Condensin I associates with structural and gene regulatory regions in vertebrate chromosomes

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Condensin I associates with structural and gene regulatory regions in vertebrate chromosomes is …
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scholarly articleQ13442814

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P819ADS bibcode2013NatCo...4.2537K
P6179Dimensions Publication ID1023571162
P356DOI10.1038/NCOMMS3537
P932PMC publication ID4038772
P698PubMed publication ID24088984
P5875ResearchGate publication ID257309512

P50authorAlicia OshlackQ17517288
William Charles EarnshawQ21004362
Jovana MaksimovicQ46030489
Nick WongQ56438116
Nadia M DavidsonQ57961570
Paul KalitsisQ30512588
P2093author name stringTao Zhang
Damien F Hudson
Ji Hun Kim
P2860cites workUltrafast and memory-efficient alignment of short DNA sequences to the human genomeQ21183894
Model-based analysis of ChIP-Seq (MACS)Q21183902
Cistrome: an integrative platform for transcriptional regulation studiesQ21184018
Streptavidin-Binding Peptide (SBP)-tagged SMC2 allows single-step affinity fluorescence, blotting or purification of the condensin complexQ21284398
Differential contributions of condensin I and condensin II to mitotic chromosome architecture in vertebrate cellsQ24297107
PHF8 mediates histone H4 lysine 20 demethylation events involved in cell cycle progressionQ24338563
The protein composition of mitotic chromosomes determined using multiclassifier combinatorial proteomicsQ24604716
Condensins: universal organizers of chromosomes with diverse functionsQ24617958
Mediator and cohesin connect gene expression and chromatin architectureQ24632695
The TBP-PP2A mitotic complex bookmarks genes by preventing condensin actionQ24644911
Fast and accurate short read alignment with Burrows-Wheeler transformQ24653853
Systematic and integrative analysis of large gene lists using DAVID bioinformatics resourcesQ27860739
edgeR: a Bioconductor package for differential expression analysis of digital gene expression dataQ27860819
The Sequence Alignment/Map format and SAMtoolsQ27860966
Identification of cis-acting sites for condensin loading onto budding yeast chromosomesQ27930322
Condensin binding at distinct and specific chromosomal sites in the Saccharomyces cerevisiae genomeQ27930572
Clustering of yeast tRNA genes is mediated by specific association of condensin with tRNA gene transcription complexes.Q27932659
Kinetochore alignment within the metaphase plate is regulated by centromere stiffness and microtubule depolymerasesQ28275327
Mechanism of hsp70i gene bookmarkingQ28303446
Condensin: crafting the chromosome landscape.Q38094939
Molecular and genetic analysis of condensin function in vertebrate cellsQ39631412
The SMC proteins and the coming of age of the chromosome scaffold hypothesis.Q41078471
A role for CTCF and cohesin in subtelomere chromatin organization, TERRA transcription, and telomere end protection.Q41360849
Mitotic repression of the transcriptional machinery.Q41516335
GtRNAdb: a database of transfer RNA genes detected in genomic sequenceQ41789848
Mitotic chromosomes are compacted laterally by KIF4 and condensin and axially by topoisomerase IIαQ42195700
Condensin regulates rDNA silencing by modulating nucleolar Sir2pQ47248529
A physical map of the chicken genomeQ47608303
Recruitment of condensin to replication origin regions by ParB/SpoOJ promotes chromosome segregation in B. subtilisQ47777256
Closing the ring: a new twist to bacterial chromosome condensationQ47777343
Condensin I stabilizes chromosomes mechanically through a dynamic interaction in live cells.Q53635877
Immunolocalization of CENP-A suggests a distinct nucleosome structure at the inner kinetochore plate of active centromeresQ59483611
Distribution of non-telomeric sites of the (TTAGGG)n telomeric sequence in vertebrate chromosomesQ68787343
Prokaryotic structural maintenance of chromosomes (SMC) proteins: distribution, phylogeny, and comparison with MukBs and additional prokaryotic and eukaryotic coiled-coil proteinsQ77166393
BEDTools: a flexible suite of utilities for comparing genomic featuresQ29547332
Repbase Update, a database of eukaryotic repetitive elementsQ29547460
The UCSC Table Browser data retrieval toolQ29614432
A highly conserved repetitive DNA sequence, (TTAGGG)n, present at the telomeres of human chromosomesQ29617061
NCBI Reference Sequences (RefSeq): current status, new features and genome annotation policyQ29617901
Condensin regulates the stiffness of vertebrate centromeresQ30487316
Contrasting roles of condensin I and condensin II in mitotic chromosome formationQ30513780
Condensin I reveals new insights on mouse meiotic chromosome structure and dynamicsQ33294847
Rapid evolution of mouse Y centromere repeat DNA belies recent sequence stabilityQ33500913
ChIPpeakAnno: a Bioconductor package to annotate ChIP-seq and ChIP-chip dataQ33575507
A super-resolution map of the vertebrate kinetochoreQ33935029
Chickens possess centromeres with both extended tandem repeats and short non-tandem-repetitive sequencesQ34085140
Global mapping of H3K4me1 and H3K4me3 reveals the chromatin state-based cell type-specific gene regulation in human Treg cellsQ34087849
EpiChIP: gene-by-gene quantification of epigenetic modification levelsQ34153347
Distribution of telomeric (TTAGGG)(n) sequences in avian chromosomesQ34158390
Ccq1p and the condensin proteins Cut3p and Cut14p prevent telomere entanglements in the fission yeast Schizosaccharomyces pombeQ34177639
A shared role for RBF1 and dCAP-D3 in the regulation of transcription with consequences for innate immunityQ34229724
Architecture of metaphase chromosomes and chromosome scaffoldsQ34270990
Distinct functions of condensin I and II in mitotic chromosome assemblyQ34372373
ATP-dependent positive supercoiling of DNA by 13S condensin: a biochemical implication for chromosome condensationQ34438428
Condensin is required for nonhistone protein assembly and structural integrity of vertebrate mitotic chromosomesQ34536233
Condensins: organizing and segregating the genomeQ34556670
Mutations in the Drosophila condensin subunit dCAP-G: defining the role of condensin for chromosome condensation in mitosis and gene expression in interphase.Q34569929
Condensin association with histone H2A shapes mitotic chromosomesQ34629750
Mouse telocentric sequences reveal a high rate of homogenization and possible role in Robertsonian translocationQ34695443
The structure of histone-depleted metaphase chromosomesQ34741905
Marking of active genes on mitotic chromosomesQ34742729
At the heart of the chromosome: SMC proteins in actionQ36457726
RBF1 promotes chromatin condensation through a conserved interaction with the Condensin II protein dCAP-D3Q36585506
Proteomic analysis of cartilage proteinsQ37149599
Conserved features of cohesin binding along fission yeast chromosomesQ37282941
Condensin: Architect of mitotic chromosomesQ37421544
Condensin, chromatin crossbarring and chromosome condensationQ38065418
Condensin, cohesin and the control of chromatin states.Q38073446
P4510describes a project that usesImageJQ1659584
P407language of work or nameEnglishQ1860
P304page(s)2537
P577publication date2013-01-01
P1433published inNature CommunicationsQ573880
P1476titleCondensin I associates with structural and gene regulatory regions in vertebrate chromosomes
P478volume4

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cites work (P2860)
Q41971229A genetic screen for functional partners of condensin in fission yeast.
Q48216188A pathway for mitotic chromosome formation.
Q36703597Aurora-A mediated histone H3 phosphorylation of threonine 118 controls condensin I and cohesin occupancy in mitosis.
Q33778704CPF-associated phosphatase activity opposes condensin-mediated chromosome condensation
Q41267837CRISPR/Cas9 Targets Chicken Embryonic Somatic Cells In Vitro and In Vivo and generates Phenotypic Abnormalities.
Q47645730Caenorhabditis elegans Dosage Compensation: Insights into Condensin-Mediated Gene Regulation
Q34577187Centromeric heterochromatin: the primordial segregation machine
Q39756300Condensin I and II Complexes License Full Estrogen Receptor α-Dependent Enhancer Activation.
Q38783815Condensin I and II behaviour in interphase nuclei and cells undergoing premature chromosome condensation
Q91627560Condensin I subunit Cap-G is essential for proper gene expression during the maturation of post-mitotic neurons
Q58554665Condensin action and compaction
Q58715129Condensin controls cellular RNA levels through the accurate segregation of chromosomes instead of directly regulating transcription
Q90726463Condensin locates at transcriptional termination sites in mitosis, possibly releasing mitotic transcripts
Q35952752Condensin promotes the juxtaposition of DNA flanking its loading site in Bacillus subtilis.
Q35916990Condensin targets and reduces unwound DNA structures associated with transcription in mitotic chromosome condensation
Q38759535Condensin, master organizer of the genome.
Q34937008Condensin-mediated chromosome organization and gene regulation
Q28076900Condensin-mediated chromosome organization in fission yeast
Q33746443Cooperation between a hierarchical set of recruitment sites targets the X chromosome for dosage compensation
Q35172920Disruption of a conserved CAP-D3 threonine alters condensin loading on mitotic chromosomes leading to chromosome hypercondensation
Q40374754Does transcription play a role in creating a condensin binding site?
Q34485099Insulator function and topological domain border strength scale with architectural protein occupancy
Q99353748Large domains of heterochromatin direct the formation of short mitotic chromosome loops
Q28596601Loss of RMI2 Increases Genome Instability and Causes a Bloom-Like Syndrome
Q91650145Loss of TOP3B leads to increased R-loop formation and genome instability
Q35002469Mechanisms of x chromosome dosage compensation
Q89762206NCAPG Dynamically Coordinates the Myogenesis of Fetal Bovine Tissue by Adjusting Chromatin Accessibility
Q42418684Nucleosome eviction in mitosis assists condensin loading and chromosome condensation
Q38749912PICH promotes mitotic chromosome segregation: Identification of a novel role in rDNA disjunction.
Q37153489Proteomics Analysis with a Nano Random Forest Approach Reveals Novel Functional Interactions Regulated by SMC Complexes on Mitotic Chromosomes
Q41109745RNA pol II transcript abundance controls condensin accumulation at mitotically up-regulated and heat-shock-inducible genes in fission yeast
Q35416683RNA processing factors Swd2.2 and Sen1 antagonize RNA Pol III-dependent transcription and the localization of condensin at Pol III genes
Q26826804SMC complexes link gene expression and genome architecture
Q34522050SMC complexes: from DNA to chromosomes
Q26744153The Epigenetic Pathways to Ribosomal DNA Silencing
Q38893228The functional role for condensin in the regulation of chromosomal organization during the cell cycle
Q39026613The loading of condensin in the context of chromatin.
Q38994629Transcription-replication conflicts at chromosomal fragile sites-consequences in M phase and beyond

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