Transcriptome sequencing and annotation of the microalgae Dunaliella tertiolecta: pathway description and gene discovery for production of next-generation biofuels.

scientific article

Transcriptome sequencing and annotation of the microalgae Dunaliella tertiolecta: pathway description and gene discovery for production of next-generation biofuels. is …
instance of (P31):
scholarly articleQ13442814

External links are
P6179Dimensions Publication ID1022287222
P356DOI10.1186/1471-2164-12-148
P932PMC publication ID3061936
P698PubMed publication ID21401935
P5875ResearchGate publication ID50394141

P50authorJordan PecciaQ88545917
Kyle BibbyQ40050997
Berat Z HaznedarogluQ55487466
P2093author name stringHamid Rismani-Yazdi
P2860cites workIdentification and subcellular localization of starch-metabolizing enzymes in the green alga Dunaliella marinaQ86891876
F ROM B ACTERIAL G LYCOGEN TO S TARCH : Understanding the Biogenesis of the Plant Starch GranuleQ22255666
Gene ontology: tool for the unification of biologyQ23781406
Use of U.S. Croplands for Biofuels Increases Greenhouse Gases Through Emissions from Land-Use ChangeQ24289134
KEGG: Kyoto Encyclopedia of Genes and GenomesQ24548371
Genetic engineering of algae for enhanced biofuel productionQ24629425
High-throughput functional annotation and data mining with the Blast2GO suiteQ24657550
Phospholipid:diacylglycerol acyltransferase: an enzyme that catalyzes the acyl-CoA-independent formation of triacylglycerol in yeast and plantsQ24675283
SILVA: a comprehensive online resource for quality checked and aligned ribosomal RNA sequence data compatible with ARBQ24685829
Basic local alignment search toolQ25938991
Modification of seed oil content and acyl composition in the brassicaceae by expression of a yeast sn-2 acyltransferase geneQ27936776
Biodiesel from microalgaeQ28292295
Microalgal triacylglycerols as feedstocks for biofuel production: perspectives and advancesQ29547639
KAAS: an automatic genome annotation and pathway reconstruction serverQ29617232
Microalgae for oil: strain selection, induction of lipid synthesis and outdoor mass cultivation in a low-cost photobioreactorQ29618088
Automated genome annotation and pathway identification using the KEGG Orthology (KO) as a controlled vocabularyQ33213845
Analysis of the Pythium ultimum transcriptome using Sanger and Pyrosequencing approachesQ33384963
Sequencing and de novo analysis of a coral larval transcriptome using 454 GSFlxQ33444290
Algal lipid bodies: stress induction, purification, and biochemical characterization in wild-type and starchless Chlamydomonas reinhardtiiQ33514256
Transcriptome sequencing in an ecologically important tree species: assembly, annotation, and marker discoveryQ33541331
RNA interference silencing of a major lipid droplet protein affects lipid droplet size in Chlamydomonas reinhardtiiQ33585942
De novo characterization of a whitefly transcriptome and analysis of its gene expression during development.Q33614384
Changes in transcript abundance in Chlamydomonas reinhardtii following nitrogen deprivation predict diversion of metabolismQ33714066
The maternal and early embryonic transcriptome of the milkweed bug Oncopeltus fasciatus.Q33803498
Enzymes of triacylglycerol synthesis and their regulationQ33974340
Increased lipid accumulation in the Chlamydomonas reinhardtii sta7-10 starchless isoamylase mutant and increased carbohydrate synthesis in complemented strains.Q34055189
Biodiesel from algae: challenges and prospectsQ34110663
Fatty acid biosynthesis in microorganisms being used for Single Cell Oil productionQ35979331
Trends in biotechnological production of fuel ethanol from different feedstocks.Q37044825
The relocation of starch metabolism to chloroplasts: when, why and how.Q37282052
Glycerol-3-phosphate acyltransferases: rate limiting enzymes of triacylglycerol biosynthesisQ37332722
Osmotic responses of Dunaliella to the changes of salinityQ37388477
Dunaliella biotechnology: methods and applicationsQ37401862
Enhancement of lipid production using biochemical, genetic and transcription factor engineering approachesQ37476048
Unraveling algal lipid metabolism: Recent advances in gene identification.Q37779939
Rapid transcriptome and proteome profiling of a non-model marine invertebrate, Bugula neritinaQ38506149
Effects of nitrogen sources on cell growth and lipid accumulation of green alga Neochloris oleoabundansQ40046672
Prospects for increasing starch and sucrose yields for bioethanol productionQ40092359
Lipid biosynthesis.Q40462846
Rapid transcriptome characterization for a nonmodel organism using 454 pyrosequencing.Q42030448
Modification of Brassica napus seed oil by expression of the Escherichia coli fabH gene, encoding 3-ketoacyl-acyl carrier protein synthase III.Q42685426
Enzymatic pretreatment of Chlamydomonas reinhardtii biomass for ethanol productionQ43135126
Cloning and functional characterization of a phospholipid:diacylglycerol acyltransferase from ArabidopsisQ44973369
A Cerulenin Insensitive Short Chain 3-Ketoacyl-Acyl Carrier Protein Synthase in Spinacia oleracea LeavesQ47924361
Characterization of a plastid triacylglycerol lipase from ArabidopsisQ48081966
Dynamic exploration and editing of KEGG pathway diagramsQ48422297
Sustainability evaluation of biodiesel production using multicriteria decision-makingQ56522455
The debate on the pathway of starch synthesis: a closer look at low-starch mutants lacking plastidial phosphoglucomutase supports the chloroplast-localized pathwayQ58036605
Identification and functional expression of a type 2 acyl-CoA:diacylglycerol acyltransferase (DGAT2) in developing castor bean seeds which has high homology to the major triglyceride biosynthetic enzyme of fungi and animalsQ79329635
Osmoregulation in Dunaliella, Part II: Photosynthesis and starch contribute carbon for glycerol synthesis during a salt stress in Dunaliella tertiolectaQ80978016
Effects of CO(2) Concentration during Growth on Fatty Acid Composition in MicroalgaeQ83270194
Effect of salt concentration on intracellular accumulation of lipids and triacylglyceride in marine microalgae Dunaliella cellsQ83825299
Dunaliella as an attractive candidate for molecular farmingQ84958945
P407language of work or nameEnglishQ1860
P921main subjectbiofuelQ128991
transcriptomeQ252857
microphyteQ589518
gene discoveryQ129262352
Dunaliella tertiolectaQ61726980
P304page(s)148
P577publication date2011-03-14
P1433published inBMC GenomicsQ15765854
P1476titleTranscriptome sequencing and annotation of the microalgae Dunaliella tertiolecta: pathway description and gene discovery for production of next-generation biofuels
P478volume12

Reverse relations

cites work (P2860)
Q34871648A novel glucagon-like peptide 1 peptide identified from Ophisaurus harti
Q38616467Acetyl-CoA synthetase is activated as part of the PDH-bypass in the oleaginous green alga Chlorella desiccata.
Q28661892Agrigenomics for microalgal biofuel production: an overview of various bioinformatics resources and recent studies to link OMICS to bioenergy and bioeconomy
Q30777763AlgaePath: comprehensive analysis of metabolic pathways using transcript abundance data from next-generation sequencing in green algae.
Q37609293Analysis of carotenogenic genes promoters and WRKY transcription factors in response to salt stress in Dunaliella bardawil
Q28710146Bio-crude transcriptomics: gene discovery and metabolic network reconstruction for the biosynthesis of the terpenome of the hydrocarbon oil-producing green alga, Botryococcus braunii race B (Showa)
Q33957507Comparative analyses of lipidomes and transcriptomes reveal a concerted action of multiple defensive systems against photooxidative stress in Haematococcus pluvialis
Q49590578De novo Assembly and Annotation of the Antarctic Alga Prasiola crispa Transcriptome
Q33559148De novo assembly and characterization of leaf transcriptome for the development of functional molecular markers of the extremophile multipurpose tree species Prosopis alba
Q34228949De novo assembly and characterization of the root transcriptome of Aegilops variabilis during an interaction with the cereal cyst nematode
Q42084277De novo assembly of the perennial ryegrass transcriptome using an RNA-Seq strategy.
Q34457736De novo sequencing and analysis of the Ulva linza transcriptome to discover putative mechanisms associated with its successful colonization of coastal ecosystems
Q100634208De novo transcriptome analysis of Chlorella sorokiniana: effect of glucose assimilation, and moderate light intensity
Q35276160De novo transcriptome analysis of an aerial microalga Trentepohlia jolithus: pathway description and gene discovery for carbon fixation and carotenoid biosynthesis
Q28658593De novo transcriptome profiling uncovers a drastic downregulation of photosynthesis upon nitrogen deprivation in the nonmodel green alga Botryosphaerella sudeticus
Q37286118De novo transcriptomic analysis of Chlorella sorokiniana reveals differential genes expression in photosynthetic carbon fixation and lipid production
Q21202055De novo transcriptomic analysis of hydrogen production in the green alga Chlamydomonas moewusii through RNA-Seq
Q34406110Deep insight into the Ganoderma lucidum by comprehensive analysis of its transcriptome
Q41400930Dynamic metabolic profiling of cyanobacterial glycogen biosynthesis under conditions of nitrate depletion
Q37716881Elevated acetyl-CoA by amino acid recycling fuels microalgal neutral lipid accumulation in exponential growth phase for biofuel production
Q35759675Enhanced acetyl-CoA production is associated with increased triglyceride accumulation in the green alga Chlorella desiccata.
Q28743728Examination of triacylglycerol biosynthetic pathways via de novo transcriptomic and proteomic analyses in an unsequenced microalga
Q36287689Exploring the transcriptome of non-model oleaginous microalga Dunaliella tertiolecta through high-throughput sequencing and high performance computing.
Q30381924Expression Comparison of Oil Biosynthesis Genes in Oil Palm Mesocarp Tissue Using Custom Array.
Q38469991Genes regulating lipid and protein metabolism are highly expressed in mammary gland of lactating dairy goats
Q89834400Genome Sequencing and Analysis of Thraustochytriidae sp. SZU445 Provides Novel Insights into the Polyunsaturated Fatty Acid Biosynthesis Pathway
Q51837526Homologous sense and antisense expression of a gene in Dunaliella tertiolecta.
Q35636266Interaction of Temperature and Photoperiod Increases Growth and Oil Content in the Marine Microalgae Dunaliella viridis.
Q50235134Introducing Dunaliella LIP promoter containing light-inducible motifs improves transgenic expression in Chlamydomonas reinhardtii
Q59293830Isolation and Characterization of Native Microalgae from the Peruvian Amazon with Potential for Biodiesel Production
Q33568725Lipid production and molecular dynamics simulation for regulation of accD gene in cyanobacteria under different N and P regimes
Q26749585Metabolic Engineering of Microalgal Based Biofuel Production: Prospects and Challenges
Q89440950Molecular insight into the metabolic activities of a protein-rich micro alga, Arthrospira platensis by de novo transcriptome analysis
Q50487226Morphological and spectrometric analyses of lipids accumulation in a novel oleaginous microalga, Eustigmatos cf. polyphem (Eustigmatophyceae).
Q35452146Morphological changes of Paulownia seedlings infected phytoplasmas reveal the genes associated with witches' broom through AFLP and MSAP.
Q37416627Nitrogen-induced metabolic changes and molecular determinants of carbon allocation in Dunaliella tertiolecta
Q39388490Patterns of carbohydrate and fatty acid changes under nitrogen starvation in the microalgae Haematococcus pluvialis and Nannochloropsis sp.
Q35166821Phenotype and transcriptome analysis reveals chloroplast development and pigment biosynthesis together influenced the leaf color formation in mutants of Anthurium andraeanum 'Sonate'.
Q28727404Phylogenomic study of lipid genes involved in microalgal biofuel production-candidate gene mining and metabolic pathway analyses
Q28607051RNA-Seq transcriptomic analysis with Bag2D software identifies key pathways enhancing lipid yield in a high lipid-producing mutant of the non-model green alga Dunaliella tertiolecta
Q30886773Targeted Integration of RNA-Seq and Metabolite Data to Elucidate Curcuminoid Biosynthesis in Four Curcuma Species
Q30560800The Bionanoprobe: hard X-ray fluorescence nanoprobe with cryogenic capabilities.
Q30461308The Physalis peruviana leaf transcriptome: assembly, annotation and gene model prediction.
Q28076956The dilemma for lipid productivity in green microalgae: importance of substrate provision in improving oil yield without sacrificing growth
Q39362606The salt-regulated element in the promoter of lycopene β-cyclase gene confers a salt regulatory pattern in carotenogenesis of Dunaliella bardawil.
Q50248447The transcriptome of Euglena gracilis reveals unexpected metabolic capabilities for carbohydrate and natural product biochemistry.
Q28597343Transcript level coordination of carbon pathways during silicon starvation-induced lipid accumulation in the diatom Thalassiosira pseudonana
Q35627833Transcriptome Analysis Comparison of Lipid Biosynthesis in the Leaves and Developing Seeds of Brassica napus
Q35814434Transcriptome Analysis in Haematococcus pluvialis: Astaxanthin Induction by Salicylic Acid (SA) and Jasmonic Acid (JA)
Q34907844Transcriptome analysis of duck liver and identification of differentially expressed transcripts in response to duck hepatitis A virus genotype C infection
Q28542382Transcriptome analysis of the oil-rich tea plant, Camellia oleifera, reveals candidate genes related to lipid metabolism
Q28680795Transcriptome analysis of yellow horn (Xanthoceras sorbifolia Bunge): a potential oil-rich seed tree for biodiesel in China
Q34768693Transcriptome analysis reveals unique C4-like photosynthesis and oil body formation in an arachidonic acid-rich microalga Myrmecia incisa Reisigl H4301
Q35175540Transcriptome assembly and analysis of Tibetan Hulless Barley (Hordeum vulgare L. var. nudum) developing grains, with emphasis on quality properties
Q42373460Transcriptome sequencing and annotation of the halophytic microalga Dunaliella salina
Q21134729Transcriptome sequencing and characterization for the sea cucumber Apostichopus japonicus (Selenka, 1867)
Q51652705Transcriptome sequencing and comparative analysis of Schizochytrium mangrovei PQ6 at different cultivation times.
Q34718493Transcriptome sequencing of Zhikong scallop (Chlamys farreri) and comparative transcriptomic analysis with Yesso scallop (Patinopecten yessoensis).
Q34322407Transcriptome survey of Patagonian southern beech Nothofagus nervosa (= N. Alpina): assembly, annotation and molecular marker discovery
Q52347422Transcriptomic analysis of Perilla frutescens seed to insight into the biosynthesis and metabolic of unsaturated fatty acids.
Q41853052Transcriptomic analysis of a moderately growing subisolate Botryococcus braunii 779 (Chlorophyta) in response to nitrogen deprivation
Q36548104Transcriptomic analysis of the oleaginous microalga Neochloris oleoabundans reveals metabolic insights into triacylglyceride accumulation
Q28486092Transcriptomic study reveals widespread spliced leader trans-splicing, short 5'-UTRs and potential complex carbon fixation mechanisms in the euglenoid Alga Eutreptiella sp
Q49384606Triacylglycerol is produced from starch and polar lipids in the green alga Dunaliella tertiolecta
Q35913236Use of De Novo Transcriptome Libraries to Characterize a Novel Oleaginous Marine Chlorella Species during the Accumulation of Triacylglycerols

Search more.