scholarly article | Q13442814 |
P6179 | Dimensions Publication ID | 1003905845 |
P356 | DOI | 10.1186/S13068-016-0441-1 |
P932 | PMC publication ID | 4736482 |
P698 | PubMed publication ID | 26839589 |
P5875 | ResearchGate publication ID | 292616740 |
P50 | author | Panagiotis G. Kougias | Q55835136 |
Giorgio Valle | Q56477247 | ||
Stefano Campanaro | Q56573665 | ||
Irini Angelidaki | Q41804134 | ||
Laura Treu | Q42775940 | ||
P2093 | author name string | Davide De Francisci | |
P2860 | cites work | The metagenomics RAST server - a public resource for the automatic phylogenetic and functional analysis of metagenomes | Q21284200 |
Insights into the phylogeny and coding potential of microbial dark matter | Q24490632 | ||
Taxonomic composition and gene content of a methane-producing microbial community isolated from a biogas reactor | Q47586647 | ||
Microbial analysis in biogas reactors suffering by foaming incidents. | Q51433391 | ||
Anaerobic Mono- and Co-digestion of Mechanically Pretreated Meadow Grass for Biogas Production | Q57825728 | ||
The microcosm of a biogas fermenter: Comparison of moderate hyperthermophilic (60°C) with thermophilic (55°C) conditions | Q59152440 | ||
Microbial community structure in a biogas digester utilizing the marine energy crop Saccharina latissima | Q59298687 | ||
The impact of genomic variability on gene expression in environmentalSaccharomyces cerevisiaestrains | Q61240614 | ||
Mass balance studies with 14C-labeled 2,4,6-trinitrotoluene (TNT) mediated by an Anaerobic desulfovibrio species and an Aerobic serratia species | Q77526950 | ||
Data, information, knowledge and principle: back to metabolism in KEGG | Q24568332 | ||
HMMER web server: interactive sequence similarity searching | Q24603071 | ||
Bacterial community structures are unique and resilient in full-scale bioenergy systems | Q24603709 | ||
Fast gapped-read alignment with Bowtie 2 | Q27860699 | ||
Eubacteria and archaea communities in seven mesophile anaerobic digester plants in Germany | Q28648162 | ||
Pfam: the protein families database | Q28660698 | ||
Characterization of a biogas-producing microbial community by short-read next generation DNA sequencing | Q28727221 | ||
Trimmomatic: a flexible trimmer for Illumina sequence data | Q29547278 | ||
BEDTools: a flexible suite of utilities for comparing genomic features | Q29547332 | ||
TM4: a free, open-source system for microarray data management and analysis | Q29547339 | ||
Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy | Q29547619 | ||
Predictive functional profiling of microbial communities using 16S rRNA marker gene sequences | Q29615050 | ||
FLASH: fast length adjustment of short reads to improve genome assemblies | Q29615113 | ||
KAAS: an automatic genome annotation and pathway reconstruction server | Q29617232 | ||
Metagenomic discovery of biomass-degrading genes and genomes from cow rumen | Q29618058 | ||
MetaCluster 5.0: a two-round binning approach for metagenomic data for low-abundance species in a noisy sample | Q30564037 | ||
Metagenomics: read length matters | Q33314518 | ||
Effect of sulfate on methanogenic communities that degrade unsaturated and saturated long-chain fatty acids (LCFA). | Q33368417 | ||
Diversity of the resident microbiota in a thermophilic municipal biogas plant | Q33372368 | ||
Towards the definition of a core of microorganisms involved in anaerobic digestion of sludge | Q33412346 | ||
Phylogenetic characterization of a biogas plant microbial community integrating clone library 16S-rDNA sequences and metagenome sequence data obtained by 454-pyrosequencing | Q33456308 | ||
Potential impact of process parameters upon the bacterial diversity in the mesophilic anaerobic digestion of beet silage. | Q33855199 | ||
Elucidation of methanogenic coenzyme biosyntheses: from spectroscopy to genomics | Q33959164 | ||
Interactive metagenomic visualization in a Web browser | Q34036161 | ||
Genomic insights to SAR86, an abundant and uncultivated marine bacterial lineage | Q34101446 | ||
Untangling genomes from metagenomes: revealing an uncultured class of marine Euryarchaeota | Q34149345 | ||
High-density PhyloChip profiling of stimulated aquifer microbial communities reveals a complex response to acetate amendment | Q34203146 | ||
GroopM: an automated tool for the recovery of population genomes from related metagenomes. | Q34284167 | ||
Effect of ammonium and acetate on methanogenic pathway and methanogenic community composition | Q34342733 | ||
Genome sequences of rare, uncultured bacteria obtained by differential coverage binning of multiple metagenomes | Q34346732 | ||
A metagenomic study of the microbial communities in four parallel biogas reactors | Q34355223 | ||
PhyloPhlAn is a new method for improved phylogenetic and taxonomic placement of microbes | Q34363801 | ||
Products of Anaerobic 2,4,6-Trinitrotoluene (TNT) Transformation by Clostridium bifermentans | Q34423909 | ||
Complete genome sequence of Thermanaerovibrio acidaminovorans type strain (Su883). | Q34558660 | ||
KOBAS 2.0: a web server for annotation and identification of enriched pathways and diseases | Q35075729 | ||
New steady-state microbial community compositions and process performances in biogas reactors induced by temperature disturbances | Q35109952 | ||
Tackling soil diversity with the assembly of large, complex metagenomes | Q35121676 | ||
Towards molecular biomarkers for biogas production from lignocellulose-rich substrates | Q35160706 | ||
Binning metagenomic contigs by coverage and composition | Q35251310 | ||
Expanded microbial genome coverage and improved protein family annotation in the COG database | Q35254493 | ||
Microbial diversity and dynamicity of biogas reactors due to radical changes of feedstock composition | Q35475189 | ||
New mode of energy metabolism in the seventh order of methanogens as revealed by comparative genome analysis of “Candidatus methanoplasma termitum”. | Q35514553 | ||
Energy Conservation in Acetogenic Bacteria | Q35577559 | ||
Functionally redundant but dissimilar microbial communities within biogas reactors treating maize silage in co-fermentation with sugar beet silage | Q35705670 | ||
Biogas Upgrading via Hydrogenotrophic Methanogenesis in Two-Stage Continuous Stirred Tank Reactors at Mesophilic and Thermophilic Conditions | Q35781907 | ||
Microbial community dynamics in replicate anaerobic digesters exposed sequentially to increasing organic loading rate, acidosis, and process recovery. | Q35965046 | ||
MetaBAT, an efficient tool for accurately reconstructing single genomes from complex microbial communities | Q36015586 | ||
Bacterial phosphotransferase system (PTS) in carbohydrate uptake and control of carbon metabolism. | Q36289795 | ||
Detailed analysis of metagenome datasets obtained from biogas-producing microbial communities residing in biogas reactors does not indicate the presence of putative pathogenic microorganisms | Q36803555 | ||
The future of anaerobic digestion and biogas utilization. | Q37393372 | ||
Ecophysiology of syntrophic communities that degrade saturated and unsaturated long-chain fatty acids | Q37505221 | ||
The SEED and the Rapid Annotation of microbial genomes using Subsystems Technology (RAST). | Q37661996 | ||
Gene and translation initiation site prediction in metagenomic sequences | Q39585994 | ||
Profiling of the metabolically active community from a production-scale biogas plant by means of high-throughput metatranscriptome sequencing | Q39651404 | ||
Effect of medium composition and sludge removal on the production, composition, and architecture of thermophilic (55 degrees C) acetate-utilizing granules from an upflow anaerobic sludge blanket reactor | Q39858354 | ||
Deeply sequenced metagenome and metatranscriptome of a biogas-producing microbial community from an agricultural production-scale biogas plant | Q40674458 | ||
CheckM: assessing the quality of microbial genomes recovered from isolates, single cells, and metagenomes | Q40936712 | ||
Complete genome sequence of the strain Defluviitoga tunisiensis L3, isolated from a thermophilic, production-scale biogas plant | Q41174425 | ||
Acetate oxidation is the dominant methanogenic pathway from acetate in the absence of Methanosaetaceae | Q41486476 | ||
Identification and assembly of genomes and genetic elements in complex metagenomic samples without using reference genomes | Q42207944 | ||
Taxonomic metagenome sequence assignment with structured output models | Q42790557 | ||
Complete genome sequence of the cellulolytic thermophile Ruminoclostridium cellulosi wild-type strain DG5 isolated from a thermophilic biogas plant | Q43022720 | ||
Characterization of microbial biofilms in a thermophilic biogas system by high-throughput metagenome sequencing. | Q43033645 | ||
A balanced microbiota efficiently produces methane in a novel high-rate horizontal anaerobic reactor for the treatment of swine wastewater | Q43338128 | ||
Performance and microbial community analysis of the anaerobic reactor with coke oven gas biomethanation and in situ biogas upgrading | Q43362445 | ||
The IWA Anaerobic Digestion Model No 1 (ADM1). | Q44109615 | ||
Anaerobic transformation of 2,4,6-TNT by bovine ruminal microbes | Q44747998 | ||
The metagenome of a biogas-producing microbial community of a production-scale biogas plant fermenter analysed by the 454-pyrosequencing technology | Q46504660 | ||
P921 | main subject | biogas | Q171076 |
metagenomics | Q903778 | ||
microbiome | Q1330402 | ||
P304 | page(s) | 26 | |
P577 | publication date | 2016-02-02 | |
P1433 | published in | Biotechnology for Biofuels | Q15754394 |
P1476 | title | Metagenomic analysis and functional characterization of the biogas microbiome using high throughput shotgun sequencing and a novel binning strategy | |
P478 | volume | 9 |
Q58803932 | A metagenomic analysis of the camel rumen's microbiome identifies the major microbes responsible for lignocellulose degradation and fermentation |
Q63352013 | A year of monitoring 20 mesophilic full-scale bioreactors reveals the existence of stable but different core microbiomes in bio-waste and wastewater anaerobic digestion systems |
Q47371611 | Anaerobic co-digestion of pig manure and food waste; effects on digestate biosafety, dewaterability, and microbial community dynamics. |
Q46306103 | Anaerobic granular sludge for simultaneous biomethanation of synthetic wastewater and CO with focus on the identification of CO-converting microorganisms |
Q47830995 | Application of next-generation sequencing methods for microbial monitoring of anaerobic digestion of lignocellulosic biomass. |
Q64974597 | Augmenting Biogas Process Modeling by Resolving Intracellular Metabolic Activity. |
Q46482811 | Biogas production from hydrothermal liquefaction wastewater (HTLWW): Focusing on the microbial communities as revealed by high-throughput sequencing of full-length 16S rRNA genes |
Q31146107 | Defluviitalea raffinosedens sp. nov., a thermophilic, anaerobic, saccharolytic bacterium isolated from an anaerobic batch digester treating animal manure and rice straw |
Q33823596 | Diversity of microbial carbohydrate-active enzymes in Danish anaerobic digesters fed with wastewater treatment sludge |
Q37050284 | Dynamic functional characterization and phylogenetic changes due to Long Chain Fatty Acids pulses in biogas reactors |
Q37568816 | Effect of humic acid on anaerobic digestion of cellulose and xylan in completely stirred tank reactors: inhibitory effect, mitigation of the inhibition and the dynamics of the microbial communities. |
Q90702360 | Effect of sulfate addition on carbon flow and microbial community composition during thermophilic digestion of cellulose |
Q92526947 | Effects of H2:CO2 ratio and H2 supply fluctuation on methane content and microbial community composition during in-situ biological biogas upgrading |
Q49498363 | Enhancing methane production from lignocellulosic biomass by combined steam-explosion pretreatment and bioaugmentation with cellulolytic bacterium Caldicellulosiruptor bescii |
Q98182362 | Fe3O4 accelerates tetracycline degradation during anaerobic digestion: Synergistic role of adsorption and microbial metabolism |
Q58714034 | Genetic repertoires of anaerobic microbiomes driving generation of biogas |
Q92027235 | Genome-Wide and Functional View of Proteolytic and Lipolytic Bacteria for Efficient Biogas Production through Enhanced Sewage Sludge Hydrolysis |
Q55397905 | Genome-centric metatranscriptomes and ecological roles of the active microbial populations during cellulosic biomass anaerobic digestion. |
Q44640473 | Genomics and prevalence of bacterial and archaeal isolates from biogas-producing microbiomes |
Q54962706 | Hydrogen-Fueled Microbial Pathways in Biogas Upgrading Systems Revealed by Genome-Centric Metagenomics. |
Q28595871 | Identification and genome reconstruction of abundant distinct taxa in microbiomes from one thermophilic and three mesophilic production-scale biogas plants |
Q38667914 | Inferring microbial interactions in thermophilic and mesophilic anaerobic digestion of hog waste |
Q98627341 | Intermittent aeration of landfill simulation bioreactors: Effects on emissions and microbial community |
Q37576003 | Lytic polysaccharide monooxygenases disrupt the cellulose fibers structure |
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Q55360985 | Metagenome Sequences of a Thermophilic Anaerobic Digester Adapted to a Low C/N Ratio, High-Ammonia Feedstock (Poultry Litter). |
Q55094507 | Metagenome, metatranscriptome, and metaproteome approaches unraveled compositions and functional relationships of microbial communities residing in biogas plants. |
Q57901068 | Metagenomic Binning Recovers a Transcriptionally Active Gammaproteobacterium Linking Methanotrophy to Partial Denitrification in an Anoxic Oxygen Minimum Zone |
Q37405865 | Metagenomic and metaproteomic analyses of a corn stover-adapted microbial consortium EMSD5 reveal its taxonomic and enzymatic basis for degrading lignocellulose |
Q52716017 | Metagenomic binning reveals the functional roles of core abundant microorganisms in twelve full-scale biogas plants. |
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Q64083960 | Metaproteome analysis reveals that syntrophy, competition, and phage-host interaction shape microbial communities in biogas plants |
Q55115605 | Methane-yielding microbial communities processing lactate-rich substrates: a piece of the anaerobic digestion puzzle. |
Q58111763 | Microbial activity response to hydrogen injection in thermophilic anaerobic digesters revealed by genome-centric metatranscriptomics |
Q36220376 | Microbial community changes in methanogenic granules during the transition from mesophilic to thermophilic conditions |
Q38946880 | Microbial diversity of a full-scale UASB reactor applied to poultry slaughterhouse wastewater treatment: integration of 16S rRNA gene amplicon and shotgun metagenomic sequencing. |
Q50288397 | Microbial effects of part-stream low-frequency ultrasonic pretreatment on sludge anaerobic digestion as revealed by high-throughput sequencing-based metagenomics and metatranscriptomics |
Q40464950 | Microbial population dynamics in urban organic waste anaerobic co-digestion with mixed sludge during a change in feedstock composition and different hydraulic retention times. |
Q89984702 | New insights from the biogas microbiome by comprehensive genome-resolved metagenomics of nearly 1600 species originating from multiple anaerobic digesters |
Q42267398 | Non-autotrophic methanogens dominate in anaerobic digesters. |
Q39206321 | Novel Syntrophic Populations Dominate an Ammonia-Tolerant Methanogenic Microbiome. |
Q61758990 | Novel ecological insights and functional roles during anaerobic digestion of saccharides unveiled by genome-centric metagenomics |
Q43364277 | Operation-driven heterogeneity and overlooked feed-associated populations in global anaerobic digester microbiome. |
Q50049751 | Performance and genome-centric metagenomics of thermophilic single and two-stage anaerobic digesters treating cheese wastes |
Q37146822 | Process parameters and changes in the microbial community patterns during the first 240 days of an agricultural energy crop digester |
Q55225995 | Proteiniphilum saccharofermentans str. M3/6T isolated from a laboratory biogas reactor is versatile in polysaccharide and oligopeptide utilization as deduced from genome-based metabolic reconstructions. |
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Q61759034 | Spatial Distribution and Diverse Metabolic Functions of Lignocellulose-Degrading Uncultured Bacteria as Revealed by Genome-Centric Metagenomics |
Q97067381 | Syntrophic acetate oxidation replaces acetoclastic methanogenesis during thermophilic digestion of biowaste |
Q46247902 | Targeted in situ metatranscriptomics for selected taxa from mesophilic and thermophilic biogas plants |
Q48130454 | Taxonomy of anaerobic digestion microbiome reveals biases associated with the applied high throughput sequencing strategies |
Q57492413 | The Planktonic Core Microbiome and Core Functions in the Cattle Rumen by Next Generation Sequencing |
Q38609424 | The impact of immigration on microbial community composition in full-scale anaerobic digesters |
Q27324451 | Whole-Metagenome-Sequencing-Based Community Profiles of Vitis vinifera L. cv. Corvina Berries Withered in Two Post-harvest Conditions. |
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