Convergence of DNA methylation and phosphorothioation epigenetics in bacterial genomes

scientific article

Convergence of DNA methylation and phosphorothioation epigenetics in bacterial genomes is …
instance of (P31):
scholarly articleQ13442814

External links are
P356DOI10.1073/PNAS.1702450114
P932PMC publication ID5410841
P698PubMed publication ID28400512

P50authorZixin DengQ89752891
P2093author name stringXi Chen
Peter C Dedon
Xiaolin Wu
Chao Chen
Shi Chen
Si Chen
Lianrong Wang
Yunfu Wang
Susu Jiang
Meijia Gu
P2860cites workDirect detection and sequencing of damaged DNA basesQ22001201
REBASE--a database for DNA restriction and modification: enzymes, genes and genomesQ24644735
Epigenetic gene regulation in the bacterial worldQ24669987
A nomenclature for restriction enzymes, DNA methyltransferases, homing endonucleases and their genesQ24684053
Bacteriophage orphan DNA methyltransferases: insights from their bacterial origin, function, and occurrenceQ26825752
The other face of restriction: modification-dependent enzymesQ26851498
Structural insights into DndE from Escherichia coli B7A involved in DNA phosphorothioation modificationQ27678665
The Epigenomic Landscape of ProkaryotesQ28550136
Construction and characterization of amplifiable multicopy DNA cloning vehicles derived from the P15A cryptic miniplasmidQ29614535
Genomic mapping of phosphorothioates reveals partial modification of short consensus sequencesQ30419110
The complex methylome of the human gastric pathogen Helicobacter pyloriQ30572851
Hahella chejuensis gen. nov., sp. nov., an extracellular-polysaccharide-producing marine bacteriumQ30650562
Direct detection of DNA methylation during single-molecule, real-time sequencingQ33888756
Roles of DNA adenine methylation in regulating bacterial gene expression and virulenceQ34009521
Sensitive and specific single-molecule sequencing of 5-hydroxymethylcytosine.Q34029463
A novel host-specific restriction system associated with DNA backbone S-modification in SalmonellaQ34298216
DNA phosphorothioate modifications influence the global transcriptional response and protect DNA from double-stranded breaks.Q34347760
DNA phosphorothioation is widespread and quantized in bacterial genomes.Q34582855
A new method for generating point mutations in bacterial artificial chromosomes by homologous recombination in Escherichia coliQ34584758
Novel post-replicative DNA modification in Streptomyces: analysis of the preferred modification site of plasmid pIJ101Q34657474
New restriction enzymes discovered from Escherichia coli clinical strains using a plasmid transformation methodQ34760153
In vivo mutational characterization of DndE involved in DNA phosphorothioate modification.Q35289125
Pathological phenotypes and in vivo DNA cleavage by unrestrained activity of a phosphorothioate-based restriction system in SalmonellaQ35552172
A novel restriction-modification system is responsible for temperature-dependent phage resistance in Listeria monocytogenes ECII.Q35817073
Regulation of DNA phosphorothioate modification in Salmonella enterica by DndB.Q35865501
N6-methyl-adenine: an epigenetic signal for DNA-protein interactionsQ36401376
DNA adenine methylation and bacterial pathogenesisQ36663482
Novel genomic island modifies DNA with 7-deazaguanine derivativesQ36710523
Lactococcal plasmid pNP40 encodes a novel, temperature-sensitive restriction-modification system.Q37552862
Regulation of DNA phosphorothioate modifications by the transcriptional regulator DptB in Salmonella.Q38298174
The great GATC: DNA methylation in E. coliQ38670595
A DNA methyltransferase can protect the genome from postdisturbance attack by a restriction-modification gene complex.Q39741220
Restriction and Modification of DNAQ39919645
pBluescript II: gene mapping vectorsQ40539383
A novel DNA modification by sulphurQ42665031
REBASE--a database for DNA restriction and modification: enzymes, genes and genomesQ43214917
Pathogenesis of Escherichia coli diarrheaQ44410196
Pulsed-field gel electrophoresis-based subtyping of DNA degradation-sensitive Salmonella enterica subsp. enterica serovar Livingstone and serovar Cerro isolates obtained from a chicken layer farmQ44798583
Abolition of DNA recognition site resistance to the restriction endonuclease EcoRII.Q53044486
DNA Methylation.Q53054701
Phosphorothioation of DNA in bacteria by dnd genes.Q54432882
A novel DNA modification by sulfur: DndA is a NifS-like cysteine desulfurase capable of assembling DndC as an iron-sulfur cluster protein in Streptomyces lividansQ80240236
Analysis of a genomic island housing genes for DNA S-modification system in Streptomyces lividans 66 and its counterparts in other distantly related bacteriaQ80639664
Functional analysis of spfD gene involved in DNA phosphorothioation in Pseudomonas fluorescens Pf0-1Q83242903
P433issue17
P407language of work or nameEnglishQ1860
P921main subjectepigeneticsQ26939
P304page(s)4501-4506
P577publication date2017-04-11
P1433published inProceedings of the National Academy of Sciences of the United States of AmericaQ1146531
P1476titleConvergence of DNA methylation and phosphorothioation epigenetics in bacterial genomes
P478volume114

Reverse relations

cites work (P2860)
Q64056384A new type of DNA phosphorothioation-based antiviral system in archaea
Q90383762Complete Genome Sequence of the Arcobacter marinus Type Strain JCM 15502
Q57026874DNA phosphorothioate modification - a new multi-functional epigenetic system in bacteria
Q60045721Engineering and modification of microbial chassis for systems and synthetic biology
Q88241569Epigenetic signatures in cardiac fibrosis, special emphasis on DNA methylation and histone modification
Q57802238Genetic mechanisms of arsenic detoxification and metabolism in bacteria
Q52574306ICBS 2017 in Shanghai-Illuminating Life with Chemical Innovation.
Q90051414Metabolic and genetic basis for auxotrophies in Gram-negative species
Q64090759Natural Products Containing 'Rare' Organophosphorus Functional Groups
Q64262177Novel Iodine-induced Cleavage Real-time PCR Assay for Accurate Quantification of Phosphorothioate Modified Sites in Bacterial DNA
Q64967673Occurrence, evolution, and functions of DNA phosphorothioate epigenetics in bacteria.
Q55426732Signature Arsenic Detoxification Pathways in Halomonas sp. Strain GFAJ-1.
Q91595587SspABCD-SspE is a phosphorothioation-sensing bacterial defence system with broad anti-phage activities
Q94451629Structural Analysis of an l-Cysteine Desulfurase from an Ssp DNA Phosphorothioation System
Q58586503Structural basis for the recognition of sulfur in phosphorothioated DNA
Q47597781Synthetic Genomics: From DNA Synthesis to Genome Design.
Q91287194The bacterial epigenome

Search more.