Gene discovery by genome-wide CDS re-prediction and microarray-based transcriptional analysis in phytopathogen Xanthomonas campestris

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Gene discovery by genome-wide CDS re-prediction and microarray-based transcriptional analysis in phytopathogen Xanthomonas campestris is …
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scholarly articleQ13442814

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P6179Dimensions Publication ID1051457368
P356DOI10.1186/1471-2164-12-359
P2888exact matchhttps://scigraph.springernature.com/pub.10.1186/1471-2164-12-359
P932PMC publication ID3142249
P698PubMed publication ID21745409
P5875ResearchGate publication ID51482903

P50authorAlfred PühlerQ1488595
Frank-Jörg VorhölterQ47007077
P2093author name stringLian Zhou
Frank-Jörg Vorhölter
Yuquan Xu
Bo-Le Jiang
Ji-Liang Tang
Yong-Qiang He
Ya-Wen He
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Comparative and functional genomic analyses of the pathogenicity of phytopathogen Xanthomonas campestris pv. campestrisQ22065748
Comparison of the genomes of two Xanthomonas pathogens with differing host specificitiesQ22122346
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Transcriptome analysis of Escherichia coli using high-density oligonucleotide probe arraysQ24537785
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Re-annotation of genome microbial coding-sequences: finding new genes and inaccurately annotated genesQ24803016
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The silencing protein SIR2 and its homologs are NAD-dependent protein deacetylasesQ27934108
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Mycobacterial cells have dual nickel-cobalt sensors: sequence relationships and metal sites of metal-responsive repressors are not congruentQ28486884
Xanthomonas campestris cell-cell communication involves a putative nucleotide receptor protein Clp and a hierarchical signalling networkQ28488500
Genome re-annotation: a wiki solution?Q28763015
GeneMarkS: a self-training method for prediction of gene starts in microbial genomes. Implications for finding sequence motifs in regulatory regionsQ29617560
A genome-wide survey of short coding sequences in streptococci.Q31134990
Re-annotation of the genome sequence of Mycobacterium tuberculosis H37RvQ34153293
Large-scale prokaryotic gene prediction and comparison to genome annotationQ34462831
The SmtB/ArsR family of metalloregulatory transcriptional repressors: Structural insights into prokaryotic metal resistanceQ35164001
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cobB function is required for catabolism of propionate in Salmonella typhimurium LT2: evidence for existence of a substitute function for CobB within the 1,2-propanediol utilization (pdu) operonQ39843701
A ‘PolyORFomic’ Analysis of Prokaryote Genomes Using Disabled-homology Filtering Reveals Conserved But Undiscovered Short ORFsQ42611918
The genome of Xanthomonas campestris pv. campestris B100 and its use for the reconstruction of metabolic pathways involved in xanthan biosynthesisQ46730215
Genome scale analysis of diffusible signal factor regulon in Xanthomonas campestris pv. campestris: identification of novel cell-cell communication-dependent genes and functionsQ46877401
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Co-regulation of Xanthomonas campestris virulence by quorum sensing and a novel two-component regulatory system RavS/RavR.Q51818597
Black Rot: A ContinuingQ56803725
REGANORQ57131402
New genes in old sequence: a strategy for finding genes in the bacterial genomeQ72754770
P407language of work or nameEnglishQ1860
P921main subjectXanthomonas campestrisQ3753551
P304page(s)359
P577publication date2011-07-12
P1433published inBMC GenomicsQ15765854
P1476titleGene discovery by genome-wide CDS re-prediction and microarray-based transcriptional analysis in phytopathogen Xanthomonas campestris
P478volume12

Reverse relations

cites work (P2860)
Q26822452Bacterial exopolysaccharides: biosynthesis pathways and engineering strategies
Q42287053Global Transcriptome Profiling of Xanthomonas oryzae pv. oryzae under in planta Growth and in vitro Culture Conditions.
Q51007291RNA-Seq facilitates a new perspective on signal transduction and gene regulation in important plant pathogens.
Q36939978Re-annotation of protein-coding genes in 10 complete genomes of Neisseriaceae family by combining similarity-based and composition-based methods
Q43436704Transcriptional reprogramming and phenotypical changes associated with growth of Xanthomonas campestris pv. campestris in cabbage xylem sap.

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