A plausible model of phyllotaxis

scientific article

A plausible model of phyllotaxis is …
instance of (P31):
scholarly articleQ13442814

External links are
P819ADS bibcode2006PNAS..103.1301S
P356DOI10.1073/PNAS.0510457103
P932PMC publication ID1345713
P698PubMed publication ID16432192
P5875ResearchGate publication ID7341401

P50authorCris KuhlemeierQ55221887
Didier ReinhardtQ56679053
Soazig Guyomarc'hQ56697655
Therese MandelQ110577277
P2093author name stringRichard S Smith
Przemyslaw Prusinkiewicz
P2860cites workAuxin transport promotes Arabidopsis lateral root initiationQ28361772
Microsurgical and laser ablation analysis of leaf positioning and dorsoventral patterning in tomato.Q31131979
Auxin regulates the initiation and radial position of plant lateral organs.Q33334527
Auxin and phyllotaxis.Q33335605
The auxin influx carrier is essential for correct leaf positioningQ33337892
Cell cycling frequency and expression of the homeobox gene ATHB-8 during leaf vein development in ArabidopsisQ33337899
Regulation of phyllotaxis by polar auxin transportQ33339417
Genetic and chemical analyses of the action mechanisms of sirtinol in ArabidopsisQ33864497
Local, efflux-dependent auxin gradients as a common module for plant organ formation.Q34280509
Auxin: regulation, action, and interaction.Q34555744
AINTEGUMENTA, an APETALA2-like gene of Arabidopsis with pleiotropic roles in ovule development and floral organ growthQ38562781
Self-organization of the vascular system in plant leaves: inter-dependent dynamics of auxin flux and carrier proteinsQ40421926
Maintenance of embryonic auxin distribution for apical-basal patterning by PIN-FORMED-dependent auxin transport in Arabidopsis.Q42482004
Sites and homeostatic control of auxin biosynthesis in Arabidopsis during vegetative growth.Q43818380
Functional redundancy of PIN proteins is accompanied by auxin-dependent cross-regulation of PIN expression.Q52038205
Auxin signaling in Arabidopsis leaf vascular development.Q52107822
Requirement of the Auxin Polar Transport System in Early Stages of Arabidopsis Floral Bud Formation.Q52236253
Auxin inhibits endocytosis and promotes its own efflux from cellsQ57933141
Reviewing models of auxin canalization in the context of leaf vein pattern formation in ArabidopsisQ81502771
Diffusion mechanism for phyllotaxis: theoretical physico-chemical and computer studyQ83251253
Quantitative modeling of Arabidopsis developmentQ94460121
P433issue5
P407language of work or nameEnglishQ1860
P921main subjectphyllotaxisQ839659
P304page(s)1301-1306
P577publication date2006-01-23
P1433published inProceedings of the National Academy of Sciences of the United States of AmericaQ1146531
P1476titleA plausible model of phyllotaxis
P478volume103

Reverse relations

cites work (P2860)
Q92303654A Growth-Based Framework for Leaf Shape Development and Diversity
Q42576292A common developmental program can produce diverse leaf shapes
Q33359810A computational model of the effect of symplastic growth on cell mechanics in a linear leaf blade.
Q27323154A division in PIN-mediated auxin patterning during organ initiation in grasses
Q28647868A dynamical phyllotaxis model to determine floral organ number
Q38079557A mathematical basis for plant patterning derived from physico-chemical phenomena
Q28656002A model for an early role of auxin in Arabidopsis gynoecium morphogenesis
Q33352776A model for leaf initiation: determination of phyllotaxis by waves in the generative circle
Q50131127A phosphoinositide map at the shoot apical meristem in Arabidopsis thaliana.
Q42269727A plant cell division algorithm based on cell biomechanics and ellipse-fitting.
Q30496039A plausible mechanism for auxin patterning along the developing root.
Q33346230A quantitative and dynamic model for plant stem cell regulation
Q91188390A sense of place, many times over - pattern formation and evolution of repetitive morphological structures
Q46791987A sister of PIN1 gene in tomato (Solanum lycopersicum) defines leaf and flower organ initiation patterns by maintaining epidermal auxin flux
Q34080446A small-molecule screen identifies L-kynurenine as a competitive inhibitor of TAA1/TAR activity in ethylene-directed auxin biosynthesis and root growth in Arabidopsis
Q42416594A stochastic multicellular model identifies biological watermarks from disorders in self-organized patterns of phyllotaxis.
Q42152907A system for modelling cell-cell interactions during plant morphogenesis
Q39858260A systems biology approach to dissect the contribution of brassinosteroid and auxin hormones to vascular patterning in the shoot of Arabidopsis thaliana
Q33347300AINTEGUMENTA and AINTEGUMENTA-LIKE6 act redundantly to regulate Arabidopsis floral growth and patterning
Q34307487AUX/LAX family of auxin influx carriers-an overview
Q27322981Alignment between PIN1 polarity and microtubule orientation in the shoot apical meristem reveals a tight coupling between morphogenesis and auxin transport
Q33383203An auxin transport-based model of root branching in Arabidopsis thaliana
Q37500154Auxin Acts through MONOPTEROS to Regulate Plant Cell Polarity and Pattern Phyllotaxis
Q47614880Auxin Response Dynamics During Wild-Type and entire Flower Development in Tomato
Q56288307Auxin Signaling
Q29392280Auxin Transporters--Why So Many?
Q49385324Auxin and above-ground meristems
Q33355678Auxin and self-organization at the shoot apical meristem
Q33349047Auxin at the shoot apical meristem
Q34755390Auxin dynamics: the dazzling complexity of a small molecule's message.
Q33878763Auxin efflux by PIN-FORMED proteins is activated by two different protein kinases, D6 PROTEIN KINASE and PINOID
Q33357219Auxin gradients across wood-instructive or incidental?
Q33345702Auxin gradients are associated with polarity changes in trees
Q27311202Auxin influx carriers control vascular patterning and xylem differentiation in Arabidopsis thaliana
Q42042295Auxin influx carriers stabilize phyllotactic patterning
Q42414291Auxin influx importers modulate serration along the leaf margin
Q42023090Auxin influx inhibitors 1-NOA, 2-NOA, and CHPAA interfere with membrane dynamics in tobacco cells.
Q91176588Auxin regulation involved in gynoecium morphogenesis of papaya flowers
Q42223846Auxin transport at cellular level: new insights supported by mathematical modelling.
Q53520095Auxin transport is sufficient to generate a maximum and gradient guiding root growth.
Q47958154Auxin-Induced Modulation of ETTIN Activity Orchestrates Gene Expression in Arabidopsis.
Q42385352Auxin-driven patterning with unidirectional fluxes
Q33347136Auxin-induced WUS expression is essential for embryonic stem cell renewal during somatic embryogenesis in Arabidopsis
Q57176655Auxin-mediated regulation of vascular patterning in Arabidopsis thaliana leaves
Q26852934Auxology: when auxin meets plant evo-devo
Q28611213Biophysical optimality of the golden angle in phyllotaxis
Q37278881Brassinosteroid signaling and auxin transport are required to establish the periodic pattern of Arabidopsis shoot vascular bundles
Q33361153CLAUSA restricts tomato leaf morphogenesis and GOBLET expression
Q35105964Canalization of auxin flow by Aux/IAA-ARF-dependent feedback regulation of PIN polarity.
Q42476901Cell polarity in plants: Linking PIN polarity generation mechanisms to morphogenic auxin gradients
Q37534218Cell size and growth regulation in the Arabidopsis thaliana apical stem cell niche.
Q37593738Cell topology, geometry, and morphogenesis in proliferating epithelia
Q41671810Cell type boundaries organize plant development.
Q26823374Cell walls as a stage for intercellular communication regulating shoot meristem development
Q33365304Cell-size dependent progression of the cell cycle creates homeostasis and flexibility of plant cell size
Q33365511Comparative transcription analysis of different Antirrhinum phyllotaxy nodes identifies major signal networks involved in vegetative-reproductive transition
Q37516503Computational Modeling of Auxin: A Foundation for Plant Engineering
Q56950566Computational botany: advancing plant science through functional–structural plant modelling
Q33350720Computational morphodynamics of plants: integrating development over space and time.
Q33998661Computational morphodynamics: a modeling framework to understand plant growth
Q33346217Conditional repression of AUXIN BINDING PROTEIN1 reveals that it coordinates cell division and cell expansion during postembryonic shoot development in Arabidopsis and tobacco
Q33354151Conflict between Intrinsic Leaf Asymmetry and Phyllotaxis in the Resupinate Leaves of Alstroemeria psittacina.
Q37806865Context, Specificity, and Self-Organization in Auxin Response
Q33347950Control of bud activation by an auxin transport switch
Q37698260Control of leaf and vein development by auxin
Q37779618Control of tissue and organ growth in plants
Q42637796Cross-species functional diversity within the PIN auxin efflux protein family
Q58775186Curvature-driven spatial patterns in growing 3D domains: A mechanochemical model for phyllotaxis
Q92460209Cytokinin functions as an asymmetric and anti-gravitropic signal in lateral roots
Q33357355Cytokinin signalling inhibitory fields provide robustness to phyllotaxis
Q36837933Developmental mechanisms underlying variable, invariant and plastic phenotypes.
Q33346441Developmental patterning by mechanical signals in Arabidopsis
Q33362799Differential regulation of meristem size, morphology and organization by the ERECTA, CLAVATA and class III HD-ZIP pathways
Q48219515Discrete and continuous invariance in phyllotactic tilings
Q61813487Drawing a Line: Grasses and Boundaries
Q33345599Dual effects of miR156-targeted SPL genes and CYP78A5/KLUH on plastochron length and organ size in Arabidopsis thaliana
Q33356111ERECTA family genes regulate auxin transport in the shoot apical meristem and forming leaf primordia
Q33363757Ectopic KNOX Expression Affects Plant Development by Altering Tissue Cell Polarity and Identity
Q30497851Emergence of tissue polarization from synergy of intracellular and extracellular auxin signaling.
Q47430562Endomembrane trafficking protein SEC24A regulates cell size patterning in Arabidopsis.
Q46256173Evolution and ecology of plant architecture: integrating insights from the fossil record, extant morphology, developmental genetics and phylogenies.
Q33364470Exogenous Cellulase Switches Cell Interdigitation to Cell Elongation in an RIC1-dependent Manner in Arabidopsis thaliana Cotyledon Pavement Cells
Q36239188Experimental and Theoretical Methods to Approach the Study of Vascular Patterning in the Plant Shoot.
Q30000671Experimental data and computational modeling link auxin gradient and development in the Arabidopsis root
Q37887532Feedback models for polarized auxin transport: an emerging trend
Q33365096Flower development: from morphodynamics to morphomechanics.
Q41139328Flower orientation influences the consistency of bumblebee movement within inflorescences
Q41972533Fluctuations of the transcription factor ATML1 generate the pattern of giant cells in the Arabidopsis sepal.
Q27336302Flux-based transport enhancement as a plausible unifying mechanism for auxin transport in meristem development
Q33343634Following the initiation and development of individual leaf primordia at the level of the shoot apical meristem: the case of distichous phyllotaxis in Begonia
Q42389022Formation of polarity convergences underlying shoot outgrowths.
Q26781150From limbs to leaves: common themes in evolutionary diversification of organ form
Q33346156From signals to patterns: space, time, and mathematics in developmental biology
Q33361944Genetic control of morphometric diversity in the maize shoot apical meristem
Q39432175Geometrical study of phyllotactic patterns by Bernoulli spiral lattices.
Q61444959Global Topological Order Emerges through Local Mechanical Control of Cell Divisions in the Arabidopsis Shoot Apical Meristem
Q33349125Hide and seek: uncloaking the vegetative shoot apex of Arabidopsis thaliana
Q33346020Hormone mediated regulation of the shoot apical meristem
Q38875254Hormones in tomato leaf development
Q80078139How far can a molecule of weak acid travel in the apoplast or xylem?
Q33349240Imaging plant growth in 4D: robust tissue reconstruction and lineaging at cell resolution.
Q34794676Inherent randomness of cell division patterns
Q33346712Integration of transport-based models for phyllotaxis and midvein formation
Q33767750Investigation of triterpene synthesis and regulation in oats reveals a role for β-amyrin in determining root epidermal cell patterning
Q33350507Is cell polarity under mechanical control in plants?
Q34709889JAGGED controls Arabidopsis petal growth and shape by interacting with a divergent polarity field
Q38122754Juicy stories on female reproductive tissue development: coordinating the hormone flows.
Q33343747KANADI and class III HD-Zip gene families regulate embryo patterning and modulate auxin flow during embryogenesis in Arabidopsis
Q37578194Leaf Segmentation and Tracking in Arabidopsis thaliana Combined to an Organ-Scale Plant Model for Genotypic Differentiation
Q46602395Leaf asymmetry as a developmental constraint imposed by auxin-dependent phyllotactic patterning
Q33364220Left-right leaf asymmetry in decussate and distichous phyllotactic systems
Q33354956Local auxin biosynthesis regulation by PLETHORA transcription factors controls phyllotaxis in Arabidopsis
Q33360507Localized auxin peaks in concentration-based transport models of the shoot apical meristem
Q33357488MAB4-induced auxin sink generates local auxin gradients in Arabidopsis organ formation
Q92561936Mathematical model studies of the comprehensive generation of major and minor phyllotactic patterns in plants with a predominant focus on orixate phyllotaxis
Q33295481Measurement of diffusion within the cell wall in living roots of Arabidopsis thaliana
Q33356298Mechanical control of morphogenesis at the shoot apex
Q28658551Mechanical forces as information: an integrated approach to plant and animal development
Q28487929Mechano-chemical aspects of organ formation in Arabidopsis thaliana: the relationship between auxin and pectin
Q33359343Meristem identity and phyllotaxis in inflorescence development
Q33359686Meristem size contributes to the robustness of phyllotaxis in Arabidopsis
Q33342716Meristems in the movies: live imaging as a tool for decoding intercellular signaling in shoot apical meristems
Q30498240Model for the regulation of Arabidopsis thaliana leaf margin development.
Q33353664Modeling a cortical auxin maximum for nodulation: different signatures of potential strategies
Q33466744Modeling and inferring cleavage patterns in proliferating epithelia
Q33348676Modeling auxin-regulated development
Q38196089Modelling hormonal response and development
Q40442699Modelling the emergence of polarity patterns for the intercellular transport of auxin in plants
Q33345854Multiple MONOPTEROS-dependent pathways are involved in leaf initiation
Q51513934Multiscale modelling of auxin transport in the plant-root elongation zone.
Q59418237My favourite flowering image: a capitulum of Asteraceae
Q33357018N-MYC down-regulated-like proteins regulate meristem initiation by modulating auxin transport and MAX2 expression
Q37081533NPY genes and AGC kinases define two key steps in auxin-mediated organogenesis in Arabidopsis
Q27332097Noise and robustness in phyllotaxis
Q51317774Numerical bifurcation analysis of the pattern formation in a cell based auxin transport model.
Q58616027Of mice and plants; Comparative Developmental Systems Biology
Q43757386Oil collecting bees and Byrsonima cydoniifolia A. Juss. (Malpighiaceae) interactions: the prevalence of long-distance cross pollination driving reproductive success
Q33351493Organogenesis from stem cells in planta: multiple feedback loops integrating molecular and mechanical signals
Q37234801PIN polar targeting
Q51252602Pattern formation in auxin flux.
Q33344894Pattern selection in plants: coupling chemical dynamics to surface growth in three dimensions
Q47660045Phyllotactic regularity requires the Paf1 complex in Arabidopsis
Q33347670Phyllotaxis as an example of the symbiosis of mechanical forces and biochemical processes in living tissue
Q33363161Phyllotaxis: from patterns of organogenesis at the meristem to shoot architecture.
Q38213230Physical forces regulate plant development and morphogenesis
Q33353793Pin1-independent leaf initiation in Arabidopsis
Q45149090Pisum sativum wild-type and mutant stipules and those induced by an auxin transport inhibitor demonstrate the entire diversity of laminated stipules observed in angiosperms.
Q41424919Plant Science View on Biohybrid Development
Q37450755Plant hormones are versatile chemical regulators of plant growth.
Q28261024Plant intelligence: why, why not or where?
Q37839150Plant systems biology: network matters
Q28650600Plasma membrane-targeted PIN proteins drive shoot development in a moss
Q39930218Polar auxin transport and asymmetric auxin distribution
Q83308819Producing patterns in plants
Q33349859Putative dual pathway of auxin transport in organogenesis of Arabidopsis
Q26770032Quantifying morphogenesis in plants in 4D
Q33349290Quantitative predictions on auxin-induced polar distribution of PIN proteins during vein formation in leaves.
Q46307384Reaction-diffusion patterns in plant tip morphogenesis: bifurcations on spherical caps
Q55190537Relay synchronization in multiplex networks.
Q33354099Rice DECUSSATE controls phyllotaxy by affecting the cytokinin signaling pathway
Q83810908Rice PLASTOCHRON genes regulate leaf maturation downstream of the gibberellin signal transduction pathway
Q95832066Robust organ size requires robust timing of initiation orchestrated by focused auxin and cytokinin signalling
Q27332219Root system architecture from coupling cell shape to auxin transport
Q33348617SLOW MOTION is required for within-plant auxin homeostasis and normal timing of lateral organ initiation at the shoot meristem in Arabidopsis
Q46313641Seasonal Regulation of Petal Number
Q33360176Self-organization of plant vascular systems: claims and counter-claims about the flux-based auxin transport model
Q33349930Shaping the meristem by mechanical forces
Q33349581Shoot apical meristem form and function
Q33345561Signals derived from YABBY gene activities in organ primordia regulate growth and partitioning of Arabidopsis shoot apical meristems.
Q27311275Simulation of organ patterning on the floral meristem using a polar auxin transport model
Q52610208Spatial regularity control of phyllotaxis pattern generated by the mutual interaction between auxin and PIN1.
Q33351715Stem cell activation by light guides plant organogenesis
Q33342922Stem fasciated, a recessive mutation in sunflower (Helianthus annuus), alters plant morphology and auxin level
Q36798316Stem-cell niches: nursery rhymes across kingdoms
Q33546666Stochastic and deterministic multiscale models for systems biology: an auxin-transport case study
Q34148934Stochasticity in plant cellular growth and patterning
Q33346937Studies of aberrant phyllotaxy1 mutants of maize indicate complex interactions between auxin and cytokinin signaling in the shoot apical meristem
Q55399165Synthetic hormone-responsive transcription factors can monitor and re-program plant development.
Q64962886Systems Biology Approach Pinpoints Minimum Requirements for Auxin Distribution during Fruit Opening.
Q33354631Systems analysis of shoot apical meristem growth and development: integrating hormonal and mechanical signaling
Q38185104Systems biology approaches to understand the role of auxin in root growth and development
Q33348323Systems biology of organ initiation at the shoot apex
Q94603619Temporal integration of auxin information for the regulation of patterning
Q33358254The AHP6 cytokinin signaling inhibitor mediates an auxin-cytokinin crosstalk that regulates the timing of organ initiation at the shoot apical meristem.
Q92150377The Diverse Roles of Auxin in Regulating Leaf Development
Q33357709The ERECTA receptor kinase regulates Arabidopsis shoot apical meristem size, phyllotaxy and floral meristem identity
Q46139479The Maize PI/GLO Ortholog Zmm16/sterile tassel silky ear1 Interacts with the Zygomorphy and Sex Determination Pathways in Flower Development
Q33349885The Power of Auxin in Plants
Q33345674The Relationship between auxin transport and maize branching
Q35814215The Shape of an Auxin Pulse, and What It Tells Us about the Transport Mechanism
Q58608755The arrangement of lateral veins along the midvein of leaves is not related to leaf phyllotaxis
Q33351726The auxin signalling network translates dynamic input into robust patterning at the shoot apex
Q46938686The developmental trajectory of leaflet morphology in wild tomato species
Q33355238The flux-based PIN allocation mechanism can generate either canalyzed or diffuse distribution patterns depending on geometry and boundary conditions
Q34513872The interplay between inflorescence development and function as the crucible of architectural diversity
Q34076263The march of the PINs: developmental plasticity by dynamic polar targeting in plant cells
Q33348317The mechanics behind plant development
Q33361038The never-ending story: from pluripotency to plant developmental plasticity
Q46237177The origin and early evolution of vascular plant shoots and leaves.
Q46403389The plant perceptron connects environment to development
Q21092737The role of auxin transport in plant patterning mechanisms
Q33359878The yin-yang of hormones: cytokinin and auxin interactions in plant development
Q90026349Theoretical models for branch formation in plants
Q37627165Tissue remodelling through branching morphogenesis
Q64103494Toward a 3D model of phyllotaxis based on a biochemically plausible auxin-transport mechanism
Q92146696Turing-like mechanism in a stochastic reaction-diffusion model recreates three dimensional vascular patterning of plant stems
Q33343018Two-dimensional patterning by a trapping/depletion mechanism: the role of TTG1 and GL3 in Arabidopsis trichome formation.
Q47567406Two-stage patterning dynamics in conifer cotyledon whorl morphogenesis
Q33344184Ubiquitin lysine 63 chain forming ligases regulate apical dominance in Arabidopsis
Q36830681Unravelling developmental dynamics: transient intervention and live imaging in plants
Q43099338Vertex-element models for anisotropic growth of elongated plant organs
Q29994829Virtual Plant Tissue: Building Blocks for Next-Generation Plant Growth Simulation
Q33350262VirtualLeaf: an open-source framework for cell-based modeling of plant tissue growth and development.
Q33352139WOX4 imparts auxin responsiveness to cambium cells in Arabidopsis
Q48150055WRKY23 is a component of the transcriptional network mediating auxin feedback on PIN polarity.

Search more.