Application of gene network analysis techniques identifies AXIN1/PDIA2 and endoglin haplotypes associated with bicuspid aortic valve

scientific article

Application of gene network analysis techniques identifies AXIN1/PDIA2 and endoglin haplotypes associated with bicuspid aortic valve is …
instance of (P31):
scholarly articleQ13442814

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P819ADS bibcode2010PLoSO...5.8830W
P356DOI10.1371/JOURNAL.PONE.0008830
P932PMC publication ID2809109
P698PubMed publication ID20098615
P5875ResearchGate publication ID41123996

P50authorLakshmanan K IyerQ59149689
Eric C WootenQ59193990
Gordon S. HugginsQ114427846
P2093author name stringDavid E Housman
Maria Claudia Montefusco
Navin K Kapur
Michael E Mendelsohn
Douglas D Payne
Alyson Kelley Hedgepeth
P2860cites workINK4/ARF transcript expression is associated with chromosome 9p21 variants linked to atherosclerosisQ21562488
Are rare variants responsible for susceptibility to complex diseases?Q22337172
Mutations in NOTCH1 cause aortic valve diseaseQ24307999
Novel NOTCH1 mutations in patients with bicuspid aortic valve disease and thoracic aortic aneurysmsQ24323103
Cytoscape: a software environment for integrated models of biomolecular interaction networksQ24515682
A second generation human haplotype map of over 3.1 million SNPsQ24651939
The links between axin and carcinogenesisQ24672469
STRING 7--recent developments in the integration and prediction of protein interactionsQ24675384
PLINK: a tool set for whole-genome association and population-based linkage analysesQ24677407
Screening large-scale association study data: exploiting interactions using random forestsQ24809535
Linear models and empirical bayes methods for assessing differential expression in microarray experimentsQ27860758
Fate of the mammalian cardiac neural crestQ28139176
Defective angiogenesis in mice lacking endoglinQ28144833
Efficiency and power in genetic association studiesQ28278645
Defective ALK5 signaling in the neural crest leads to increased postmigratory neural crest cell apoptosis and severe outflow tract defectsQ28506220
Endoglin is required for myogenic differentiation potential of neural crest stem cellsQ28510584
Genetic Power Calculator: design of linkage and association genetic mapping studies of complex traitsQ29614876
Complement factor H polymorphism and age-related macular degenerationQ29614931
Endoglin (CD105) expression in the human heart throughout gestation: an immunohistochemical study.Q51944540
Clinical and pathophysiological implications of a bicuspid aortic valve.Q53783947
Familial thoracic aortic dilation and bicommissural aortic valve: A prospective analysis of natural history and inheritanceQ57150549
Novel missense mutations (p.T596M and p.P1797H) in NOTCH1 in patients with bicuspid aortic valveQ57315168
Identifying SNPs predictive of phenotype using random forestsQ57363161
Evidence in favor of linkage to human chromosomal regions 18q, 5q and 13q for bicuspid aortic valve and associated cardiovascular malformationsQ60696745
Distribution of endoglin in early human development reveals high levels on endocardial cushion tissue mesenchyme during valve formationQ74482103
Elevated expressions of osteopontin and tenascin C in ascending aortic aneurysms are associated with trileaflet aortic valves as compared with bicuspid aortic valvesQ80335640
Evidence of genetic locus heterogeneity for familial bicuspid aortic valveQ80837194
Inference of population structure using multilocus genotype data: dominant markers and null allelesQ29615942
ENDEAVOUR update: a web resource for gene prioritization in multiple speciesQ30482616
Gene prioritization through genomic data fusionQ33242612
Gene expression signature in peripheral blood detects thoracic aortic aneurysmQ33302909
Loss of Notch signalling induced by Dll4 causes arterial calibre reduction by increasing endothelial cell response to angiogenic stimuliQ33393502
Coding-sequence determinants of gene expression in Escherichia coliQ33428917
How many genetic variants remain to be discovered?Q33517108
On safari to Random Jungle: a fast implementation of Random Forests for high-dimensional dataQ33588377
Heart valve development: endothelial cell signaling and differentiationQ33607338
Prioritized subset analysis: improving power in genome-wide association studiesQ33805649
Bicuspid aortic valve is heritableQ34331122
Alleles in the HtrA serine peptidase 1 gene alter the risk of neovascular age-related macular degenerationQ34565579
Notch signaling in cardiac developmentQ34780720
CANDID: a flexible method for prioritizing candidate genes for complex human traits.Q35571604
FitSNPs: highly differentially expressed genes are more likely to have variants associated with diseaseQ37105918
Notch signaling in cardiac development and disease.Q37382226
Aortopathy is prevalent in relatives of bicuspid aortic valve patientsQ37387539
Surgical pathology of aortic valve disease. A study based on 602 specimensQ40767031
The neural crest as a possible pathogenetic factor in coarctation of the aorta and bicuspid aortic valveQ43457386
The Wnt/beta-catenin pathway regulates cardiac valve formationQ47073676
P275copyright licenseCreative Commons Attribution 4.0 InternationalQ20007257
P6216copyright statuscopyrightedQ50423863
P4510describes a project that usesCytoscapeQ3699942
limmaQ112236343
P433issue1
P407language of work or nameEnglishQ1860
P921main subjectaortaQ101004
P304page(s)e8830
P577publication date2010-01-21
P1433published inPLOS OneQ564954
P1476titleApplication of gene network analysis techniques identifies AXIN1/PDIA2 and endoglin haplotypes associated with bicuspid aortic valve
P478volume5

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cites work (P2860)
Q33733612A machine learning pipeline for quantitative phenotype prediction from genotype data
Q40074474Aneurysm Development in Patients With Bicuspid Aortic Valve (BAV): Possible Connection to Repair Deficiency?
Q37958949Angiogenesis regulation by TGFβ signalling: clues from an inherited vascular disease
Q54186984Association between polymorphisms in AXIN1 gene and atrial septal defect.
Q34621493Augmentation index and aortic stiffness in bicuspid aortic valve patients with non-dilated proximal aortas
Q33998688Combining genome-wide association mapping and transcriptional networks to identify novel genes controlling glucosinolates in Arabidopsis thaliana
Q46244905Conserved Gene Microsynteny Unveils Functional Interaction Between Protein Disulfide Isomerase and Rho Guanine-Dissociation Inhibitor Families
Q36825271Endoglin: a critical mediator of cardiovascular health
Q52718355Enlightening the Association between Bicuspid Aortic Valve and Aortopathy.
Q41537361Genetic Bases of Bicuspid Aortic Valve: The Contribution of Traditional and High-Throughput Sequencing Approaches on Research and Diagnosis
Q36339532Genetic abnormalities in bicuspid aortic valve root phenotype: preliminary results†.
Q26862793Genetics of congenital heart disease: the glass half empty
Q36789447Identification of two novel mutations of the HOMEZ gene in Chinese patients with isolated ventricular septal defect
Q38131392Intervention and management of congenital left heart obstructive lesions
Q37782239Left outflow tract anomalies in children
Q33888869Mind the dbGAP: the application of data mining to identify biological mechanisms
Q26744777Multivariate Methods for Genetic Variants Selection and Risk Prediction in Cardiovascular Diseases
Q36178682Partitioning the heart: mechanisms of cardiac septation and valve development
Q42070480Pathogenic Mechanisms of Bicuspid Aortic Valve Aortopathy
Q36011049Pathophysiological implications of different bicuspid aortic valve configurations
Q33762797Protein-altering and regulatory genetic variants near GATA4 implicated in bicuspid aortic valve
Q36203499Risk estimation and risk prediction using machine-learning methods.
Q87681974TGF-β Signaling in Control of Cardiovascular Function
Q47156238Thoracic Aortic Aneurysm Development in Patients with Bicuspid Aortic Valve: What Is the Role of Endothelial Cells?
Q35876843Unraveling divergent gene expression profiles in bicuspid and tricuspid aortic valve patients with thoracic aortic dilatation: the ASAP study