| scholarly article | Q13442814 |
| P819 | ADS bibcode | 2010PNAS..107.3639R |
| P356 | DOI | 10.1073/PNAS.0911315106 |
| P932 | PMC publication ID | 2840497 |
| P698 | PubMed publication ID | 20139302 |
| P5875 | ResearchGate publication ID | 41413815 |
| P50 | author | Mark Bender Gerstein | Q6766711 |
| Michael P. Snyder | Q28924918 | ||
| P2093 | author name string | Debasish Raha | |
| Zhong Wang | |||
| Kevin Struhl | |||
| Linfeng Wu | |||
| Zarmik Moqtaderi | |||
| Guoneng Zhong | |||
| P2860 | cites work | A global transcriptional regulatory role for c-Myc in Burkitt's lymphoma cells | Q22066257 |
| Mapping and quantifying mammalian transcriptomes by RNA-Seq | Q22122035 | ||
| MicroRNA genes are transcribed by RNA polymerase II | Q24562649 | ||
| The transcriptional landscape of the yeast genome defined by RNA sequencing | Q24633693 | ||
| Exchange of RNA polymerase II initiation and elongation factors during gene expression in vivo | Q27934996 | ||
| Genome-wide location analysis reveals a role of TFIIS in RNA polymerase III transcription | Q27935493 | ||
| The expanding RNA polymerase III transcriptome | Q28255728 | ||
| Action of alpha-amanitin during pyrophosphorolysis and elongation by RNA polymerase II | Q28295600 | ||
| Nascent RNA sequencing reveals widespread pausing and divergent initiation at human promoters | Q28302903 | ||
| PeakSeq enables systematic scoring of ChIP-seq experiments relative to controls | Q28305773 | ||
| Mapping of transcription factor binding regions in mammalian cells by ChIP: comparison of array- and sequencing-based technologies | Q28306149 | ||
| A chromatin landmark and transcription initiation at most promoters in human cells | Q29547180 | ||
| Divergent transcription from active promoters | Q29614332 | ||
| RNA polymerase III transcribes human microRNAs | Q29618698 | ||
| Extragenic accumulation of RNA polymerase II enhances transcription by RNA polymerase III | Q33307188 | ||
| Global identification of Myc target genes reveals its direct role in mitochondrial biogenesis and its E-box usage in vivo | Q33323393 | ||
| Novel rapidly evolving hominid RNAs bind nuclear factor 90 and display tissue-restricted distribution | Q34687063 | ||
| Spatial organization of transcription by RNA polymerase III. | Q35128056 | ||
| RNA polymerase II stalling: loading at the start prepares genes for a sprint | Q36739436 | ||
| Common mechanisms of promoter recognition by RNA polymerases II and III. | Q38637984 | ||
| Eukaryotic RNA polymerases | Q39824498 | ||
| In vitro and in vivo analysis of the c-myc RNA polymerase III promoter | Q40507065 | ||
| Direct activation of RNA polymerase III transcription by c-Myc | Q40677362 | ||
| Max-independent functions of Myc in Drosophila melanogaster | Q47071837 | ||
| Short transcripts of the ternary complex provide insight into RNA polymerase II elongational pausing. | Q52536804 | ||
| Non-coding RNA production by RNA polymerase III is implicated in cancer | Q79799667 | ||
| P433 | issue | 8 | |
| P921 | main subject | RNA sequencing | Q2542347 |
| P304 | page(s) | 3639-3644 | |
| P577 | publication date | 2010-02-05 | |
| P1433 | published in | Proceedings of the National Academy of Sciences of the United States of America | Q1146531 |
| P1476 | title | Close association of RNA polymerase II and many transcription factors with Pol III genes | |
| P478 | volume | 107 |
| Q50517844 | A Land Plant-Specific Transcription Factor Directly Enhances Transcription of a Pathogenic Noncoding RNA Template by DNA-Dependent RNA Polymerase II. |
| Q34315594 | A bi-Poisson model for clustering gene expression profiles by RNA-seq |
| Q28538765 | A comprehensive tRNA deletion library unravels the genetic architecture of the tRNA pool |
| Q28730938 | A differential sequencing-based analysis of the C. elegans noncoding transcriptome |
| Q89731178 | Abnormal expression of TFIIIB subunits and RNA Pol III genes is associated with hepatocellular carcinoma |
| Q34509209 | Alcohol induces RNA polymerase III-dependent transcription through c-Jun by co-regulating TATA-binding protein (TBP) and Brf1 expression |
| Q39004167 | Allele-specific loss and transcription of the miR-15a/16-1 cluster in chronic lymphocytic leukemia |
| Q35526123 | AlleleSeq: analysis of allele-specific expression and binding in a network framework |
| Q34747069 | Alteration of BRCA1 expression affects alcohol-induced transcription of RNA Pol III-dependent genes |
| Q28740767 | Analysis of genomic variation in non-coding elements using population-scale sequencing data from the 1000 Genomes Project |
| Q35002915 | Autoregulation of an RNA polymerase II promoter by the RNA polymerase III transcription factor III C (TF(III)C) complex |
| Q35095258 | Binding sites analyser (BiSA): software for genomic binding sites archiving and overlap analysis |
| Q35075636 | CENTDIST: discovery of co-associated factors by motif distribution |
| Q34619748 | Cell growth- and differentiation-dependent regulation of RNA polymerase III transcription |
| Q39996434 | Cell-type specific and combinatorial usage of diverse transcription factors revealed by genome-wide binding studies in multiple human cells |
| Q37600033 | ChIP-seq analysis of histone H3K9 trimethylation in peripheral blood mononuclear cells of membranous nephropathy patients |
| Q28274448 | ChIP-seq guidelines and practices of the ENCODE and modENCODE consortia |
| Q30577864 | ChIPBase: a database for decoding the transcriptional regulation of long non-coding RNA and microRNA genes from ChIP-Seq data |
| Q37193225 | Characterization of new RNA polymerase III and RNA polymerase II transcriptional promoters in the Bovine Leukemia Virus genome |
| Q34012041 | Characterizing a collective and dynamic component of chromatin immunoprecipitation enrichment profiles in yeast |
| Q34674389 | Coadaptation of isoacceptor tRNA genes and codon usage bias for translation efficiency in Aedes aegypti and Anopheles gambiae |
| Q30359009 | Condition-specific target prediction from motifs and expression. |
| Q35853414 | Conservation of the relative tRNA composition in healthy and cancerous tissues |
| Q37408576 | DNMT1-interacting RNAs block gene-specific DNA methylation |
| Q56267512 | Dicer-Processed Small RNAs: Rules and Exceptions |
| Q34605617 | Dioxin receptor and SLUG transcription factors regulate the insulator activity of B1 SINE retrotransposons via an RNA polymerase switch. |
| Q35172633 | Dynamic regulation of Schwann cell enhancers after peripheral nerve injury |
| Q64901530 | Dynamic turnover of paused Pol II complexes at human promoters. |
| Q36499775 | ERα mediates alcohol-induced deregulation of Pol III genes in breast cancer cells |
| Q35750824 | Ecotopic viral integration site 1 (EVI1) regulates multiple cellular processes important for cancer and is a synergistic partner for FOS protein in invasive tumors |
| Q64083073 | Effects on prostate cancer cells of targeting RNA polymerase III |
| Q37025114 | Elk1 and AP-1 sites in the TBP promoter mediate alcohol-induced deregulation of Pol III-dependent genes |
| Q47162405 | Enhancer SINEs Link Pol III to Pol II Transcription in Neurons. |
| Q51469413 | Evaluating the Stability of mRNAs and Noncoding RNAs. |
| Q46460539 | Evidence of birth-and-death evolution of 5S rRNA gene in Channa species (Teleostei, Perciformes). |
| Q38702004 | Exploring a common mechanism of alcohol-induced deregulation of RNA Pol III genes in liver and breast cells |
| Q34485058 | Expression of type II chorionic gonadotropin genes supports a role in the male reproductive system |
| Q41952528 | Falling for the dark side of transcription: Nab2 fosters RNA polymerase III transcription |
| Q24612983 | From RNA-seq reads to differential expression results |
| Q24337981 | Gene duplication and neofunctionalization: POLR3G and POLR3GL |
| Q42075763 | Gene-specific RNA polymerase II phosphorylation and the CTD code |
| Q92623484 | Genome-wide analysis of polymerase III-transcribed Alu elements suggests cell-type-specific enhancer function |
| Q35040925 | Genome-wide chromatin occupancy analysis reveals a role for ASH2 in transcriptional pausing. |
| Q35633661 | Genomic binding of Pol III transcription machinery and relationship with TFIIS transcription factor distribution in mouse embryonic stem cells |
| Q39710992 | Genomic binding profiles of functionally distinct RNA polymerase III transcription complexes in human cells |
| Q35046456 | Global genome organization mediated by RNA polymerase III-transcribed genes in fission yeast |
| Q35907644 | Heat shock factor binding in Alu repeats expands its involvement in stress through an antisense mechanism |
| Q36893799 | Human MAF1 targets and represses active RNA polymerase III genes by preventing recruitment rather than inducing long-term transcriptional arrest |
| Q35681626 | Human tRNA genes function as chromatin insulators |
| Q30882366 | Identification of RNA polymerase III-transcribed Alu loci by computational screening of RNA-Seq data |
| Q100635150 | Implication of a new function of human tDNAs in chromatin organization |
| Q37933073 | Inhibiting eukaryotic transcription: Which compound to choose? How to evaluate its activity? |
| Q46780864 | Interplay between polymerase II- and polymerase III-assisted expression of overlapping genes |
| Q39190900 | JUN is a key transcriptional regulator of the unfolded protein response in acute myeloid leukemia |
| Q36810743 | Long non-coding RNAs (lncRNAs) and viral infections |
| Q35779316 | MAF1 represses CDKN1A through a Pol III-dependent mechanism |
| Q37717932 | MYC regulation of cell growth through control of transcription by RNA polymerases I and III. |
| Q29547552 | Mapping and analysis of chromatin state dynamics in nine human cell types |
| Q35548793 | Molecular organization and phylogenetic analysis of 5S rDNA in crustaceans of the genus Pollicipes reveal birth-and-death evolution and strong purifying selection |
| Q35133617 | Nab2 functions in the metabolism of RNA driven by polymerases II and III. |
| Q37317738 | Nuclear β-adrenergic receptors modulate gene expression in adult rat heart |
| Q37630734 | Nucleosome Positioning and NDR Structure at RNA Polymerase III Promoters |
| Q34027627 | Open chromatin defined by DNaseI and FAIRE identifies regulatory elements that shape cell-type identity |
| Q35198329 | PROMoter uPstream Transcripts share characteristics with mRNAs and are produced upstream of all three major types of mammalian promoters |
| Q35100329 | Phosphorylation of histone H3 serine 28 modulates RNA polymerase III-dependent transcription |
| Q35248792 | Pol III binding in six mammals shows conservation among amino acid isotypes despite divergence among tRNA genes. |
| Q47556292 | Polymorphism in Tmem132d regulates expression and anxiety-related behavior through binding of RNA polymerase II complex |
| Q34065439 | Prediction of RNA Polymerase II recruitment, elongation and stalling from histone modification data |
| Q50645951 | RNA Pol II Dynamics Modulate Co-transcriptional Chromatin Modification, CTD Phosphorylation, and Transcriptional Direction. |
| Q55448106 | RNA Polymerase II Activity of Type 3 Pol III Promoters. |
| Q33931284 | RNA polymerase III accurately initiates transcription from RNA polymerase II promoters in vitro. |
| Q36546331 | RNA polymerase III repression by the retinoblastoma tumor suppressor protein |
| Q35086192 | RNA polymerase III transcriptomes in human embryonic stem cells and induced pluripotent stem cells, and relationships with pluripotency transcription factors |
| Q44703836 | RNAP-II transcribes two small RNAs at the promoter and terminator regions of the RNAP-I gene in Saccharomyces cerevisiae |
| Q37854744 | Recent insights into regulation of transcription by RNA polymerase III and the cellular functions of its transcripts. |
| Q35863467 | Recessive mutations in POLR1C cause a leukodystrophy by impairing biogenesis of RNA polymerase III. |
| Q26828605 | Regulation of pol III transcription by nutrient and stress signaling pathways |
| Q37464414 | Role of phosphorylated histone H3 serine 10 in DEN-induced deregulation of Pol III genes and cell proliferation and transformation |
| Q41179648 | SINE transcription by RNA polymerase III is suppressed by histone methylation but not by DNA methylation |
| Q36584652 | Selective repression of SINE transcription by RNA polymerase III. |
| Q58112912 | Sequence characterization of the 5S ribosomal DNA and the internal transcribed spacer (ITS) region in four European Donax species (Bivalvia: Donacidae) |
| Q34738008 | Small ubiquitin-like modifier (SUMO)-mediated repression of the Xenopus Oocyte 5 S rRNA genes |
| Q33620505 | Stable C0T-1 repeat RNA is abundant and is associated with euchromatic interphase chromosomes |
| Q40207967 | Stimulation of Pol III-dependent 5S rRNA and U6 snRNA gene expression by AP-1 transcription factors |
| Q57691689 | TE composition of human long noncoding RNAs and their expression patterns in human tissues |
| Q38045703 | TFIIIC bound DNA elements in nuclear organization and insulation. |
| Q28481434 | Tcf7 is an important regulator of the switch of self-renewal and differentiation in a multipotential hematopoietic cell line |
| Q37395716 | Telomerase reverse transcriptase promotes cancer cell proliferation by augmenting tRNA expression |
| Q45208877 | Telomeric transcriptome from Chironomus riparius (Diptera), a species with noncanonical telomeres |
| Q45410663 | The 5S rDNA gene family in mollusks: characterization of transcriptional regulatory regions, prediction of secondary structures, and long-term evolution, with special attention to Mytilidae mussels |
| Q42132594 | The B-WICH chromatin-remodelling complex regulates RNA polymerase III transcription by promoting Max-dependent c-Myc binding |
| Q24301823 | The BTB and CNC homology 1 (BACH1) target genes are involved in the oxidative stress response and in control of the cell cycle |
| Q34258747 | The MuvB complex sequentially recruits B-Myb and FoxM1 to promote mitotic gene expression. |
| Q34142686 | The evolution and expression of the snaR family of small non-coding RNAs |
| Q24305332 | The histone deacetylase SIRT6 is a tumor suppressor that controls cancer metabolism |
| Q42126016 | The human Pol III transcriptome and gene information flow |
| Q48172115 | The life of U6 small nuclear RNA, from cradle to grave |
| Q27939829 | The poly(A)-binding protein Nab2 functions in RNA polymerase III transcription |
| Q35073265 | The utility of shallow RNA-Seq for documenting differential gene expression in genes with high and low levels of expression |
| Q41696196 | Topological organization and dynamic regulation of human tRNA genes during macrophage differentiation |
| Q37871831 | Transcription by RNA polymerase III: more complex than we thought |
| Q34312883 | Transcription factor co-localization patterns affect human cell type-specific gene expression |
| Q33556144 | Transcription of angiogenin and ribonuclease 4 is regulated by RNA polymerase III elements and a CCCTC binding factor (CTCF)-dependent intragenic chromatin loop |
| Q34561933 | Transcription of the major neurospora crassa microRNA-like small RNAs relies on RNA polymerase III |
| Q37711986 | Transcriptional interference by RNA polymerase III affects expression of the Polr3e gene. |
| Q35204880 | Transcriptional landscape of repetitive elements in normal and cancer human cells |
| Q33961117 | Uncovering the complexity of transcriptomes with RNA-Seq. |
| Q41762524 | Whole-genome expression analysis of mammalian-wide interspersed repeat elements in human cell lines |
| Q37684432 | ZSCAN5B and primate-specific paralogs bind RNA polymerase III genes and extra-TFIIIC (ETC) sites to modulate mitotic progression |
| Q37631864 | c-Jun/c-Fos heterodimers regulate cellular genes via a newly identified class of methylated DNA sequence motifs. |
| Q39057690 | tRNA biology in the omics era: Stress signalling dynamics and cancer progression |
| Q35559965 | tRNA genes protect a reporter gene from epigenetic silencing in mouse cells |
| Q34146296 | tRNASec is transcribed by RNA polymerase II in Trypanosoma brucei but not in humans |
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