Extraction and comparison of gene expression patterns from 2D RNA in situ hybridization images

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Extraction and comparison of gene expression patterns from 2D RNA in situ hybridization images is …
instance of (P31):
scholarly articleQ13442814

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P8978DBLP publication IDjournals/bioinformatics/MaceVZFO10
P356DOI10.1093/BIOINFORMATICS/BTP658
P932PMC publication ID3140183
P698PubMed publication ID19942587
P5875ResearchGate publication ID40035741

P50authorUwe OhlerQ58219910
Nicole VarnadoQ62596873
P2093author name stringWeiping Zhang
Daniel L Mace
Erwin Frise
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A high-throughput method for quantifying gene expression data from early Drosophila embryosQ30987346
Semi-supervised learning for the identification of syn-expressed genes from fused microarray and in situ image dataQ31146469
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Automatic recognition and annotation of gene expression patterns of fly embryosQ38516987
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Mutually repressive interactions between the gap genes giant and Krüppel define middle body regions of the Drosophila embryo.Q52446991
The orthodenticle gene is regulated by bicoid and torso and specifies Drosophila head development.Q52447829
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Image registration methods: a surveyQ57532919
P433issue6
P407language of work or nameEnglishQ1860
P1104number of pages9
P304page(s)761-769
P577publication date2009-11-26
P1433published inBioinformaticsQ4914910
P1476titleExtraction and comparison of gene expression patterns from 2D RNA in situ hybridization images
P478volume26

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cites work (P2860)
Q47130289A geometric method for contour extraction of Drosophila embryos
Q40789186A high-fidelity cell lineage tracing method for obtaining systematic spatiotemporal gene expression patterns in Caenorhabditis elegans
Q41905976A methodology to infer gene networks from spatial patterns of expression--an application to fluorescence in situ hybridization images
Q58054758Analyzing Gene Expression Imaging Data in Developmental Biology
Q36960760Automated annotation of gene expression image sequences via non-parametric factor analysis and conditional random fields
Q33981233Automatic annotation of spatial expression patterns via sparse Bayesian factor models
Q38503216Automatically identifying and annotating mouse embryo gene expression patterns
Q38204607Bioimage Informatics in the context of Drosophila research
Q30550012GINI: from ISH images to gene interaction networks
Q31145020Image-level and group-level models for Drosophila gene expression pattern annotation
Q34278967Learning sparse representations for fruit-fly gene expression pattern image annotation and retrieval
Q21563481Localizing genes to cerebellar layers by classifying ISH images
Q34431457Medium-throughput processing of whole mount in situ hybridisation experiments into gene expression domains
Q56888177New methods for computational decomposition of whole-mount in situ images enable effective curation of a large, highly redundant collection of Xenopus images
Q35987459Stability-driven nonnegative matrix factorization to interpret spatial gene expression and build local gene networks

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