Core gene set as the basis of multilocus sequence analysis of the subclass Actinobacteridae

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Core gene set as the basis of multilocus sequence analysis of the subclass Actinobacteridae is …
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P819ADS bibcode2011PLoSO...614792A
P356DOI10.1371/JOURNAL.PONE.0014792
P932PMC publication ID3069002
P698PubMed publication ID21483493
P5875ResearchGate publication ID51042258

P50authorArthur L. DelcherQ64871666
Michel DrancourtQ59314790
P2093author name stringToïdi Adékambi
Thomas M Shinnick
Finnian Hanrahan
Ray W Butler
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Distinct types of rRNA operons exist in the genome of the actinomycete Thermomonospora chromogena and evidence for horizontal transfer of an entire rRNA operonQ24549229
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Is a new and general theory of molecular systematics emerging?Q29614319
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A minimal gene set for cellular life derived by comparison of complete bacterial genomesQ29616790
Prokaryotic evolution in light of gene transferQ29617350
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SVARAP and aSVARAP: simple tools for quantitative analysis of nucleotide and amino acid variability and primer selection for clinical microbiologyQ30810347
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How many genes can make a cell: the minimal-gene-set conceptQ31029180
Millisia brevis gen. nov., sp. nov., an actinomycete isolated from activated sludge foamQ31035819
Dissection of phylogenetic relationships among 19 rapidly growing Mycobacterium species by 16S rRNA, hsp65, sodA, recA and rpoB gene sequencingQ45315916
A multigene approach to phylogenetic analysis using the genus Mycobacterium as a modelQ45315984
Analysis of bifidobacterial evolution using a multilocus approachQ45316972
Complete rpoB gene sequencing as a suitable supplement to DNA-DNA hybridization for bacterial species and genus delineationQ45318705
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A molecular phylogeny of enteric bacteria and implications for a bacterial species conceptQ46174055
Comparative sequence analyses reveal frequent occurrence of short segments containing an abnormally high number of non-random base variations in bacterial rRNA genesQ47816603
Gram-positive bacteria with a high DNA G+C content are characterized by a common insertion within their 23S rRNA genesQ48171861
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Essential Genes Are More Evolutionarily Conserved Than Are Nonessential Genes in BacteriaQ56783033
Gene sequence phylogenies of the family microbacteriaceaeQ56898284
Arcanobacterium bialowiezense sp. nov. and Arcanobacterium bonasi sp. nov., isolated from the prepuce of European bison bulls (Bison bonasus) suffering from balanoposthitis, and emended description of the genus Arcanobacterium Collins et al. 1983.Q31035890
Isolates of 'Candidatus Nostocoida limicola' Blackall et al. 2000 should be described as three novel species of the genus Tetrasphaera, as Tetrasphaera jenkinsii sp. nov., Tetrasphaera vanveenii sp. nov. and Tetrasphaera veronensis sp. nov.Q31063369
Blastococcus jejuensis sp. nov., an actinomycete from beach sediment, and emended description of the genus Blastococcus Ahrens and Moll 1970.Q31063504
Mycobacterium barrassiae sp. nov., a Mycobacterium moriokaense group species associated with chronic pneumoniaQ31064496
Essential genes are more evolutionarily conserved than are nonessential genes in bacteriaQ31066425
Comparative genomics, minimal gene-sets and the last universal common ancestorQ33199916
Novel mycolic acid-containing bacteria in the family Segniliparaceae fam. nov., including the genus Segniliparus gen. nov., with descriptions of Segniliparus rotundus sp. nov. and Segniliparus rugosus sp. nov.Q33218875
Genomic insights that advance the species definition for prokaryotesQ33850939
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Intragenomic heterogeneity and intergenomic recombination among haloarchaeal rRNA genes.Q34324308
Genome-wide molecular clock and horizontal gene transfer in bacterial evolutionQ34349262
Horizontal gene transfer, genome innovation and evolutionQ34447824
Conserved indels in protein sequences that are characteristic of the phylum ActinobacteriaQ34466468
Signature proteins that are distinctive characteristics of Actinobacteria and their subgroupsQ34521322
The phylogenetic significance of peptidoglycan types: Molecular analysis of the genera Microbacterium and Aureobacterium based upon sequence comparison of gyrB, rpoB, recA and ppk and 16SrRNA genesQ34523482
Bacterial pathogenomicsQ34702436
A multilocus phylogeny of the Streptomyces griseus 16S rRNA gene clade: use of multilocus sequence analysis for streptomycete systematicsQ34733198
Insights from the complete genome sequence of Mycobacterium marinum on the evolution of Mycobacterium tuberculosisQ34769170
Determination of the core of a minimal bacterial gene setQ35880926
The evolution of supertrees.Q36479165
Two different 16S rRNA genes in a mycobacterial strainQ36540306
The molecular phylogeny and systematics of the actinomycetesQ36677230
Dietzia, a new genus including Dietzia maris comb. nov., formerly Rhodococcus marisQ36716060
The rpoB gene as a tool for clinical microbiologistsQ37350492
Divergence and redundancy of 16S rRNA sequences in genomes with multiple rrn operons.Q37424795
Two distinct mechanisms cause heterogeneity of 16S rRNA.Q39547112
rpoB-based identification of nonpigmented and late-pigmenting rapidly growing mycobacteriaQ40404155
Transfer of Catellatospora koreensis Lee et al. 2000 as Catelliglobosispora koreensis gen. nov., comb. nov. and Catellatospora tsunoense Asano et al. 1989 as Hamadaea tsunoensis gen. nov., comb. nov., and emended description of the genus CatellatospQ44023392
A seven-gene, multilocus, genus-wide approach to the phylogeny of mycobacteria using supertreesQ44957916
Phylogenetic Analysis of Acinetobacter Strains Based on the Nucleotide Sequences of gyrB Genes and on the Amino Acid Sequences of Their ProductsQ45312642
A Proposal To Reclassify Nocardia pinensis Blackall et al. as Skermania piniformis gen. nov., comb. nov.Q45312735
Proposal for a New Hierarchic Classification System, Actinobacteria classis nov.Q45312774
Gene sequences useful for predicting relatedness of whole genomes in bacteriaQ45315668
P275copyright licenseCreative Commons CC0 LicenseQ6938433
P6216copyright statuscopyrighted, dedicated to the public domain by copyright holderQ88088423
P4510describes a project that usesMUMmerQ6719063
P433issue3
P407language of work or nameEnglishQ1860
P304page(s)e14792
P577publication date2011-03-31
P1433published inPLOS OneQ564954
P1476titleCore gene set as the basis of multilocus sequence analysis of the subclass Actinobacteridae
P478volume6

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