Modeling SAGE tag formation and its effects on data interpretation within a Bayesian framework

scientific article

Modeling SAGE tag formation and its effects on data interpretation within a Bayesian framework is …
instance of (P31):
scholarly articleQ13442814

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P8978DBLP publication IDjournals/bmcbi/GilchristQZ07
P6179Dimensions Publication ID1026347749
P356DOI10.1186/1471-2105-8-403
P932PMC publication ID2217564
P698PubMed publication ID17945026
P5875ResearchGate publication ID5900685

P2093author name stringMichael A Gilchrist
Hong Qin
Russell Zaretzki
P2860cites workPost-transcriptional expression regulation in the yeast Saccharomyces cerevisiae on a genomic scale.Q52966522
Genome-wide analysis of mRNA lengths in Saccharomyces cerevisiaeQ21194865
Bayesian model accounting for within-class biological variability in Serial Analysis of Gene Expression (SAGE).Q24792211
Clustering analysis of SAGE data using a Poisson approachQ24805291
Serial analysis of gene expressionQ27860777
Tag-based approaches for transcriptome research and genome annotationQ28258011
Characterization of the yeast transcriptomeQ28302110
The significance of digital gene expression profilesQ29614357
Saccharomyces Genome Database (SGD) provides tools to identify and analyze sequences from Saccharomyces cerevisiae and related sequences from other organismsQ29619138
Gene expression profiles in normal and cancer cellsQ29619943
A high-resolution map of transcription in the yeast genomeQ30014822
Detecting the impact of sequencing errors on SAGE data.Q30661944
Can transcriptome size be estimated from SAGE catalogs?Q30889243
Differential expression in SAGE: accounting for normal between-library variation.Q30975659
Modeling Sage data with a truncated gamma-Poisson modelQ31034707
Correction of sequence-based artifacts in serial analysis of gene expressionQ31044199
Statistical modeling of sequencing errors in SAGE librariesQ31096238
Bayesian shrinkage estimation of the relative abundance of mRNA transcripts using SAGE.Q33194608
General statistics of stochastic process of gene expression in eukaryotic cells.Q34615557
SAGE transcript profiles for p53-dependent growth regulationQ41092725
Using credibility intervals instead of hypothesis tests in SAGE analysisQ48567994
P275copyright licenseCreative Commons Attribution 2.0 GenericQ19125117
P6216copyright statuscopyrightedQ50423863
P304page(s)403
P577publication date2007-10-18
P1433published inBMC BioinformaticsQ4835939
P1476titleModeling SAGE tag formation and its effects on data interpretation within a Bayesian framework
P478volume8

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cites work (P2860)
Q30822033A Bayesian Semi-parametric Approach for the Differential Analysis of Sequence Counts Data.
Q33529302Bias correction and Bayesian analysis of aggregate counts in SAGE libraries
Q33372457Clustering-based approaches to SAGE data mining
Q39892179Quantification of the yeast transcriptome by single-molecule sequencing
Q26991596The analytical landscape of static and temporal dynamics in transcriptome data

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