| P2093 | author name string | Zhenhai Zhang | |
| | Juan Yu | |
| | Zhen Su | |
| | Wenying Xu | |
| | Yi Ling | |
| | Jiangang Wei | |
| P2860 | cites work | Interdependency of brassinosteroid and auxin signaling in Arabidopsis | Q21146414 |
| | Ultrafast and memory-efficient alignment of short DNA sequences to the human genome | Q21183894 |
| | Mapping and quantifying mammalian transcriptomes by RNA-Seq | Q22122035 |
| | Genome sequence of the palaeopolyploid soybean | Q22122200 |
| | PMRD: plant microRNA database | Q24644711 |
| | High-throughput functional annotation and data mining with the Blast2GO suite | Q24657550 |
| | Phospholipid:diacylglycerol acyltransferase: an enzyme that catalyzes the acyl-CoA-independent formation of triacylglycerol in yeast and plants | Q24675283 |
| | The Soybean Genome Database (SoyGD): a browser for display of duplicated, polyploid, regions and sequence tagged sites on the integrated physical and genetic maps of Glycine max. | Q25257861 |
| | Gene Expression Omnibus: NCBI gene expression and hybridization array data repository | Q27860523 |
| | MicroRNAs: genomics, biogenesis, mechanism, and function | Q27861070 |
| | Prediction of plant microRNA targets | Q28219387 |
| | Origin, biogenesis, and activity of plant microRNAs | Q28236171 |
| | Soybean knowledge base (SoyKB): a web resource for integration of soybean translational genomics and molecular breeding | Q28660696 |
| | The Arabidopsis thaliana TAG1 mutant has a mutation in a diacylglycerol acyltransferase gene | Q28679010 |
| | Tissue-specific whole transcriptome sequencing in castor, directed at understanding triacylglycerol lipid biosynthetic pathways | Q28732241 |
| | LegumeIP: an integrative database for comparative genomics and transcriptomics of model legumes | Q28740958 |
| | Microarray data normalization and transformation | Q29617789 |
| | microRNA-directed phasing during trans-acting siRNA biogenesis in plants | Q29618562 |
| | The microarray explorer tool for data mining of cDNA microarrays: application for the mammary gland | Q30619632 |
| | Analysis of microarray data using Z score transformation | Q30787499 |
| | Novel and nodulation-regulated microRNAs in soybean roots. | Q33327595 |
| | SoyXpress: a database for exploring the soybean transcriptome | Q33356810 |
| | Sequencing and analysis of approximately 40,000 soybean cDNA clones from a full-length-enriched cDNA library. | Q33377390 |
| | Identification and expression analysis of miRNAs from nitrogen-fixing soybean nodules | Q33393154 |
| | Cloning and characterization of small RNAs from Medicago truncatula reveals four novel legume-specific microRNA families | Q33474537 |
| | Large-scale analysis of Arabidopsis transcription reveals a basal co-regulation network | Q33499876 |
| | SoyDB: a knowledge database of soybean transcription factors | Q33524916 |
| | Prediction of novel miRNAs and associated target genes in Glycine max. | Q33528180 |
| | SoyTEdb: a comprehensive database of transposable elements in the soybean genome | Q33531930 |
| | Tetramer of a 21-base pair synthetic element confers seed expression and transcriptional enhancement in response to water stress and abscisic acid. | Q45932786 |
| | Expression of Umbelopsis ramanniana DGAT2A in seed increases oil in soybean. | Q45940247 |
| | Analysis of acyl fluxes through multiple pathways of triacylglycerol synthesis in developing soybean embryos. | Q46070362 |
| | Identification of soybean microRNAs and their targets | Q46348295 |
| | Deciphering gene regulatory networks that control seed development and maturation in Arabidopsis. | Q46598404 |
| | A phenylalanine in DGAT is a key determinant of oil content and composition in maize | Q46751643 |
| | Dual DNA binding property of ABA insensitive 3 like factors targeted to promoters responsive to ABA and auxin | Q46790874 |
| | Regulation of abscisic acid-induced transcription | Q48001818 |
| | Conservation and divergence of plant microRNA genes. | Q48091519 |
| | Identification and characterization of new plant microRNAs using EST analysis. | Q48136551 |
| | Silencing of soybean seed storage proteins results in a rebalanced protein composition preserving seed protein content without major collateral changes in the metabolome and transcriptome. | Q50525163 |
| | Soybean oil biosynthesis: role of diacylglycerol acyltransferases. | Q50764779 |
| | WRINKLED1 specifies the regulatory action of LEAFY COTYLEDON2 towards fatty acid metabolism during seed maturation in Arabidopsis. | Q51989502 |
| | Interaction between composite elements in the napA promoter: both the B-box ABA-responsive complex and the RY/G complex are necessary for seed-specific expression. | Q52174610 |
| | Disruption of an overlapping E-box/ABRE motif abolished high transcription of the napA storage-protein promoter in transgenic Brassica napus seeds | Q71561065 |
| | Alteration of seed fatty acid composition by an ethyl methanesulfonate-induced mutation in Arabidopsis thaliana affecting diacylglycerol acyltransferase activity | Q72321216 |
| | The TAG1 locus of Arabidopsis encodes for a diacylglycerol acyltransferase | Q73224373 |
| | The acyltransferase GPAT5 is required for the synthesis of suberin in seed coat and root of Arabidopsis | Q79677903 |
| | Expression profiling reveals fundamental biological differences in acute myeloid leukemia with isolated trisomy 8 and normal cytogenetics | Q95751079 |
| | Mutant alleles of FAD2-1A and FAD2-1Bcombine to produce soybeans with the high oleic acid seed oil trait | Q33688510 |
| | Transactivation of the Brassica napus napin promoter by ABI3 requires interaction of the conserved B2 and B3 domains of ABI3 with different cis-elements: B2 mediates activation through an ABRE, whereas B3 interacts with an RY/G-box | Q33921236 |
| | PlantCARE, a database of plant cis-acting regulatory elements and a portal to tools for in silico analysis of promoter sequences. | Q34010549 |
| | Cytoscape Web: an interactive web-based network browser | Q34110503 |
| | ATTED-II updates: condition-specific gene coexpression to extend coexpression analyses and applications to a broad range of flowering plants | Q34566240 |
| | SoyProDB: A database for the identification of soybean seed proteins | Q34592219 |
| | Plant cis-acting regulatory DNA elements (PLACE) database: 1999 | Q34691479 |
| | SGMD: the Soybean Genomics and Microarray Database | Q34937740 |
| | Soybean oil: genetic approaches for modification of functionality and total content | Q35005393 |
| | psRNATarget: a plant small RNA target analysis server | Q35075585 |
| | A genome-wide association study of seed protein and oil content in soybean. | Q35079367 |
| | Two B3 domain transcriptional repressors prevent sugar-inducible expression of seed maturation genes in Arabidopsis seedlings | Q35616751 |
| | An Arabidopsis gene network based on the graphical Gaussian model. | Q36098278 |
| | Bayesian network analysis of signaling networks: a primer | Q36108368 |
| | Identification of acyltransferases required for cutin biosynthesis and production of cutin with suberin-like monomers. | Q36157018 |
| | Reconstituting plant miRNA biogenesis | Q36786965 |
| | ATTED-II provides coexpressed gene networks for Arabidopsis | Q37202743 |
| | Functional symmetry of the B3 network controlling seed development | Q37240313 |
| | Soybean GmbZIP123 gene enhances lipid content in the seeds of transgenic Arabidopsis plants | Q37255307 |
| | Nanoridges that characterize the surface morphology of flowers require the synthesis of cutin polyester | Q37458473 |
| | The soybean Dof-type transcription factor genes, GmDof4 and GmDof11, enhance lipid content in the seeds of transgenic Arabidopsis plants | Q38298212 |
| | Reverse engineering cellular networks. | Q38303089 |
| | agriGO: a GO analysis toolkit for the agricultural community | Q38373934 |
| | PlaNet: combined sequence and expression comparisons across plant networks derived from seven species | Q38502841 |
| | SoyBase, the USDA-ARS soybean genetics and genomics database | Q38508038 |
| | Resequencing of 31 wild and cultivated soybean genomes identifies patterns of genetic diversity and selection | Q39817345 |
| | AthaMap: an online resource for in silico transcription factor binding sites in the Arabidopsis thaliana genome | Q40403083 |
| | Gene expression during plant embryogenesis and germination: an overview | Q40800964 |
| | Oleosins and oil bodies in seeds and other organs | Q41230989 |
| | Rank of correlation coefficient as a comparable measure for biological significance of gene coexpression | Q41790382 |
| | ATTED-II: a database of co-expressed genes and cis elements for identifying co-regulated gene groups in Arabidopsis | Q41813918 |
| | Acyl-lipid metabolism | Q42128281 |
| | Genome-wide identification of regulatory DNA elements and protein-binding footprints using signatures of open chromatin in Arabidopsis. | Q42657893 |
| | An integrated transcriptome atlas of the crop model Glycine max, and its use in comparative analyses in plants | Q43090452 |
| | DGAT1, DGAT2 and PDAT expression in seeds and other tissues of epoxy and hydroxy fatty acid accumulating plants | Q43184237 |
| | Vernonia DGATs increase accumulation of epoxy fatty acids in oil. | Q43192885 |
| | Complete transcriptome of the soybean root hair cell, a single-cell model, and its alteration in response to Bradyrhizobium japonicum infection | Q43236828 |
| | Endogenous, tissue-specific short interfering RNAs silence the chalcone synthase gene family in glycine max seed coats | Q43263732 |
| | Application of cDNA microarrays to examine gene expression differences in schizophrenia | Q43750661 |
| | Genetic control of soybean seed oil: II. QTL and genes that increase oil concentration without decreasing protein or with increased seed yield | Q45018627 |
| | WRINKLED1 encodes an AP2/EREB domain protein involved in the control of storage compound biosynthesis in Arabidopsis. | Q45120671 |
| P4510 | describes a project that uses | Cytoscape | Q3699942 |
| P433 | issue | 1 | |
| P407 | language of work or name | English | Q1860 |
| P921 | main subject | transcriptome | Q252857 |
| P304 | page(s) | 271 | |
| P577 | publication date | 2014-04-08 | |
| P1433 | published in | BMC Genomics | Q15765854 |
| P1476 | title | SFGD: a comprehensive platform for mining functional information from soybean transcriptome data and its use in identifying acyl-lipid metabolism pathways | |
| P478 | volume | 15 | |