Precise determination of RNA-protein contact sites in the 50 S ribosomal subunit of Escherichia coli

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Precise determination of RNA-protein contact sites in the 50 S ribosomal subunit of Escherichia coli is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.1042/BJ3340039
P932PMC publication ID1219658
P698PubMed publication ID9693099
P5875ResearchGate publication ID13592354

P2093author name stringGrelle G
Urlaub H
Neubauer H
Thiede B
Wittmann-Liebold B
P2860cites workFunctional implications of ribosomal protein L2 in protein biosynthesis as shown by in vivo replacement studiesQ24530749
Crystal structure of the ternary complex of Phe-tRNAPhe, EF-Tu, and a GTP analogQ27729310
The crystal structure of ribosomal protein L14 reveals an important organizational component of the translational apparatusQ27733357
Structural evidence for specific S8-RNA and S8-protein interactions within the 30S ribosomal subunit: ribosomal protein S8 from Bacillus stearothermophilus at 1.9 A resolutionQ27733411
Solution structure of the ribosomal RNA binding protein S15 from Thermus thermophilusQ27734306
The structure of ribosomal protein S7 at 1.9 A resolution reveals a beta-hairpin motif that binds double-stranded nucleic acidsQ27745763
Ribosomal protein S7: a new RNA-binding motif with structural similarities to a DNA architectural factorQ27745831
Conserved structures and diversity of functions of RNA-binding proteinsQ27861066
The Structure of Ribosomal RNA: A Three-Dimensional Jigsaw PuzzleQ33366858
Crystal structure of the RNA binding ribosomal protein L1 from Thermus thermophilusQ35846264
Computational methods for defining the allowed conformational space of 16S rRNA based on chemical footprinting data.Q36819943
Identification and sequence analysis of contact sites between ribosomal proteins and rRNA in Escherichia coli 30 S subunits by a new approach using matrix-assisted laser desorption/ionization-mass spectrometry combined with N-terminal microsequencinQ36863388
A new model for the three-dimensional folding of Escherichia coli 16 S ribosomal RNA. II. The RNA-protein interaction dataQ36880426
Protein-rRNA binding features and their structural and functional implications in ribosomes as determined by cross-linking studies.Q37622915
Selective isolation and detailed analysis of intra-RNA cross-links induced in the large ribosomal subunit of E. coli: a model for the tertiary structure of the tRNA binding domain in 23S RNAQ38339723
The binding site for ribosomal protein L2 within 23S ribosomal RNA of Escherichia coliQ38346180
Localization of a series of RNA-protein cross-link sites in the 23S and 5S ribosomal RNA fromEscherichia coli, induced by treatment of 50S subunits with three different bifunctional reagentsQ40526724
RNA-protein cross-linking in Escherichia coli 50S ribosomal subunits; determination of sites on 23S RNA that are cross-linked to proteins L2, L4, L24 and L27 by treatment with 2-iminothiolaneQ40536991
RNA recognition: a family matter?Q40910413
Structure and expression of ribosomal protein genes in Xenopus laevis.Q41043701
Ribosomal proteins and elongation factorsQ41071913
RNA-binding proteins as regulators of gene expression.Q41536276
Recognition of a transmembrane domain: another role for the ribosome?Q41537673
Ribosomes and translationQ41550248
RNA structure comes of age.Q41595272
A new model for the three-dimensional folding of Escherichia coli 16 S ribosomal RNA. I. Fitting the RNA to a 3D electron microscopic map at 20 A.Q41633625
The 70S Escherichia coli ribosome at 23 A resolution: fitting the ribosomal RNA.Q41634292
A model of protein synthesis based on cryo-electron microscopy of the E. coli ribosomeQ41634310
Extraribosomal functions of ribosomal proteins.Q52305448
A quantitative model of the Escherichia coli 16 S RNA in the 30 S ribosomal subunit.Q54630244
RNA-protein complexesQ71231806
Structure and function of ribosomal RNAQ71298385
Protein-RNA recognitionQ71778506
P407language of work or nameEnglishQ1860
P921main subjectEscherichia coliQ25419
P304page(s)39-42
P577publication date1998-08-01
P1433published inBiochemical JournalQ864221
P1476titlePrecise determination of RNA-protein contact sites in the 50 S ribosomal subunit of Escherichia coli
P478volume334 ( Pt 1)

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cites work (P2860)
Q84865221A role for the MS analysis of nucleic acids in the post-genomics age
Q30884932Analysis of RNA-protein cross-link sites by matrix-assisted laser desorption/ionization mass spectrometry and N-terminal microsequencing
Q36526216Crystal structure of ribosomal protein L27 from Thermus thermophilus HB8
Q27621598Crystal structure of ribosomal protein L4 shows RNA-binding sites for ribosome incorporation and feedback control of the S10 operon
Q33285574Developing limited proteolysis and mass spectrometry for the characterization of ribosome topography
Q36205577Elucidating the higher-order structure of biopolymers by structural probing and mass spectrometry: MS3D
Q38296458Establishment of Arabidopsis thaliana ribosomal protein RPL23A-1 as a functional homologue of Saccharomyces cerevisiae ribosomal protein L25.
Q42087569Functional conservation between structurally diverse ribosomal proteins from Drosophila melanogaster and Saccharomyces cerevisiae: fly L23a can substitute for yeast L25 in ribosome assembly and function
Q34364231Mining biochemical information: lessons taught by the ribosome
Q44567198On the structural and functional importance of the highly conserved Glu56 of Thermus thermophilus L4 ribosomal protein
Q33321822Protein folding by domain V of Escherichia coli 23S rRNA: specificity of RNA-protein interactions
Q35687704Selecting rRNA binding sites for the ribosomal proteins L4 and L6 from randomly fragmented rRNA: application of a method called SERF

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