Novel insights into the diversity of catabolic metabolism from ten haloarchaeal genomes (scientific article)

Structure and function of the universal stress protein TeaD and its role in regulating the ectoine transporter TeaABC of Halomonas elongata DSM 2581(T)

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Improved prediction of signal peptides: SignalP 3.0

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RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models

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OrthoMCL: Identification of Ortholog Groups for Eukaryotic Genomes

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A rapid bootstrap algorithm for the RAxML Web servers

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Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis

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The metabolism of D-galactose in Pseudomonas saccharophila

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Species delimitation in downy mildews: the case of Hyaloperonospora in the light of nuclear ribosomal ITS and LSU sequences

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Refuting phylogenetic relationships

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The ecology of the extremely halophilic archaea

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An improved general amino acid replacement matrix

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A phylogeny-driven genomic encyclopaedia of Bacteria and Archaea

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IMG ER: a system for microbial genome annotation expert review and curation

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RASCAL: rapid scanning and correction of multiple sequence alignments.

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Enhancement of cellulose saccharification kinetics using an ionic liquid pretreatment step.

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Cultivation of Walsby?s square haloarchaeon

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Halobacterium lacusprofundi sp. nov., a Halophilic Bacterium Isolated from Deep Lake, Antarctica

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A novel beta-N-acetylglucosaminidase from Streptomyces thermoviolaceus OPC-520: gene cloning, expression, and assignment to family 3 of the glycosyl hydrolases.

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Ketohexokinase (ATP:D-fructose 1-phosphotransferase) from a halophilic archaebacterium, Haloarcula vallismortis: purification and properties

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Microbial life at high salt concentrations: phylogenetic and metabolic diversity

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D-xylose degradation pathway in the halophilic archaeon Haloferax volcanii

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Organization of the genes involved in dimethylglycine and sarcosine degradation in Arthrobacter spp.: implications for glycine betaine catabolism

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Muropeptide rescue in Bacillus subtilis involves sequential hydrolysis by beta-N-acetylglucosaminidase and N-acetylmuramyl-L-alanine amidase

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Ion metabolism in a Halobacterium. I. Influence of age of culture on intracellular concentrations

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Isolation of haloarchaea that grow at low salinities.

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Halobacterium volcanii spec. nov., a Dead Sea halobacterium with a moderate salt requirement

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Promiscuity in the part-phosphorylative Entner-Doudoroff pathway of the archaeon Sulfolobus solfataricus

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The metabolism of carbohydrates by extremely halophilic bacteria: glucose metabolism via a modified Entner-Doudoroff pathway

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Dihydroxyacetone metabolism in Salinibacter ruber and in Haloquadratum walsbyi

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Identification and characterization of gshA, a gene encoding the glutamate-cysteine ligase in the halophilic archaeon Haloferax volcanii.

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A 2-oxoacid dehydrogenase complex of Haloferax volcanii is essential for growth on isoleucine but not on other branched-chain amino acids

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Different glycolytic pathways for glucose and fructose in the halophilic archaeon Halococcus saccharolyticus

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Production of beta-xylanase and beta-xylosidase by the extremely halophilic archaeon Halorhabdus utahensis

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The RhaS activator controls the Erwinia chrysanthemi 3937 genes rhiN, rhiT and rhiE involved in rhamnogalacturonan catabolism

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Concerted action of diacetylchitobiose deacetylase and exo-beta-D-glucosaminidase in a novel chitinolytic pathway in the hyperthermophilic archaeon Thermococcus kodakaraensis KOD1.

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The presence of a haloarchaeal type tyrosyl-tRNA synthetase marks the opisthokonts as monophyletic

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Maximum-likelihood estimation of phylogeny from DNA sequences when substitution rates differ over sites

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Haladaptatus paucihalophilus gen. nov., sp. nov., a halophilic archaeon isolated from a low-salt, sulfide-rich spring

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Haloquadratum walsbyi gen. nov., sp. nov., the square haloarchaeon of Walsby, isolated from saltern crystallizers in Australia and Spain

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Development of a spectral clustering method for the analysis of molecular data sets

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Halorhabdus utahensis gen. nov., sp. nov., an aerobic, extremely halophilic member of the Archaea from Great Salt Lake, Utah

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Haloarcula marismortui (Volcani) sp. nov., nom. rev., an extremely halophilic bacterium from the Dead Sea.

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Halogeometricum borinquense gen. nov., sp. nov., a novel halophilic archaeon from Puerto Rico

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Assessing the relative contribution of molecular and morphological characters in simultaneous analysis trees.

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Automated simultaneous analysis phylogenetics (ASAP): an enabling tool for phlyogenomics

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Environmental genomics reveals a single-species ecosystem deep within Earth

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Search for a 'Tree of Life' in the thicket of the phylogenetic forest

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A whole-genome phylogeny of the family Pasteurellaceae

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Cultivation of Walsby's square haloarchaeon

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The semi-phosphorylative Entner-Doudoroff pathway in hyperthermophilic archaea: a re-evaluation

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A methylaspartate cycle in haloarchaea

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Regulation of Escherichia coli K-12 hexuronate system genes: exu regulon

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Metabolism of halophilic archaea

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En route to a genome-based classification of Archaea and Bacteria?

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A model of horizontal gene transfer and the bacterial phylogeny problem

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The All-Species Living Tree project: a 16S rRNA-based phylogenetic tree of all sequenced type strains

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The bacterial universal stress protein: function and regulation

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gamma-Glutamylcysteine and thiosulfate are the major low-molecular-weight thiols in halobacteria

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Haloarcula argentinensis sp. nov. and Haloarcula mukohataei sp. nov., two new extremely halophilic archaea collected in Argentina

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Biosynthesis of ribose-5-phosphate and erythrose-4-phosphate in archaea: a phylogenetic analysis of archaeal genomes

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The structure, function, and biosynthesis of plant cell wall pectic polysaccharides

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A novel archaeal alanine dehydrogenase homologous to ornithine cyclodeaminase and mu-crystallin

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Glycosyltransferases and their Assays

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Methanococcus jannaschii uses a pyruvoyl-dependent arginine decarboxylase in polyamine biosynthesis

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P275

Creative Commons Attribution 4.0 International

copyrighted

issue

language of work or name

English

Q1860

P304

page(s)

e20237

P577

publication date

2011-05-25

P1433

published in

PLOS One

Q564954

P1476

title

Novel insights into the diversity of catabolic metabolism from ten haloarchaeal genomes

P478

volume

Reverse relations

cites work (P2860)

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Q37393616	Dihydroxyacetone metabolism in Haloferax volcanii
Q41760746	Fructose degradation in the haloarchaeon Haloferax volcanii involves a bacterial type phosphoenolpyruvate-dependent phosphotransferase system, fructose-1-phosphate kinase, and class II fructose-1,6-bisphosphate aldolase
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Q34137962	The core and unique proteins of haloarchaea

P819	ADS bibcode	2011PLoSO...620237A
P356	DOI	10.1371/JOURNAL.PONE.0020237
P932	PMC publication ID	3102087
P698	PubMed publication ID	21633497
P5875	ResearchGate publication ID	51184771