Exome sequencing in developmental eye disease leads to identification of causal variants in GJA8, CRYGC, PAX6 and CYP1B1.

scientific article

Exome sequencing in developmental eye disease leads to identification of causal variants in GJA8, CRYGC, PAX6 and CYP1B1. is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.1038/EJHG.2013.268
P932PMC publication ID4060118
P698PubMed publication ID24281366

P50authorJohn GriggQ58236830
Robyn V JamiesonQ59675724
Sonia DavilaQ96123956
Cas SimonsQ55100134
P2093author name stringJames Smith
Vikrant Kumar
Maree Flaherty
Rebecca Storen
Ivan Prokudin
Zai Y Phua
P2860cites workAnophthalmia and microphthalmiaQ21202957
Predicting deleterious amino acid substitutionsQ22065761
ABCB6 mutations cause ocular colobomaQ24301156
Mutation of the bone morphogenetic protein GDF3 causes ocular and skeletal anomaliesQ24311933
The molecular genetics of the human I locus and molecular background explain the partial association of the adult i phenotype with congenital cataractsQ24317368
A novel homeobox gene PITX3 is mutated in families with autosomal-dominant cataracts and ASMDQ24323765
Diagnostic exome sequencing in persons with severe intellectual disabilityQ55670486
Congenital eye malformations: Clinical-epidemiological analysis of 1,124,654 consecutive births in SpainQ60325957
Mutation of the gap junction protein alpha 8 (GJA8) gene causes autosomal recessive cataractQ62127831
Classification of corneal endothelial disorders based on neural crest originQ70571020
Heterozygous mutations of OTX2 cause severe ocular malformationsQ24530768
Sequence analysis and homology modeling suggest that primary congenital glaucoma on 2p21 results from mutations disrupting either the hinge region or the conserved core structures of cytochrome P4501B1.Q24538817
Identification of dominant FOXE3 and PAX6 mutations in patients with congenital cataract and aniridiaQ24628643
FOXE3 plays a significant role in autosomal recessive microphthalmiaQ24630469
A novel, non-stop mutation in FOXE3 causes an autosomal dominant form of variable anterior segment dysgenesis including Peters anomalyQ24633479
Fast and accurate short read alignment with Burrows-Wheeler transformQ24653853
Phenotypic heterogeneity of CYP1B1: mutations in a patient with Peters' anomalyQ24680241
The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing dataQ27860742
A method and server for predicting damaging missense mutationsQ27860835
The Sequence Alignment/Map format and SAMtoolsQ27860966
Domain disruption and mutation of the bZIP transcription factor, MAF, associated with cataract, ocular anterior segment dysgenesis and colobomaQ28214342
Mutations at the PAX6 locus are found in heterogeneous anterior segment malformations including Peters' anomalyQ28252261
ABCB6 is dispensable for erythropoiesis and specifies the new blood group system LangereisQ28257493
Mutation of solute carrier SLC16A12 associates with a syndrome combining juvenile cataract with microcornea and renal glucosuriaQ28270419
ANNOVAR: functional annotation of genetic variants from high-throughput sequencing dataQ29547161
MutationTaster evaluates disease-causing potential of sequence alterationsQ29615749
Targeted 'next-generation' sequencing in anophthalmia and microphthalmia patients confirms SOX2, OTX2 and FOXE3 mutationsQ34113152
Mutations in SOX2 cause anophthalmiaQ34180637
Novel SOX2 partner-factor domain mutation in a four-generation familyQ34327268
Novel mutations in GJA8 associated with autosomal dominant congenital cataract and microcornea.Q34512148
Genetic heterogeneity in microcornea-cataract: five novel mutations in CRYAA, CRYGD, and GJA8.Q34667888
Retinoic acid receptor signaling regulates choroid fissure closure through independent mechanisms in the ventral optic cup and periocular mesenchymeQ35008311
Ocular coloboma: a reassessment in the age of molecular neuroscienceQ35444452
Investigation of crystallin genes in familial cataract, and report of two disease associated mutations.Q35591625
Next-generation genetic testing for retinitis pigmentosaQ36375321
Mutations in BMP4 cause eye, brain, and digit developmental anomalies: overlap between the BMP4 and hedgehog signaling pathwaysQ36719098
Anterior segment mesenchymal dysgenesis in a large Australian family is associated with the recurrent 17 bp duplication in PITX3.Q36965768
Effects of alpha-crystallin on lens cell function and cataract pathology.Q37622325
dbNSFP: a lightweight database of human nonsynonymous SNPs and their functional predictionsQ42059080
Congenital eye malformations: clinical-epidemiological analysis of 1,124,654 consecutive births in SpainQ43453639
Heterozygous loss-of-function variants in CYP1B1 predispose to primary open-angle glaucoma.Q50335708
RALDH-independent generation of retinoic acid during vertebrate embryogenesis by CYP1B1.Q51058548
Deletion at 14q22-23 indicates a contiguous gene syndrome comprising anophthalmia, pituitary hypoplasia, and ear anomalies.Q52012746
Further support of the role of CYP1B1 in patients with Peters anomaly.Q52016463
Mutations in CYP1B1 cause primary congenital glaucoma by reduction of either activity or abundance of the enzyme.Q54174869
P433issue7
P921main subjecteye diseaseQ3041498
P304page(s)907-915
P577publication date2013-11-27
P1433published inEuropean Journal of Human GeneticsQ2155433
P1476titleExome sequencing in developmental eye disease leads to identification of causal variants in GJA8, CRYGC, PAX6 and CYP1B1.
P478volume22

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cites work (P2860)
Q39679098A Baseline Algorithm for Molecular Diagnosis of Genetic Eye Diseases: Ophthalmologist's Perspective
Q47562334A recurrent, non-penetrant sequence variant, p.Arg266Cys in Growth/Differentiation Factor 3 (GDF3) in a female with unilateral anophthalmia and skeletal anomalies
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Q33707516Diagnostic exome sequencing in 266 Dutch patients with visual impairment.
Q30425446Exome sequencing identifies novel and recurrent mutations in GJA8 and CRYGD associated with inherited cataract
Q35674974Exome sequencing in 32 patients with anophthalmia/microphthalmia and developmental eye defects
Q37145751Expanding the clinical spectrum of COL1A1 mutations in different forms of glaucoma
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Q39023010Genetic Advances in Microphthalmia
Q58804677Identification of a missense mutation in MIP gene via mutation analysis of a Guangxi Zhuang ethnic pedigree with congenital nuclear cataracts
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Q28118377Mutations in SIPA1L3 cause eye defects through disruption of cell polarity and cytoskeleton organization
Q49723099New GJA8 variants and phenotypes highlight its critical role in a broad spectrum of eye anomalies.
Q48215852New mutations in GJA8 expand the phenotype to include total sclerocornea
Q33671000Novel mutations in CRYGC are associated with congenital cataracts in Chinese families
Q26851574Ocular cytochrome P450s and transporters: roles in disease and endobiotic and xenobiotic disposition
Q96136359Revealing hidden genetic diagnoses in the ocular anterior segment disorders
Q56889427Single nucleotide differences (SNDs) continue to contaminate the dbSNP database with consequences for human genomics and health
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Q35395210Whole exome sequence analysis of Peters anomaly

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