Micro-eukaryotic diversity of the human distal gut microbiota: qualitative assessment using culture-dependent and -independent analysis of faeces.

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Micro-eukaryotic diversity of the human distal gut microbiota: qualitative assessment using culture-dependent and -independent analysis of faeces. is …
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scholarly articleQ13442814

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P6179Dimensions Publication ID1041028603
P356DOI10.1038/ISMEJ.2008.76
P698PubMed publication ID18670396
P5875ResearchGate publication ID23140735

P50authorJulian R MarchesiQ61126705
P2093author name stringPauline D Scanlan
P2860cites workDiversity of the human intestinal microbial floraQ24544241
Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNAQ24569526
Symbiotic bacteria direct expression of an intestinal bactericidal lectinQ24644003
Basic local alignment search toolQ25938991
MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) Software Version 4.0Q26778434
Irritable bowel syndrome in patients with Blastocystis hominis infectionQ28141826
Yeast interactions and wine flavourQ28191300
Seasonal prevalence of intestinal parasites in the United States during 2000Q28201374
Ribodemes of Blastocystis hominis isolated in JapanQ28203753
PCR fingerprinting of Blastocystis isolated from symptomatic and asymptomatic human hostsQ28235679
A molecular view of microbial diversity and the biosphereQ28235782
Anti-Saccharomyces cerevisiae mannan antibodies (ASCA) of Crohn's patients crossreact with mannan from other yeast strains, and murine ASCA IgM can be experimentally induced with Candida albicansQ28236862
Human parasite finds taxonomic homeQ28276189
Terminology for Blastocystis subtypes--a consensusQ28284480
Blastocystis in humans and animals: new insights using modern methodologiesQ28295463
Prospects for inferring very large phylogenies by using the neighbor-joining methodQ29616217
Assessment of yeast diversity in a marine environment in the south of Portugal by microsatellite-primed PCR.Q31015993
Phylogenetic analysis of the human gut microbiota using 16S rDNA clone libraries and strictly anaerobic culture-based methodsQ31113328
Four new Candida cretensis strains isolated from Spanish fermented sausages (chorizo): taxonomic and phylogenetic implications.Q31145387
Bacterial and fungal microbiota in relation to probiotic therapy (VSL#3) in pouchitis.Q33231186
Eukaryotic diversity in historical soil samplesQ33253838
Eukaryotic diversity associated with carbonates and fluid-seawater interface in Lost City hydrothermal fieldQ33269171
Diversity of the human gastrointestinal tract microbiota revisited.Q33293596
Health inequities: lower socio-economic conditions and higher incidences of intestinal parasitesQ33307456
Microorganisms in food ecosystemsQ33733633
Benthic eukaryotic diversity in the Guaymas Basin hydrothermal vent environment.Q34065011
Abundant and diverse fungal microbiota in the murine intestineQ34315970
Irritable bowel syndrome: a review on the role of intestinal protozoa and the importance of their detection and diagnosis.Q34577390
DNA rehybridization during PCR: the 'Cot effect' and its consequencesQ34598793
The use of Trichuris suis and other helminth therapies to treat Crohn's diseaseQ36700626
Yeasts in foods and beverages: impact on product quality and safetyQ36726879
Metabolic diversity of the intestinal microbiota: implications for health and diseaseQ36740849
Waterborne transmission of protozoan parasites: a worldwide review of outbreaks and lessons learntQ36777615
Identifying microorganisms involved in specific pathogen suppression in soilQ36824068
Importance of microbial colonization of the gut in early life to the development of immunityQ36870846
The normal intestinal microbiota.Q36925502
Blastocystis elongation factor-1alpha: genomic organization, taxonomy and phylogenetic relationshipsQ38306560
Succession and regulation factors of small eukaryote community composition in a lacustrine ecosystem (Lake Pavin).Q41769864
Commercial ripening starter microorganisms inoculated into cheese milk do not successfully establish themselves in the resident microbial ripening consortia of a South german red smear cheese.Q41900758
Molecular and phylogenetic analysis of Blastocystis isolates from various hostsQ43217917
PCR-based identification of zoonotic isolates of Blastocystis from mammals and birdsQ43218005
Methane production and substrate degradation by rumen microbial communities containing single protozoal species in vitroQ46943509
Detecting Blastocystis using parasitologic and DNA-based methods: a comparative studyQ46969158
The Number of Evolutionary Steps on Random and Minimum Length Trees for Random Evolutionary DataQ56083581
Function of yeast species and strains in wine flavourQ57003170
Genetic variability of Blastocystis hominis isolates in ChinaQ57937543
Sequence heterogeneity of the small subunit ribosomal RNA genes among blastocystis isolatesQ73071414
Analysis of the dynamics of fungal communities in soil via fungal-specific PCR of soil DNA followed by denaturing gradient gel electrophoresisQ73308492
Epidemiologic survey of Blastocystis hominis infection in JapanQ73353027
Diversity of commensal yeasts within and among healthy hostsQ74253054
Genetic relatedness of oral yeasts within and between patients with marginal periodontitis and subjects with oral healthQ81515120
P433issue12
P921main subjectfecesQ496
P304page(s)1183-1193
P577publication date2008-07-31
P1433published inThe ISME JournalQ7741240
P1476titleMicro-eukaryotic diversity of the human distal gut microbiota: qualitative assessment using culture-dependent and -independent analysis of faeces
P478volume2

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cites work (P2860)
Q46270201"Omic" investigations of protozoa and worms for a deeper understanding of the human gut "parasitome".
Q37641496A novel renal epithelial cell in vitro assay to assess Candida albicans virulence
Q40779753A retrospective metagenomics approach to studying Blastocystis
Q33741719A tool kit for quantifying eukaryotic rRNA gene sequences from human microbiome samples
Q36045875Accounting for reciprocal host-microbiome interactions in experimental science
Q28831500Age and Gender Affect the Composition of Fungal Population of the Human Gastrointestinal Tract
Q37139967Altered gut microbiota in Rett syndrome
Q96229784An anticonvulsive drug, valproic acid (valproate), has effects on the biosynthesis of fatty acids and polyketides in microorganisms
Q35201849An integrated catalog of reference genes in the human gut microbiome
Q38985902An introduction to microbiome analysis for human biology applications
Q36105508Antibiotics as deep modulators of gut microbiota: between good and evil.
Q40106442Arsenite response in Coccomyxa sp. Carn explored by transcriptomic and non-targeted metabolomic approaches
Q36049714Bacillus clausii and gut homeostasis: state of the art and future perspectives.
Q28741795Bacterial-fungal interactions: hyphens between agricultural, clinical, environmental, and food microbiologists
Q79562047Biodiversity of protists and nematodes in the wild nonhuman primate gut
Q91809763Blastocystis Colonization Is Associated with Increased Diversity and Altered Gut Bacterial Communities in Healthy Malian Children
Q26775144Blastocystis in Health and Disease: Are We Moving from a Clinical to a Public Health Perspective?
Q38130267Blastocystis: Genetic diversity and molecular methods for diagnosis and epidemiology
Q42869350Candida albicans and Enterococcus faecalis in the gut: synergy in commensalism?
Q34492985Candida albicans commensalism in the gastrointestinal tract
Q41738576Changes in bacterial and eukaryotic communities during sewage decomposition in Mississippi river water
Q55395106Characteristics of the bacterial microbiome in association with common intestinal parasites in irritable bowel syndrome.
Q33621839Colonization and Succession within the Human Gut Microbiome by Archaea, Bacteria, and Microeukaryotes during the First Year of Life
Q36870790Colonization with the enteric protozoa Blastocystis is associated with increased diversity of human gut bacterial microbiota
Q58802527Combined bacterial and fungal intestinal microbiota analyses: Impact of storage conditions and DNA extraction protocols
Q38128618Commensal Clostridia: leading players in the maintenance of gut homeostasis.
Q40488554Commercial strain-derived clinical Saccharomyces cerevisiae can evolve new phenotypes without higher pathogenicity.
Q33776527Communities of microbial eukaryotes in the mammalian gut within the context of environmental eukaryotic diversity
Q35113366Complementary amplicon-based genomic approaches for the study of fungal communities in humans
Q90474825Contrasting Strategies: Human Eukaryotic Versus Bacterial Microbiome Research
Q99572092Contrasting microbiota profiles observed in children carrying either Blastocystis spp. or the commensal amoebas Entamoeba coli or Endolimax nana
Q33694098Correlation between gastrointestinal fungi and varying degrees of chronic hepatitis B virus infection
Q37970612Culture-independent methods for studying environmental microorganisms: methods, application, and perspective.
Q92859570Current insights into fungal species diversity and perspective on naming the environmental DNA sequences of fungi
Q93088868DNA extraction and amplicon production strategies deeply inf luence the outcome of gut mycobiome studies
Q41690473Description of the interaction between Candida albicans and macrophages by mixed and quantitative proteome analysis without isolation.
Q39021798Development and Application of a Blastocystis Subtype-Specific PCR Assay Reveals that Mixed-Subtype Infections Are Common in a Healthy Human Population
Q35547552Dysbiosis of fungal microbiota in the intestinal mucosa of patients with colorectal adenomas
Q33762994Dysbiosis of gut fungal microbiota is associated with mucosal inflammation in Crohn's disease
Q93347337Enteric fungal microbiota dysbiosis and ecological alterations in colorectal cancer
Q33998547Eu-Detect: an algorithm for detecting eukaryotic sequences in metagenomic data sets
Q30850569Eukaryote culturomics of the gut reveals new species
Q49479077Eukaryotes in the gut microbiota in myalgic encephalomyelitis/chronic fatigue syndrome
Q38031307Feline gastrointestinal microbiota
Q90574560Food Components and Dietary Habits: Keys for a Healthy Gut Microbiota Composition
Q38692272Forgotten fungi-the gut mycobiome in human health and disease
Q58571195Functional eubacteria species along with trans-domain gut inhabitants favour dysgenic diversity in oxalate stone disease
Q91711933Fungal Dysbiosis and Intestinal Inflammation in Children With Beta-Cell Autoimmunity
Q46267304Fungi in Gastrointestinal Tracts of Human and Mice: from Community to Functions
Q39295896Fungi in the healthy human gastrointestinal tract
Q39661448Gene-centric metagenomics analysis of feline intestinal microbiome using 454 junior pyrosequencing
Q58607978Gut Microbial and Metabolic Responses to Salmonella enterica Serovar Typhimurium and Candida albicans
Q38690823Gut Microbiota in Health, Diverticular Disease, Irritable Bowel Syndrome, and Inflammatory Bowel Diseases: Time for Microbial Marker of Gastrointestinal Disorders?
Q47267724Gut flora may offer new therapeutic targets for the traditional Chinese medicine enteric dialysis
Q35534964Gut fungal microbiota: the Yin and Yang of inflammatory bowel disease
Q34612756Gut microbiota patterns associated with colonization of different Clostridium difficile ribotypes
Q37493621Gut microeukaryotes during anorexia nervosa: a case report
Q99622569Gut mycobiome and its interaction with diet, gut bacteria and alzheimer's disease markers in subjects with mild cognitive impairment: A pilot study
Q35659934Hosting infection: experimental models to assay Candida virulence
Q34015203Human distal gut microbiome.
Q27020975Human gut microbiota: repertoire and variations
Q92767858HumanMycobiomeScan: a new bioinformatics tool for the characterization of the fungal fraction in metagenomic samples
Q35746147Hypoxia and Temperature Regulated Morphogenesis in Candida albicans
Q38997847Impact of HIF-1α and hypoxia on fungal growth characteristics and fungal immunity.
Q41977914In situ proteo-metabolomics reveals metabolite secretion by the acid mine drainage bio-indicator, Euglena mutabilis
Q38067461Intestinal colonization resistance
Q24628739Intestinal microbiota in human health and disease: the impact of probiotics
Q90003029Isotopic and genetic methods reveal the role of the gut microbiome in mammalian host essential amino acid metabolism
Q31151211Kingdom-agnostic metagenomics and the importance of complete characterization of enteric microbial communities
Q38610350Large-scale comparative metagenomics of Blastocystis, a common member of the human gut microbiome
Q47702078Metabarcoding analysis of eukaryotic microbiota in the gut of HIV-infected patients
Q30389283Metagenomic analysis of the Rhinopithecus bieti fecal microbiome reveals a broad diversity of bacterial and glycoside hydrolase profiles related to lignocellulose degradation
Q28486181Metagenomic analysis of the pygmy loris fecal microbiome reveals unique functional capacity related to metabolism of aromatic compounds
Q51146451Microbial Eukaryotes: a Missing Link in Gut Microbiome Studies.
Q35203037Microbial communities associated with healthy and White syndrome-affected Echinopora lamellosa in aquaria and experimental treatment with the antibiotic ampicillin
Q27302342Microbial diversity and evidence of novel homoacetogens in the gut of both geriatric and adult giant pandas (Ailuropoda melanoleuca)
Q35103951Microbial eukaryotes in the human microbiome: ecology, evolution, and future directions
Q93138379Microbiome and type 1 diabetes
Q34589689Microbiota alterations in acute and chronic gastrointestinal inflammation of cats and dogs
Q34342492Molecular detection of eukaryotes in a single human stool sample from Senegal
Q41099055Molecular epidemiology and genetic diversity of Blastocystis infection in humans in Italy.
Q34267353Molecular typing of fecal eukaryotic microbiota of human infants and their respective mothers.
Q34530489Mucins suppress virulence traits of Candida albicans
Q93164681Mycobiome in the Gut: A Multiperspective Review
Q34274361Mycobiome of the bat white nose syndrome affected caves and mines reveals diversity of fungi and local adaptation by the fungal pathogen Pseudogymnoascus (Geomyces) destructans
Q37658313New evidences on the altered gut microbiota in autism spectrum disorders
Q34497633Obesity changes the human gut mycobiome
Q34200820Pathogenic eukaryotes in gut microbiota of western lowland gorillas as revealed by molecular survey
Q33449095Patterns and scales in gastrointestinal microbial ecology
Q41760266Phenotypic variation in Blastocystis sp. ST3
Q35018772Phylogenetic and gene-centric metagenomics of the canine intestinal microbiome reveals similarities with humans and mice
Q34649211Plant and fungal diversity in gut microbiota as revealed by molecular and culture investigations
Q58045717Population-level analysis ofBlastocystissubtype prevalence and variation in the human gut microbiota
Q34124324Prokaryotic and eukaryotic diversity of the human gut.
Q37122143Recent advances and remaining gaps in our knowledge of associations between gut microbiota and human health
Q38598714Repertory of eukaryotes (eukaryome) in the human gastrointestinal tract: taxonomy and detection methods
Q28655590Replenishing our defensive microbes
Q35278095Richness and diversity of mammalian fungal communities shape innate and adaptive immunity in health and disease.
Q41111209Ruminococcal cellulosome systems from rumen to human.
Q35869065Sequence-based methods for detecting and evaluating the human gut mycobiome
Q33730174Spatial organization of intestinal microbiota in the mouse ascending colon
Q34507718Stability of a biogas-producing bacterial, archaeal and fungal community degrading food residues
Q37092848Striking a balance: fungal commensalism versus pathogenesis
Q44678500Subtype analysis of Blastocystis isolates in Swedish patients
Q35078381Subtype distribution of Blastocystis isolates in Sebha, Libya
Q38639804The Fungal Frontier: A Comparative Analysis of Methods Used in the Study of the Human Gut Mycobiome.
Q36271354The Fungal Mycobiome and Its Interaction with Gut Bacteria in the Host.
Q34553267The Host Microbiome Regulates and Maintains Human Health: A Primer and Perspective for Non-Microbiologists
Q35721841The Microbiome: The Trillions of Microorganisms That Maintain Health and Cause Disease in Humans and Companion Animals
Q34448291The cross-talk between opportunistic fungi and the mammalian host via microbiota's metabolism
Q36068801The distribution of Blastocystis subtypes in isolates from Qatar
Q34041082The first 1000 cultured species of the human gastrointestinal microbiota.
Q46253527The gut mycobiome of the Human Microbiome Project healthy cohort.
Q92063098The gut mycobiota: insights into analysis, environmental interactions and role in gastrointestinal diseases
Q64903090The impact of intestinal microbiota on bio-medical research: definitions, techniques and physiology of a "new frontier".
Q29617446The impact of the gut microbiota on human health: an integrative view
Q26745700The intestinal microbiome, barrier function, and immune system in inflammatory bowel disease: a tripartite pathophysiological circuit with implications for new therapeutic directions
Q35215942The microbial eukaryote Blastocystis is a prevalent and diverse member of the healthy human gut microbiota.
Q37634456The mycobiome of the human urinary tract: potential roles for fungi in urology
Q90159677The mycobiota of the human body: a spark can start a prairie fire
Q35096262The mycobiota: interactions between commensal fungi and the host immune system.
Q36994006The role of gut microbiota on insulin resistance
Q33761506The yin and yang of yeast: biodiversity research and systems biology as complementary forces driving innovation in biotechnology.
Q37478693Tools for stools: the challenge of assessing human intestinal microbiota using molecular diagnostics
Q27021955Use of the Microbiome in the Practice of Epidemiology: A Primer on -Omic Technologies
Q34585227Waiting for the human intestinal Eukaryotome
Q34376721Yeast communities of diverse Drosophila species: comparison of two symbiont groups in the same hosts
Q33590266Yeast modulation of human dendritic cell cytokine secretion: an in vitro study

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