| scholarly article | Q13442814 |
| P6179 | Dimensions Publication ID | 1085969843 |
| P356 | DOI | 10.1038/S41598-017-03745-2 |
| P2888 | exact match | https://scigraph.springernature.com/pub.10.1038/s41598-017-03745-2 |
| P932 | PMC publication ID | 5472625 |
| P698 | PubMed publication ID | 28620219 |
| P2093 | author name string | Marasri Ruengjitchatchawalya | |
| Wanapinun Nawae | |||
| Supa Hannongbua | |||
| P2860 | cites work | Biosynthesis and insecticidal properties of plant cyclotides: the cyclic knotted proteins from Oldenlandia affinis | Q24555208 |
| Lipids and membrane microdomains in HIV-1 replication | Q27489393 | ||
| Twists, knots, and rings in proteins. Structural definition of the cyclotide framework | Q27640161 | ||
| A Specific Cholesterol Binding Site Is Established by the 2.8 Å Structure of the Human β2-Adrenergic Receptor | Q27650801 | ||
| A Synthetic mirror image of kalata B1 reveals that cyclotide activity is independent of a protein receptor | Q27674170 | ||
| VMD: visual molecular dynamics | Q27860554 | ||
| Functional rafts in cell membranes | Q27860768 | ||
| GROMACS 4: Algorithms for Highly Efficient, Load-Balanced, and Scalable Molecular Simulation | Q27860944 | ||
| GROMACS: fast, flexible, and free | Q27860998 | ||
| Asymmetric lipid membranes: towards more realistic model systems | Q28084841 | ||
| Lipid rafts and signal transduction | Q28131735 | ||
| Discovery, structure and biological activities of the cyclotides | Q28293331 | ||
| Role of lipids in spheroidal high density lipoproteins | Q28475955 | ||
| Formation of raft-like assemblies within clusters of influenza hemagglutinin observed by MD simulations | Q28486142 | ||
| The MARTINI force field: coarse grained model for biomolecular simulations | Q29617215 | ||
| Cholesterol behavior in asymmetric lipid bilayers: insights from molecular dynamics simulations | Q85832015 | ||
| How cholesterol is distributed between monolayers in asymmetric lipid membranes | Q87423344 | ||
| Key molecular requirements for raft formation in lipid/cholesterol membranes | Q41909495 | ||
| Domain formation in model membranes studied by pulsed-field gradient-NMR: the role of lipid polyunsaturation | Q42579082 | ||
| Molecular view of cholesterol flip-flop and chemical potential in different membrane environments. | Q43293237 | ||
| GridMAT-MD: a grid-based membrane analysis tool for use with molecular dynamics | Q44943827 | ||
| Backbone cyclised peptides from plants show molluscicidal activity against the rice pest Pomacea canaliculata (golden apple snail). | Q46537354 | ||
| Lipid organization of the plasma membrane | Q46837671 | ||
| Anti-HIV cyclotides from the Chinese medicinal herb Viola yedoensis. | Q46849544 | ||
| The MARTINI Coarse-Grained Force Field: Extension to Proteins. | Q47741405 | ||
| Gly(6) of kalata B1 is critical for the selective binding to phosphatidylethanolamine membranes | Q47845718 | ||
| Molecular dynamics with coupling to an external bath | Q57569060 | ||
| Coarse Grained Model for Semiquantitative Lipid Simulations | Q59410240 | ||
| The role of the cyclic peptide backbone in the anti-HIV activity of the cyclotide kalata B1 | Q80546763 | ||
| Studies on the membrane interactions of the cyclotides kalata B1 and kalata B6 on model membrane systems by surface plasmon resonance | Q81268599 | ||
| Modulation of the spontaneous curvature and bending rigidity of lipid membranes by interfacially adsorbed amphipathic peptides | Q81274297 | ||
| Bending membranes | Q84928006 | ||
| A biomolecular force field based on the free enthalpy of hydration and solvation: the GROMOS force-field parameter sets 53A5 and 53A6 | Q29617517 | ||
| Coarse-grained MD simulations of membrane protein-bilayer self-assembly. | Q30368740 | ||
| Organization, dynamics, and segregation of Ras nanoclusters in membrane domains | Q30514229 | ||
| Phosphatidylethanolamine binding is a conserved feature of cyclotide-membrane interactions | Q30525336 | ||
| Computational analysis of local membrane properties | Q30562222 | ||
| Assessing the nature of lipid raft membranes | Q33275288 | ||
| MDAnalysis: a toolkit for the analysis of molecular dynamics simulations | Q33875319 | ||
| Plasma membrane rafts play a critical role in HIV-1 assembly and release | Q33950207 | ||
| Lipid composition and fluidity of the human immunodeficiency virus | Q34048036 | ||
| Lipid packing drives the segregation of transmembrane helices into disordered lipid domains in model membranes | Q34157508 | ||
| Describing the mechanism of antimicrobial peptide action with the interfacial activity model | Q34204118 | ||
| Lipid rafts: structure, function and role in HIV, Alzheimer's and prion diseases | Q34301502 | ||
| Implications of lipid microdomains for membrane curvature, budding and fission | Q34309080 | ||
| The HIV lipidome: a raft with an unusual composition | Q34479764 | ||
| Dynamic scenario of membrane binding process of kalata b1 | Q34634734 | ||
| The molecular face of lipid rafts in model membranes. | Q34873584 | ||
| The biological activity of the prototypic cyclotide kalata b1 is modulated by the formation of multimeric pores | Q34984555 | ||
| Decoding the membrane activity of the cyclotide kalata B1: the importance of phosphatidylethanolamine phospholipids and lipid organization on hemolytic and anti-HIV activities | Q35085127 | ||
| Lipid clustering correlates with membrane curvature as revealed by molecular simulations of complex lipid bilayers | Q35362110 | ||
| An unusual structural motif of antimicrobial peptides containing end-to-end macrocycle and cystine-knot disulfides | Q35588664 | ||
| Bending Rigidities and Interdomain Forces in Membranes with Coexisting Lipid Domains | Q35755021 | ||
| Going Backward: A Flexible Geometric Approach to Reverse Transformation from Coarse Grained to Atomistic Models. | Q35844868 | ||
| Biological implications of cell fusion. | Q36163604 | ||
| Lipid composition and fluidity of the human immunodeficiency virus envelope and host cell plasma membranes | Q36342211 | ||
| Cyclotides insert into lipid bilayers to form membrane pores and destabilize the membrane through hydrophobic and phosphoethanolamine-specific interactions | Q36481904 | ||
| Discovery, structure and biological activities of cyclotides. | Q37496224 | ||
| Defining the membrane disruption mechanism of kalata B1 via coarse-grained molecular dynamics simulations | Q37542954 | ||
| Coarse-grained models reveal functional dynamics--II. Molecular dynamics simulation at the coarse-grained level--theories and biological applications. | Q37610801 | ||
| Importance of the cell membrane on the mechanism of action of cyclotides | Q37977144 | ||
| Perspective on the Martini model. | Q38109488 | ||
| Lipidbook: a public repository for force-field parameters used in membrane simulations. | Q38371294 | ||
| Comparative lipidomics analysis of HIV-1 particles and their producer cell membrane in different cell lines. | Q39218268 | ||
| Cyclotide-membrane interactions: defining factors of membrane binding, depletion and disruption | Q39501221 | ||
| Human immunodeficiency virus type 1 uses lipid raft-colocalized CD4 and chemokine receptors for productive entry into CD4(+) T cells | Q39683422 | ||
| P275 | copyright license | Creative Commons Attribution 4.0 International | Q20007257 |
| P6216 | copyright status | copyrighted | Q50423863 |
| P4510 | describes a project that uses | scikit-learn | Q1026367 |
| P433 | issue | 1 | |
| P407 | language of work or name | English | Q1860 |
| P304 | page(s) | 3638 | |
| P577 | publication date | 2017-06-15 | |
| P1433 | published in | Scientific Reports | Q2261792 |
| P1476 | title | Molecular dynamics exploration of poration and leaking caused by Kalata B1 in HIV-infected cell membrane compared to host and HIV membranes | |
| P478 | volume | 7 |
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