Prediction of potential cancer-risk regions based on transcriptome data: towards a comprehensive view

scientific article

Prediction of potential cancer-risk regions based on transcriptome data: towards a comprehensive view is …
instance of (P31):
scholarly articleQ13442814

External links are
P819ADS bibcode2014PLoSO...996320A
P356DOI10.1371/JOURNAL.PONE.0096320
P8608Fatcat IDrelease_etedga4z45fchi2gckliqtmlmy
P932PMC publication ID4010480
P698PubMed publication ID24796549
P5875ResearchGate publication ID262073252

P50authorEsmaeil EbrahimieQ56809825
Arghavan AlisoltaniQ41500057
P2093author name stringMahdi Ebrahimi
Hossein Fallahi
Mansour Ebrahimi
P2860cites workGenome-wide association study of 14,000 cases of seven common diseases and 3,000 shared controlsQ24550675
Systematic and integrative analysis of large gene lists using DAVID bioinformatics resourcesQ27860739
Genome-wide association study identifies five loci associated with susceptibility to pancreatic cancer in Chinese populationsQ28943254
Genome-wide association analysis identifies new lung cancer susceptibility loci in never-smoking women in AsiaQ28943345
Genome-wide association study identifies susceptibility loci for polycystic ovary syndrome on chromosome 2p16.3, 2p21 and 9q33.3Q28943454
A genome-wide association study identifies susceptibility loci for ovarian cancer at 2q31 and 8q24.Q29417084
Common variants at 19p13 are associated with susceptibility to ovarian cancerQ29417145
Integration of DNA copy number alterations and transcriptional expression analysis in human gastric cancer.Q31059013
Protein interaction network of Arabidopsis thaliana female gametophyte development identifies novel proteins and relationsQ31108958
Frequency, prognostic impact, and subtype association of 8p12, 8q24, 11q13, 12p13, 17q12, and 20q13 amplifications in breast cancersQ33260375
Simultaneous analysis of all SNPs in genome-wide and re-sequencing association studiesQ33354962
Discovery of EST-SSRs in lung cancer: tagged ESTs with SSRs lead to differential amino acid and protein expression patterns in cancerous tissuesQ34071811
RNA helicase DDX5 regulates microRNA expression and contributes to cytoskeletal reorganization in basal breast cancer cellsQ34075234
Perturbation of 14q32 miRNAs-cMYC gene network in osteosarcomaQ34228576
Genome-wide linkage scan for prostate cancer susceptibility in Finland: evidence for a novel locus on 2q37.3 and confirmation of signal on 17q21-q22.Q35109839
NOTCH1 mutations in CLL associated with trisomy 12.Q35669190
Assessment of palindromes as platforms for DNA amplification in breast cancerQ35694379
MicroRNA expression profiles in serous ovarian carcinoma.Q53321694
Common genetic variants in the microRNA biogenesis pathway are associated with malignant peripheral nerve sheath tumor risk in a Chinese populationQ56525455
Investigation of the colorectal cancer susceptibility region on chromosome 8q24.21 in a large German case-control sampleQ57569118
Distinct regions of allelic loss on chromosome 4 in human primary bladder carcinomaQ71805101
Involvement of glyceraldehyde-3-phosphate dehydrogenase (GAPDH) and p53 in neuronal apoptosis: evidence that GAPDH is upregulated by p53Q73107353
Amplification of multiple regions of chromosome 12, including 12q13-15, in chronic lymphocytic leukaemiaQ73338520
Pathway studio—the analysis and navigation of molecular networksQ79241603
Synonymous polymorphisms at splicing regulatory sites are associated with CpGs in neurodegenerative disease-related genesQ82527147
Duplication 12p and Pallister-Killian syndrome: a case report and review of the literature toward defining a Pallister-Killian syndrome minimal critical regionQ85497839
Consistent copy number gain in chromosome 12 in primary diffuse large cell lymphomas of the stomachQ35764165
Principles for the post-GWAS functional characterization of cancer risk lociQ35887461
DDX5 regulates DNA replication and is required for cell proliferation in a subset of breast cancer cellsQ36230183
Mapping the regulatory sequences controlling 93 breast cancer-associated miRNA genes leads to the identification of two functional promoters of the Hsa-mir-200b cluster, methylation of which is associated with metastasis or hormone receptor status iQ36250545
A study based on whole-genome sequencing yields a rare variant at 8q24 associated with prostate cancerQ36582798
MicroRNA-30c inhibits human breast tumour chemotherapy resistance by regulating TWF1 and IL-11.Q37044582
Genome-wide association scan identifies a colorectal cancer susceptibility locus on 11q23 and replicates risk loci at 8q24 and 18q21.Q37422744
MicroRNA in prostate, bladder, and kidney cancer: a systematic review.Q37836137
Clinical applications for microRNAs in cancerQ38065062
Association of the 15q25 and 5p15 lung cancer susceptibility regions with gene expression in lung tumor tissueQ38325774
Chromosome 14q loss defines a molecular subtype of clear-cell renal cell carcinoma associated with poor prognosisQ38409478
Predicting distinct organization of transcription factor binding sites on the promoter regions: a new genome-based approach to expand human embryonic stem cell regulatory network.Q38485687
Combined gene expression and proteomic analysis of EGF induced apoptosis in A431 cells suggests multiple pathways trigger apoptosis.Q39119280
Krüppel-like factor 4 (KLF4) suppresses neuroblastoma cell growth and determines non-tumorigenic lineage differentiation.Q39263949
Copy number variation at 6q13 functions as a long-range regulator and is associated with pancreatic cancer riskQ39455041
Chromosome 5q deletion and epigenetic suppression of the gene encoding alpha-catenin (CTNNA1) in myeloid cell transformationQ40198158
Identification of a herpes simplex labialis susceptibility region on human chromosome 21.Q40429411
Pscan: finding over-represented transcription factor binding site motifs in sequences from co-regulated or co-expressed genesQ43103649
Trisomy and tetrasomy for long arm of chromosome 1 in near-diploid human endometrial adenocarcinomasQ43444710
Underlying functional genomics of fat deposition in adipose tissueQ45345780
Germline copy number variations in BRCA1-associated ovarian cancer patients.Q45909891
RORA, a large common fragile site gene, is involved in cellular stress responseQ46931410
P275copyright licenseCreative Commons Attribution 4.0 InternationalQ20007257
P6216copyright statuscopyrightedQ50423863
P433issue5
P407language of work or nameEnglishQ1860
P921main subjecttranscriptomeQ252857
P304page(s)e96320
P577publication date2014-05-05
P1433published inPLOS OneQ564954
P1476titlePrediction of potential cancer-risk regions based on transcriptome data: towards a comprehensive view
P478volume9