Site-specific labelling with a metal chelator for protein-structure refinement.

scientific article

Site-specific labelling with a metal chelator for protein-structure refinement. is …
instance of (P31):
scholarly articleQ13442814

External links are
P6179Dimensions Publication ID1007210239
P356DOI10.1023/B:JNMR.0000032610.17058.FE
P698PubMed publication ID15213433
P5875ResearchGate publication ID8495673

P50authorGottfried OttingQ21994180
Guido PintacudaQ32415757
P2093author name stringAnatoly Sharipo
Ainars Leonchiks
Ahmad Moshref
P2860cites workThe NMR structure of the 38 kDa U1A protein - PIE RNA complex reveals the basis of cooperativity in regulation of polyadenylation by human U1A proteinQ27621996
De novo determination of protein structure by NMR using orientational and long-range order restraintsQ27622416
Structural insight into the mechanisms of targeting and signaling of focal adhesion kinaseQ27638457
Determination of local protein structure by spin label difference 2D NMR: the region neighboring Asp61 of subunit c of the F1F0 ATP synthaseQ27730355
Solution structure of the DNA-binding domain and model for the complex of multifunctional hexameric arginine repressor with DNAQ27746093
Backbone dynamics of a free and phosphopeptide-complexed Src homology 2 domain studied by 15N NMR relaxationQ27860508
Torsion angle dynamics for NMR structure calculation with the new program DYANAQ27860808
Gadolinium(III) Chelates as MRI Contrast Agents: Structure, Dynamics, and ApplicationsQ28212229
Nuclear magnetic dipole interactions in field-oriented proteins: information for structure determination in solutionQ29041975
Efficient computation of three-dimensional protein structures in solution from nuclear magnetic resonance data using the program DIANA and the supporting programs CALIBA, HABAS and GLOMSAQ29616475
Utilization of site-directed spin labeling and high-resolution heteronuclear nuclear magnetic resonance for global fold determination of large proteins with limited nuclear overhauser effect dataQ29617299
A method for distance determination in proteins using a designed metal ion binding site and site-directed spin labeling: evaluation with T4 lysozymeQ33666023
NMR spectroscopy: a multifaceted approach to macromolecular structureQ34081179
Bifunctional chelators for therapeutic lanthanide radiopharmaceuticalsQ34136549
Principles and biophysical applications of lanthanide-based probesQ34623600
Protein global fold determination using site-directed spin and isotope labelingQ36281875
The cellulose-binding domains from Cellulomonas fimi beta-1, 4-glucanase CenC bind nitroxide spin-labeled cellooligosaccharides in multiple orientations.Q38326744
EDTA-derivatized deoxythymidine as a tool for rapid determination of protein binding polarity to DNA by intermolecular paramagnetic relaxation enhancementQ38354239
Lanthanide chelates as bilayer alignment tools in NMR studies of membrane-associated peptidesQ41704900
Derivation of structural restraints using a thiol-reactive chelator.Q44151254
Longitudinal (1)H relaxation optimization in TROSY NMR spectroscopy.Q44188597
Breaking symmetry in the structure determination of (large) symmetric protein dimers.Q44258182
Novel techniques for weak alignment of proteins in solution using chemical tags coordinating lanthanide ions.Q44949191
Improving the accuracy of NMR structures of large proteins using pseudocontact shifts as long-range restraints.Q47231800
Angular dependence of dipole-dipole-Curie-spin cross-correlation effects in high-spin and low-spin paramagnetic myoglobin.Q47696672
PSEUDYANA for NMR structure calculation of paramagnetic metalloproteins using torsion angle molecular dynamicsQ47817036
Fast structure-based assignment of 15N HSQC spectra of selectively 15N-labeled paramagnetic proteinsQ48012037
Cross correlation rates between Curie spin and dipole-dipole relaxation in paramagnetic proteins: the case of cerium substituted calbindin D9k.Q52035520
Paramagnetic relaxation as a tool for solution structure determination: Clostridium pasteurianum ferredoxin as an example.Q52253536
Lanthanide ions bind specifically to an added "EF-hand" and orient a membrane protein in micelles for solution NMR spectroscopy.Q52541067
One-dimensional nuclear Overhauser effects and peak intensity measurements.Q52542820
Do NOE distances contain enough information to assess the relative populations of multi-conformer structures?Q52888394
Recent advances in site-directed spin labeling of proteinsQ56902488
Structural characterization of proteins with an attached ATCUN motif by paramagnetic relaxation enhancement NMR spectroscopy.Q57202389
The Solution Structure Refinement of the Paramagnetic Reduced High-Potential Iron-Sulfur Protein I from Ectothiorhodospira Halophila by Using Stable Isotope Labeling and Nuclear RelaxationQ57673735
Protein Alignment by a Coexpressed Lanthanide-Binding Tag for the Measurement of Residual Dipolar CouplingsQ58062307
Paramagnetically Induced Residual Dipolar Couplings for Solution Structure Determination of Lanthanide Binding ProteinsQ58484060
The ATCUN Domain as a Probe of Intermolecular Interactions: Application to Calmodulin−Peptide ComplexesQ58484412
Structure-independent cross-validation between residual dipolar couplings originating from internal and external orienting mediaQ58619164
Incorporation of an EDTA-metal complex at a rationally selected site within a protein: application to EDTA-iron DNA affinity cleaving with catabolite gene activator protein (CAP) and CroQ67505524
NMR studies of the major coat protein of bacteriophage M13. Structural information of gVIIIp in dodecylphosphocholine micellesQ71735161
N-(iodoacetyl)-p-phenylenediamine-EDTA: a reagent for high-efficiency incorporation of an EDTA-metal complex at a rationally selected site within a proteinQ72812500
Detection of nucleotide- and F-actin-induced movements in the switch II helix of the skeletal myosin using its differential oxidative cleavage mediated by an iron-EDTA complex disulfide-linked to the strong actin binding siteQ73046473
Calculation of z-coordinates and orientational restraints using a metal binding tagQ73270059
Characterization of long-range structure in the denatured state of staphylococcal nuclease. I. Paramagnetic relaxation enhancement by nitroxide spin labelsQ73335302
Characterization of long-range structure in the denatured state of staphylococcal nuclease. II. Distance restraints from paramagnetic relaxation and calculation of an ensemble of structuresQ73335305
Assessing the effect of conformational averaging on the measured values of observablesQ73922452
Geometry dependent two-dimensional heteronuclear multiplet effects in paramagnetic proteinsQ74112811
Spin-state selection filters for the measurement of heteronuclear one-bond coupling constantsQ77622953
P433issue3
P304page(s)351-361
P577publication date2004-07-01
P1433published inJournal of Biomolecular NMRQ3186900
P1476titleSite-specific labelling with a metal chelator for protein-structure refinement.
P478volume29

Reverse relations

cites work (P2860)
Q577466274,4′-Dithiobisdipicolinic Acid: A Small and Convenient Lanthanide Binding Tag for Protein NMR Spectroscopy
Q91955121A Double-Armed, Hydrophilic Transition Metal Complex as a Paramagnetic NMR Probe
Q92816934Active-Site Targeting Paramagnetic Probe for Matrix Metalloproteinases
Q41986543Cobalt-based paramagnetic probe to study RNA-protein interactions by NMR.
Q55090420Compact, hydrophilic, lanthanide-binding tags for paramagnetic NMR spectroscopy.
Q27678400Convenient method for resolving degeneracies due to symmetry of the magnetic susceptibility tensor and its application to pseudo contact shift-based protein–protein complex structure determination
Q30406734Cys-Ph-TAHA: a lanthanide binding tag for RDC and PCS enhanced protein NMR.
Q58002345Domain–domain motions in proteins from time-modulated pseudocontact shifts
Q36259474Elucidating transient macromolecular interactions using paramagnetic relaxation enhancement
Q24616920Engineering encodable lanthanide-binding tags into loop regions of proteins
Q57746643Engineering of a bis-chelator motif into a protein α-helix for rigid lanthanide binding and paramagnetic NMR spectroscopy
Q26992268Expanding the utility of NMR restraints with paramagnetic compounds: background and practical aspects
Q57833563Generation of Pseudocontact Shifts in Proteins with Lanthanides Using Small “Clickable” Nitrilotriacetic Acid and Iminodiacetic Acid Tags
Q36370855Impact of spin label rigidity on extent and accuracy of distance information from PRE data.
Q33795387Interpreting protein chemical shift data
Q42092890Multiple alignment of membrane proteins for measuring residual dipolar couplings using lanthanide ions bound to a small metal chelator
Q36226313NMR spectroscopy of paramagnetic metalloproteins
Q30428673PARAssign--paramagnetic NMR assignments of protein nuclei on the basis of pseudocontact shifts
Q27660285PCS-based structure determination of protein–protein complexes
Q54489297Paramagnetic doping of a 7TM membrane protein in lipid bilayers by Gd³⁺-complexes for solid-state NMR spectroscopy.
Q37520719Paramagnetic labelling of proteins and oligonucleotides for NMR.
Q36014489Practical aspects of (1)H transverse paramagnetic relaxation enhancement measurements on macromolecules.
Q30362181Refinement of protein structure against non-redundant carbonyl 13C NMR relaxation.
Q59480105Residual Dipolar Couplings for the Configurational and Conformational Analysis of Organic Molecules
Q54457201Site-specific labelling of proteins with a rigid lanthanide-binding tag.
Q27683597Solution structure of the SH3 domain of DOCK180
Q34324850Structure of the split PH domain and distinct lipid-binding properties of the PH-PDZ supramodule of alpha-syntrophin
Q27644695The Par-3 NTD adopts a PB1-like structure required for Par-3 oligomerization and membrane localization
Q33671554Theory, practice, and applications of paramagnetic relaxation enhancement for the characterization of transient low-population states of biological macromolecules and their complexes.
Q47552902Towards Determination of Distances Between Nanoparticles and Grafted Paramagnetic Ions by NMR Relaxation.
Q30388255Tunable paramagnetic relaxation enhancements by [Gd(DPA)(3)] (3-) for protein structure analysis
Q27655606Two-point anchoring of a lanthanide-binding peptide to a target protein enhances the paramagnetic anisotropic effect
Q33595258Visualizing lowly-populated regions of the free energy landscape of macromolecular complexes by paramagnetic relaxation enhancement
Q34464287Visualizing transient dark states by NMR spectroscopy.

Search more.