Genome-wide identification and expression profiling of auxin response factor (ARF) gene family in maize

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Genome-wide identification and expression profiling of auxin response factor (ARF) gene family in maize is …
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scholarly articleQ13442814

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P6179Dimensions Publication ID1038875965
P356DOI10.1186/1471-2164-12-178
P932PMC publication ID3082248
P698PubMed publication ID21473768
P5875ResearchGate publication ID51033074

P50authorRamesh Namdeo PudakeQ56797513
Ganggang GuoQ86542863
P2093author name stringZhongfu Ni
Qixin Sun
Yirong Zhang
Zhaorong Hu
Hongyan Xing
Guofang Xing
P2860cites workThe B73 Maize Genome: Complexity, Diversity, and DynamicsQ22065899
The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis toolsQ24248165
MicroRNA-directed regulation of Arabidopsis AUXIN RESPONSE FACTOR17 is essential for proper development and modulates expression of early auxin response genesQ24522760
Antiquity of microRNAs and their targets in land plantsQ24529143
A database analysis method identifies an endogenous trans-acting short-interfering RNA that targets the Arabidopsis ARF2, ARF3, and ARF4 genesQ24530111
Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genesQ24534395
The roles of auxin response factor domains in auxin-responsive transcriptionQ24541418
SGS3 and SGS2/SDE1/RDR6 are required for juvenile development and the production of trans-acting siRNAs in ArabidopsisQ24563174
Protein-protein interactions among the Aux/IAA proteinsQ24654611
Early genes and auxin actionQ24670098
MrBayes 3: Bayesian phylogenetic inference under mixed modelsQ26778438
The evolutionary fate and consequences of duplicate genesQ27861065
AUXIN RESPONSE FACTOR1 and AUXIN RESPONSE FACTOR2 regulate senescence and floral organ abscission in Arabidopsis thaliana.Q52038799
Identification of protein-binding DNA sequences in an auxin-regulated gene of soybeanQ70708243
Composite structure of auxin response elementsQ71791429
The NPH4 locus encodes the auxin response factor ARF7, a conditional regulator of differential growth in aerial Arabidopsis tissueQ73790207
The massugu1 mutation of Arabidopsis identified with failure of auxin-induced growth curvature of hypocotyl confers auxin insensitivity to hypocotyl and leafQ73817031
Aux/IAA proteins repress expression of reporter genes containing natural and highly active synthetic auxin response elementsQ73945898
AUX/IAA proteins are active repressors, and their stability and activity are modulated by auxinQ77374949
How does auxin turn on genes?Q77388402
NPH4, a conditional modulator of auxin-dependent differential growth responses in ArabidopsisQ77660367
PICKLE is required for SOLITARY-ROOT/IAA14-mediated repression of ARF7 and ARF19 activity during Arabidopsis lateral root initiationQ79160657
Control of root cap formation by MicroRNA-targeted auxin response factors in ArabidopsisQ80352059
Convergence of signaling pathways in the control of differential cell growth in ArabidopsisQ80421547
The Arabidopsis transcription factor MYB77 modulates auxin signal transductionQ80735875
Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of ArabidopsisQ81465170
Specification of leaf polarity in Arabidopsis via the trans-acting siRNA pathwayQ83304554
Prediction of plant microRNA targetsQ28219387
Repression of AUXIN RESPONSE FACTOR10 by microRNA160 is critical for seed germination and post-germination stagesQ28239195
Trans-acting siRNA-mediated repression of ETTIN and ARF4 regulates heteroblasty in ArabidopsisQ28767101
Bayesian inference of phylogeny and its impact on evolutionary biologyQ29547502
Ancient polyploidization predating divergence of the cereals, and its consequences for comparative genomicsQ29616221
Physical and genetic structure of the maize genome reflects its complex evolutionary historyQ33292018
ETTIN patterns the Arabidopsis floral meristem and reproductive organsQ33368407
Identification of transcriptome induced in roots of maize seedlings at the late stage of waterloggingQ33672322
Auxin and ETTIN in Arabidopsis gynoecium morphogenesis.Q33914805
Regulation of AUXIN RESPONSE FACTOR3 by TAS3 ta-siRNA affects developmental timing and patterning in ArabidopsisQ33995688
PlantCARE, a database of plant cis-acting regulatory elements and a portal to tools for in silico analysis of promoter sequences.Q34010549
ARF1, a transcription factor that binds to auxin response elementsQ34429300
The evolution of gene duplicatesQ34586458
Auxin-responsive gene expression: genes, promoters and regulatory factorsQ34660589
Uneven chromosome contraction and expansion in the maize genome.Q35056712
Structure and evolution of cereal genomesQ35593015
Activation and repression of transcription by auxin-response factorsQ36373022
Auxin response factorsQ36953926
Auxin response factors ARF6 and ARF8 promote jasmonic acid production and flower maturationQ38322014
Heterologous expression of the TsVP gene improves the drought resistance of maizeQ39174481
Genome-wide analysis of the auxin response factors (ARF) gene family in rice (Oryza sativa).Q40226997
Close split of sorghum and maize genome progenitorsQ40254149
The Arabidopsis gene MONOPTEROS encodes a transcription factor mediating embryo axis formation and vascular development.Q42451408
The Arabidopsis STV1 protein, responsible for translation reinitiation, is required for auxin-mediated gynoecium patterningQ42485356
'Evidence of an auxin signal pathway, microRNA167-ARF8-GH3, and its response to exogenous auxin in cultured rice cells'.Q42930356
Functional genomic analysis of the AUXIN RESPONSE FACTOR gene family members in Arabidopsis thaliana: unique and overlapping functions of ARF7 and ARF19.Q43817620
Auxin distribution and transport during embryogenesis and seed germination of ArabidopsisQ43852165
Auxin and light control of adventitious rooting in Arabidopsis require ARGONAUTE1.Q46437075
AUXIN RESPONSE FACTOR7 restores the expression of auxin-responsive genes in mutant Arabidopsis leaf mesophyll protoplastsQ46516529
IAA17/AXR3: biochemical insight into an auxin mutant phenotypeQ46548596
NPH4/ARF7 and ARF19 promote leaf expansion and auxin-induced lateral root formation.Q46550526
A genomic and expression compendium of the expanded PEBP gene family from maizeQ46907196
The AUXIN RESPONSE FACTOR 2 gene of Arabidopsis links auxin signalling, cell division, and the size of seeds and other organsQ47358236
Dimerization and DNA binding of auxin response factorsQ47931239
Rapid induction by wounding and bacterial infection of an S gene family receptor-like kinase gene in Brassica oleracea.Q48056242
Analysis of the promoter of the auxin-inducible gene, parC, of tobaccoQ48059257
OsARF1, an auxin response factor from rice, is auxin-regulated and classifies as a primary auxin responsive geneQ48279290
Disruption and overexpression of auxin response factor 8 gene of Arabidopsis affect hypocotyl elongation and root growth habit, indicating its possible involvement in auxin homeostasis in light condition.Q50487942
Overlapping and non-redundant functions of the Arabidopsis auxin response factors MONOPTEROS and NONPHOTOTROPIC HYPOCOTYL 4.Q51028909
Arabidopsis microRNA167 controls patterns of ARF6 and ARF8 expression, and regulates both female and male reproduction.Q51782192
Antisense phenotypes reveal a functional expression of OsARF1, an auxin response factor, in transgenic rice.Q51839516
AUXIN RESPONSE FACTOR8 is a negative regulator of fruit initiation in Arabidopsis.Q52012899
P407language of work or nameEnglishQ1860
P304page(s)178
P577publication date2011-04-07
P1433published inBMC GenomicsQ15765854
P1476titleGenome-wide identification and expression profiling of auxin response factor (ARF) gene family in maize
P478volume12

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cites work (P2860)
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