Potential of GII.2 Norovirus |
| Q42693290 | Phylogenetic Factor Analysis |
| Q40219028 | Phylogenetic Inference Using RevBayes. |
| Q59350063 | Phylogenetic analysis of West Nile Virus in Maricopa County, Arizona: Evidence for dynamic behavior of strains in two major lineages in the American Southwest |
| Q97597461 | Phylogenetic and phylodynamic analyses of SARS-CoV-2 |
| Q37254352 | Phylogenetic patterns of human coxsackievirus B5 arise from population dynamics between two genogroups and reveal evolutionary factors of molecular adaptation and transmission |
| Q47249240 | Phylogenomics |
| Q35558051 | Phylogenomics of phrynosomatid lizards: conflicting signals from sequence capture versus restriction site associated DNA sequencing |
| Q57212265 | Phylogeny and divergence times of suckers (Cypriniformes: Catostomidae) inferred from Bayesian total-evidence analyses of molecules, morphology, and fossils |
| Q92288474 | Phylogeny of Neotropical Sicarius sand spiders suggests frequent transitions from deserts to dry forests despite antique, broad-scale niche conservatism |
| Q60046543 | Phylogeny, character evolution and spatiotemporal diversification of the species-rich and world-wide distributed tribe Rubieae (Rubiaceae) |
| Q35759962 | Phylogeny, species delimitation and convergence in the South American bothriurid scorpion genus Brachistosternus Pocock 1893: Integrating morphology, nuclear and mitochondrial DNA. |
| Q64100397 | Phylogeographic Analyses of the East Asian Endemic Genus and the Role of the East Asian Monsoon System in Shaping a North-South Divergence Pattern in China |
| Q46248782 | Phylogeographic and population insights of the Asian common toad (Bufo gargarizans) in Korea and China: population isolation and expansions as response to the ice ages |
| Q34630481 | Phylogeographic reconstruction of African yellow fever virus isolates indicates recent simultaneous dispersal into east and west Africa |
| Q64971178 | Phylogeography and ecological niche modeling unravel the evolutionary history of the Yarkand hare, Lepus yarkandensis (Mammalia: Leporidae), through the Quaternary. |
| Q39367770 | Phylogeography by diffusion on a sphere: whole world phylogeography |
| Q57050461 | Phylogeography of a freshwater crustacean species complex reflects a long-gone archipelago |
| Q57483668 | Phylogeography of the New Zealand giraffe weevil Lasiorhynchus barbicornis (Coleoptera: Brentidae): A comparison of biogeographic boundaries |
| Q30571130 | Phylogeography of the Vermilion Flycatcher species complex: Multiple speciation events, shifts in migratory behavior, and an apparent extinction of a Galápagos-endemic bird species |
| Q38721064 | Pleistocene range shifts, refugia and the origin of widespread species in western Palaearctic water beetles |
| Q55952074 | Population Demography and Genetic Diversity in the Pleistocene Cave Lion |
| Q40778066 | Population genetic structure and approximate Bayesian computation analyses reveal the southern origin and northward dispersal of the oriental fruit moth Grapholita molesta (Lepidoptera: Tortricidae) in its native range. |
| Q36268497 | Population genomics of Mycobacterium tuberculosis in the Inuit |
| Q52595421 | Population genomics of finless porpoises reveal an incipient cetacean species adapted to freshwater. |
| Q28710255 | Population genomics of the Wolbachia endosymbiont in Drosophila melanogaster |
| Q39500288 | Porcine circovirus type 2 (PCV2) evolution before and after the vaccination introduction: A large scale epidemiological study. |
| Q64063774 | Positive Selection at Key Residues in the HIV Envelope Distinguishes Broad and Strain-Specific Plasma Neutralizing Antibodies |
| Q28008291 | Postcopulatory sexual selection influences baculum evolution in primates and carnivores |
| Q37701019 | Posterior predictive Bayesian phylogenetic model selection |
| Q56978760 | Postglacial expansion of the Arctic keystone copepod Calanus glacialis |
| Q90319310 | Potato virus Y; the Andean connection |
| Q38651639 | Predicting spatial spread of rabies in skunk populations using surveillance data reported by the public |
| Q36249125 | Quantifying predictors for the spatial diffusion of avian influenza virus in China |
| Q38929803 | Quaternary range and demographic expansion of Liolaemus darwinii (Squamata: Liolaemidae) in the Monte Desert of Central Argentina using Bayesian phylogeography and ecological niche modelling |
| Q36143738 | Range size heritability and diversification patterns in the liverwort genus Radula |
| Q59354788 | Rapid evolutionary dynamics of pepper mild mottle virus |
| Q36197945 | Rapid postglacial diversification and long-term stasis within the songbird genus Junco: phylogeographic and phylogenomic evidence |
| Q40967620 | Rates and relations of mitochondrial genome evolution across the Echinoidea, with special focus on the superfamily Odontophora |
| Q55283832 | Rates of Mutation and Recombination in Siphoviridae Phage Genome Evolution over Three Decades. |
| Q30352309 | Real-time characterization of the molecular epidemiology of an influenza pandemic |
| Q35769810 | Reassortment and distinct evolutionary dynamics of Rift Valley Fever virus genomic segments |
| Q40762992 | Recent and rapid population growth and range expansion of the Lyme disease tick vector, Ixodes scapularis, in North America. |
| Q64124397 | Recent establishment of tick-borne encephalitis foci with distinct viral lineages in the Helsinki area, Finland |
| Q55882855 | Reconstructing the genetic history of late Neanderthals |
| Q33873771 | Reconstructing the recent West Nile virus lineage 2 epidemic in Europe and Italy using discrete and continuous phylogeography. |
| Q34520767 | Refining the Y chromosome phylogeny with southern African sequences |
| Q35908936 | Repeated evolution of carnivory among Indo-Australian rodents |
| Q98158074 | Reporting of New tick-borne encephalitis virus strains isolated in Eastern Siberia (Russia) in 1960-2011 and explaining them in an evolutionary context using Bayesian phylogenetic inference |
| Q46257729 | Resolving taxonomic turbulence and uncovering cryptic diversity in the musk turtles (Sternotherus) using robust demographic modeling |
| Q36281189 | Resolving the Origin of Rabbit Hemorrhagic Disease Virus: Insights from an Investigation of the Viral Stocks Released in Australia |
| Q56461182 | Revised systematics and higher classification of pierid butterflies (Lepidoptera: Pieridae) based on molecular data |
| Q36000872 | Revisiting the taxonomical classification of Porcine Circovirus type 2 (PCV2): still a real challenge |
| Q41406503 | Rice yellow mottle virus in Madagascar and in the Zanzibar Archipelago; island systems and evolutionary time scale to study virus emergence |
| Q96125614 | Rivers of Indochina as potential drivers of lineage diversification in the spotted flying lizard (Draco maculatus) species complex |
| Q92942256 | Serotype-specific evolutionary patterns of antimicrobial-resistant Salmonella enterica |
| Q64359227 | Sexual Dichromatism Drives Diversification within a Major Radiation of African Amphibians |
| Q43975184 | Simulating and detecting autocorrelation of molecular evolutionary rates among lineages |
| Q28652426 | Simultaneously estimating evolutionary history and repeated traits phylogenetic signal: applications to viral and host phenotypic evolution |
| Q37669800 | Singleton Sequence Type 382, an Emerging Clonal Group of Listeria monocytogenes Associated with Three Multistate Outbreaks Linked to Contaminated Stone Fruit, Caramel Apples, and Leafy Green Salad |
| Q92571670 | Six Impossible Things before Breakfast: Assumptions, Models, and Belief in Molecular Dating |
| Q91405063 | Size increase without genetic divergence in the Eurasian water shrew Neomys fodiens |
| Q28649677 | So far away, yet so close: strong genetic structure in Homonota uruguayensis (Squamata, Phyllodactylidae), a species with restricted geographic distribution in the Brazilian and Uruguayan Pampas |
| Q36743738 | Spatial Temporal Dynamics and Molecular Evolution of Re-Emerging Rabies Virus in Taiwan. |
| Q28818384 | Spatial and Temporal Phylogeny of Border Disease Virus in Pyrenean Chamois (Rupicapra p. pyrenaica) |
| Q36615566 | Spatial and temporal evolution of Lassa virus in the natural host population in Upper Guinea |
| Q34785251 | Spatiotemporal Phylogenetic Analysis and Molecular Characterisation of Infectious Bursal Disease Viruses Based on the VP2 Hyper-Variable Region. |
| Q30365978 | Spatiotemporal dynamics of dissemination of non-pandemic HIV-1 subtype B clades in the Caribbean region. |
| Q30402781 | Spatiotemporal dynamics of influenza A(H1N1)pdm09 in Brazil during the pandemic and post-pandemic periods. |
| Q34520599 | Spatiotemporal dynamics of simian immunodeficiency virus brain infection in CD8+ lymphocyte-depleted rhesus macaques with neuroAIDS. |
| Q38677874 | Spatiotemporal evolutionary epidemiology of H5N1 highly pathogenic avian influenza in West Africa and Nigeria, 2006-2015. |
| Q46258867 | Speciation history of a species complex of Primulina eburnea (Gesneriaceae) from limestone karsts of southern China, a biodiversity hot spot. |
| Q90024769 | Species delimitation and mitogenome phylogenetics in the subterranean genus Pseudoniphargus (Crustacea: Amphipoda) |
| Q33620807 | Species delimitation in asexual insects of economic importance: The case of black scale (Parasaissetia nigra), a cosmopolitan parthenogenetic pest scale insect |
| Q30777152 | Species delimitation using genome-wide SNP data |
| Q39730909 | Species delimitation without prior knowledge: DISSECT reveals extensive cryptic speciation in the Silene aegyptiaca complex (Caryophyllaceae). |
| Q34659633 | Species history and divergence times of viviparous and oviparous Chinese toad-headed sand lizards (Phrynocephalus) on the Qinghai-Tibetan Plateau. |
| Q36057446 | Species relationships and divergence times in beeches: new insights from the inclusion of 53 young and old fossils in a birth-death clock model |
| Q28649998 | Spiders on a Hot Volcanic Roof: Colonisation Pathways and Phylogeography of the Canary Islands Endemic Trap-Door Spider Titanidiops canariensis (Araneae, Idiopidae) |
| Q37621643 | Spread, circulation, and evolution of the Middle East respiratory syndrome coronavirus |
| Q35961823 | Streptococcus agalactiae clones infecting humans were selected and fixed through the extensive use of tetracycline |
| Q39202748 | Strong spatial structure, Pliocene diversification and cryptic diversity in the Neotropical dry forest spider Sicarius cariri |
| Q39116648 | Systematic longitudinal survey of invasive Escherichia coli in England demonstrates a stable population structure only transiently disturbed by the emergence of ST131. |
| Q28817321 | Taxonomy and nomenclature of the polymorphic European high mountain species Androsace vitaliana (L.) Lapeyr. (Primulaceae) |
| Q39150228 | Temporal phylogeography of Yersinia pestis in Madagascar: Insights into the long-term maintenance of plague. |
| Q35165738 | Testing the efficiency of nested barriers to dispersal in the Mediterranean high mountain plant Edraianthus graminifolius (Campanulaceae). |
| Q96303553 | The Gene Flow Direction of Geographically Distinct Phytophthora infestans Populations in China Corresponds With the Route of Seed Potato Exchange |
| Q57094126 | The HIV-1 Subtype B Epidemic in French Guiana and Suriname Is Driven by Ongoing Transmissions of Pandemic and Non-pandemic Lineages |
| Q28596002 | The Impact of Reconstruction Methods, Phylogenetic Uncertainty and Branch Lengths on Inference of Chromosome Number Evolution in American Daisies (Melampodium, Asteraceae) |
| Q56895491 | The Role of aDNA in Understanding the Coevolutionary Patterns of Human Sexually Transmitted Infections |
| Q92818237 | The age and diversification of metacrangonyctid subterranean amphipod crustaceans revisited |
| Q110451282 | The biogeography of Dromiciops in southern South America: Middle Miocene transgressions, speciation and associations with Nothofagus |
| Q36978676 | The comparative genomics of human respiratory syncytial virus subgroups A and B: genetic variability and molecular evolutionary dynamics |
| Q39107500 | The complete maternal and paternal mitochondrial genomes of Unio crassus: Mitochondrial molecular clock and the overconfidence of molecular dating |
| Q46261071 | The complete phylogeny of pangolins: scaling up resources for the molecular tracing of the most trafficked mammals on Earth. |
| Q38613443 | The confounding effects of hybridization on phylogenetic estimation in the New Zealand cicada genus Kikihia |
| Q114382953 | The earliest Denisovans and their cultural adaptation |
| Q39825674 | The effect of genetic structure on molecular dating and tests for temporal signal |
| Q64078221 | The evolution and phylodynamics of serotype A and SAT2 foot-and-mouth disease viruses in endemic regions of Africa |
| Q92251816 | The evolutionary dynamics of DENV 4 genotype I over a 60-year period |
| Q28650020 | The evolutionary origins of the southern ocean Philobryid bivalves: hidden biodiversity, ancient persistence |
| Q28658702 | The explosive radiation of Cheirolophus (Asteraceae, Cardueae) in Macaronesia |
| Q93156951 | The first known fossil Uma: ecological evolution and the origins of North American fringe-toed lizards |
| Q28541827 | The genealogical population dynamics of HIV-1 in a large transmission chain: bridging within and among host evolutionary rates |
| Q55425765 | The genomic landscape at a late stage of stickleback speciation: High genomic divergence interspersed by small localized regions of introgression. |
| Q92330153 | The geography of evolutionary divergence in the highly endemic avifauna from the Sierra Madre del Sur, Mexico |
| Q54251432 | The global distribution and spread of the mobilized colistin resistance gene mcr-1. |
| Q51450453 | The global spread of Middle East respiratory syndrome: an analysis fusing traditional epidemiological tracing and molecular phylodynamics. |
| Q30916505 | The impact of Quaternary climate oscillations on divergence times and historical population sizes in Thylamys opossums from the Andes |
| Q42213600 | The impact of calibration and clock-model choice on molecular estimates of divergence times |
| Q28598082 | The origin of widespread species in a poor dispersing lineage (diving beetle genus Deronectes) |
| Q59241198 | The peril of dating beetles |
| Q104571308 | The phylogeographic history of tomato mosaic virus in Eurasia |
| Q35061527 | The phylogeography and spatiotemporal spread of south-central skunk rabies virus |
| Q40814027 | The southwestern Carpathians as an ancient centre of diversity of freshwater gammarid amphipods: insights from the Gammarus fossarum species complex |
| Q55249486 | The substitution rate of HIV-1 subtypes: a genomic approach. |
| Q35175892 | The towering orogeny of New Guinea as a trigger for arthropod megadiversity |
| Q28655214 | Thermal niche evolution and geographical range expansion in a species complex of western Mediterranean diving beetles |
| Q40053762 | Think globally, act locally: Phylodynamic reconstruction of infectious bronchitis virus (IBV) QX genotype (GI-19 lineage) reveals different population dynamics and spreading patterns when evaluated on different epidemiological scales. |
| Q36194357 | Time-scale of minor HIV-1 complex circulating recombinant forms from Central and West Africa |
| Q39356598 | Transmission between Archaic and Modern Human Ancestors during the Evolution of the Oncogenic Human Papillomavirus 16. |
| Q58555239 | Transmission pathways and spillover of an erythrocytic bacterial pathogen from domestic cats to wild felids |
| Q57211829 | Transoceanic Stepping-stones between Cretaceous waterfalls? The enigmatic biogeography of pantropical Oocyclus cascade beetles |
| Q57092758 | Tuberculosis outbreak investigation using phylodynamic analysis |
| Q58115737 | Turnover of southern cypresses in the post-Gondwanan world: extinction, transoceanic dispersal, adaptation and rediversification |
| Q38690634 | Uncovering missing pieces: duplication and deletion history of arrestins in deuterostomes |
| Q94461357 | Under-the-Radar Dengue Virus Infections in Natural Populations of Aedes aegypti Mosquitoes |
| Q30727379 | Understanding the evolutionary structural variability and target specificity of tick salivary Kunitz peptides using next generation transcriptome data. |
| Q30359668 | Unifying viral genetics and human transportation data to predict the global transmission dynamics of human influenza H3N2. |
| Q91582119 | Unravelling population processes over the Late Pleistocene driving contemporary genetic divergence in Palearctic buzzards |
| Q50320002 | Unravelling the complicated evolutionary and dissemination history of HIV-1M subtype A lineages |
| Q35924371 | Up high and down low: Molecular systematics and insight into the diversification of the ground beetle genus Rhadine LeConte. |
| Q41922272 | Urban landscapes can change virus gene flow and evolution in a fragmentation-sensitive carnivore. |
| Q64076027 | Use of Genomics to Investigate Historical Importation of Shiga Toxin-Producing Escherichia coli Serogroup O26 and Nontoxigenic Variants into New Zealand |
| Q35955486 | Use of bacterial whole-genome sequencing to investigate local persistence and spread in bovine tuberculosis |
| Q50000691 | Using Phylogenomic Data to Explore the Effects of Relaxed Clocks and Calibration Strategies on Divergence Time Estimation: Primates as a Test Case |
| Q35688174 | Using Whole Genome Analysis to Examine Recombination across Diverse Sequence Types of Staphylococcus aureus |
| Q30804393 | Using multiple relaxed-clock models to estimate evolutionary timescales from DNA sequence data |
| Q36438631 | Variable evolutionary routes to host establishment across repeated rabies virus host shifts among bats |
| Q51236142 | Vertically transmitted rhabdoviruses are found across three insect families and have dynamic interactions with their hosts. |
| Q35823909 | Viral meningitis epidemics and a single, recent, recombinant and anthroponotic origin of swine vesicular disease virus |
| Q38905350 | Western equine encephalitis virus: evolutionary analysis of a declining alphavirus based on complete genome sequences |
| Q56983231 | Whole genome analysis of local Kenyan and global sequences unravels the epidemiological and molecular evolutionary dynamics of RSV genotype ON1 strains |
| Q36000537 | Whole-Genome Sequencing Allows for Improved Identification of Persistent Listeria monocytogenes in Food-Associated Environments |
| Q45062709 | Whole-Genome Sequencing of Drug-Resistant Salmonella enterica Isolates from Dairy Cattle and Humans in New York and Washington States Reveals Source and Geographic Associations |
| Q91809267 | Yellow Fever Virus Genotyping Tool and Investigation of Suspected Adverse Events Following Yellow Fever Vaccination |
| Q28596370 | Young relicts and old relicts: a novel palaeoendemic vertebrate from the Australian Central Uplands |
| Q30145571 | Zika virus evolution and spread in the Americas |
Search more.