Evidence for short-range helical order in the 30-nm chromatin fibers of erythrocyte nuclei

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Evidence for short-range helical order in the 30-nm chromatin fibers of erythrocyte nuclei is …
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scholarly articleQ13442814

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P819ADS bibcode2011PNAS..10816992S
P356DOI10.1073/PNAS.1108268108
P8608Fatcat IDrelease_cpk3ekhf5vfrnchbljatbieglu
P932PMC publication ID3193215
P698PubMed publication ID21969536
P5875ResearchGate publication ID51691197

P50authorAchilleas S FrangakisQ41612950
P2093author name stringMikhail Eltsov
Margot P Scheffer
P2860cites workCrystal structure of the nucleosome core particle at 2.8 A resolutionQ22122355
Structure of the yeast nucleosome core particle reveals fundamental changes in internucleosome interactionsQ24535791
EM measurements define the dimensions of the "30-nm" chromatin fiber: evidence for a compact, interdigitated structureQ24542512
Solenoidal model for superstructure in chromatinQ24561840
Histone Octamer Helical Tubes Suggest that an Internucleosomal Four-Helix Bundle Stabilizes the Chromatin FiberQ27655008
Structure of RCC1 chromatin factor bound to the nucleosome core particleQ27664183
UCSF Chimera--a visualization system for exploratory research and analysisQ27860666
Opening of compacted chromatin by early developmental transcription factors HNF3 (FoxA) and GATA-4Q29618736
Analysis of cryo-electron microscopy images does not support the existence of 30-nm chromatin fibers in mitotic chromosomes in situQ30485080
Alignator: a GPU powered software package for robust fiducial-less alignment of cryo tilt-seriesQ33527683
In vivo chromatin organization of mouse rod photoreceptors correlates with histone modificationsQ33603017
Classification of electron sub-tomograms with neural networks and its application to template-matching.Q33838947
Condensed chromatin domains in the mammalian nucleus are accessible to large macromoleculesQ34250385
Chromatin higher-order structure studied by neutron scattering and scanning transmission electron microscopyQ34362137
Nucleosome arrays reveal the two-start organization of the chromatin fiberQ34371762
Identification of macromolecular complexes in cryoelectron tomograms of phantom cellsQ34392410
X-ray structure of a tetranucleosome and its implications for the chromatin fibreQ34431881
Histories H1 and H5: one or two molecules per nucleosome?Q35745519
The three-dimensional architecture of chromatin in situ: electron tomography reveals fibers composed of a continuously variable zig-zag nucleosomal ribbonQ36234105
Chromatin fibers observed in situ in frozen hydrated sections. Native fiber diameter is not correlated with nucleosome repeat lengthQ36234129
Chromatin conformation and salt-induced compaction: three-dimensional structural information from cryoelectron microscopyQ36236348
Formation of facultative heterochromatin in the absence of HP1Q36266629
The higher-order structure of chromatin: evidence for a helical ribbon arrangementQ36510381
Higher-order structures of chromatin: the elusive 30 nm fiberQ36744470
The potential of cryofixation and freeze substitution: observations and theoretical considerations.Q37336112
Hydrodynamic studies on defined heterochromatin fragments support a 30-nm fiber having six nucleosomes per turnQ37413887
Pattern of chick gene activation in chick erythrocyte heterokaryonsQ41443590
Packing of a specific gene into higher order structures following repression of RNA synthesisQ41458504
Classification of cryo-electron sub-tomograms using constrained correlationQ41624185
Chromatin structure of the chicken beta-globin gene region. Sensitivity to DNase I, micrococcal nuclease, and DNase II.Q48922259
STUDIES ON CHROMATIN. I. ISOLATION AND CHARACTERIZATION OF NUCLEAR COMPLEXES OF DEOXYRIBONUCLEIC ACID, RIBONUCLEIC ACID, AND PROTEIN FROM EMBRYONIC AND ADULT TISSUES OF THE CHICKENQ51269384
A visualization and segmentation toolbox for electron microscopyQ58022768
The higher order structure of chicken erythrocyte chromosomes in vivoQ59050017
Higher order structure of chromatin: orientation of nucleosomes within the 30 nm chromatin solenoid is independent of species and spacer lengthQ71789059
RNA and protein metabolism in the maturation of the nucleated chicken erythrocyteQ76460296
P433issue41
P407language of work or nameEnglishQ1860
P304page(s)16992-16997
P577publication date2011-10-03
P1433published inProceedings of the National Academy of Sciences of the United States of AmericaQ1146531
P1476titleEvidence for short-range helical order in the 30-nm chromatin fibers of erythrocyte nuclei
P478volume108

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cites work (P2860)
Q930030483D organization of chicken genome demonstrates evolutionary conservation of topologically associated domains and highlights unique architecture of erythrocytes' chromatin
Q27343084A metastable structure for the compact 30-nm chromatin fibre
Q36603039Analysis of chromatin fibers in Hela cells with electron tomography
Q50879281Antipolar and Anticlinic Mesophase Order in Chromatin Induced by Nucleosome Polarity and Chirality Correlations.
Q33364665Binding of DNA-bending non-histone proteins destabilizes regular 30-nm chromatin structure
Q30832476Budding yeast chromatin is dispersed in a crowded nucleoplasm in vivo.
Q37621249CENP-A arrays are more condensed than canonical arrays at low ionic strength
Q42198538Changing chromatin fiber conformation by nucleosome repositioning
Q64982473Characterizing the nuclease accessibility of DNA in human cells to map higher order structures of chromatin.
Q45235642ChromEMT: Visualizing 3D chromatin structure and compaction in interphase and mitotic cells
Q33651467Chromatin as dynamic 10-nm fibers
Q33730652Chromatin fiber polymorphism triggered by variations of DNA linker lengths
Q64062869Chromatin fiber structural motifs as regulatory hubs of genome function?
Q38939491Chromatin fibers: from classical descriptions to modern interpretation
Q37182747Chromatin in a marine picoeukaryote is a disordered assemblage of nucleosomes
Q37991047Chromatin organization - the 30 nm fiber
Q36729373Chromatin organization and transcriptional regulation
Q36570241Chromatin structure outside and inside the nucleus
Q41607617Chromatin structure revealed by X-ray scattering analysis and computational modeling
Q34640698Chromosomes without a 30-nm chromatin fiber
Q36061475Contribution of cryoelectron microscopy of vitreous sections to the understanding of biological membrane structure
Q39336426Coupling between chromosome intermingling and gene regulation during cellular differentiation
Q39350728Cryo-electron microscopy of chromatin biology.
Q39305253DNA of a circular minichromosome linearized by restriction enzymes or other reagents is resistant to further cleavage: an influence of chromatin topology on the accessibility of DNA.
Q42719874Dynamic condensation of linker histone C-terminal domain regulates chromatin structure.
Q41609075ELCS in ice: cryo-electron microscopy of nuclear envelope-limited chromatin sheets
Q47668891Emerging roles of linker histones in regulating chromatin structure and function
Q27318183Hierarchical looping of zigzag nucleosome chains in metaphase chromosomes
Q37307109Histone acetylation dependent energy landscapes in tri-nucleosome revealed by residue-resolved molecular simulations
Q30512823Human mitotic chromosomes consist predominantly of irregularly folded nucleosome fibres without a 30-nm chromatin structure
Q33565190Insights into chromatin structure and dynamics in plants
Q51840143Is chromatin helical?
Q37654911Limiting factors in single particle cryo electron tomography.
Q57646828Local order and conformation of nucleosomes in solution and in interphase nuclei analysed by cryo-electron microscopy of vitreous sections
Q92897879Modelling and DNA topology of compact 2-start and 1-start chromatin fibres
Q34807927Modulation of Higher Order Chromatin Conformation in Mammalian Cell Nuclei Can Be Mediated by Polyamines and Divalent Cations
Q58010952Natural chromatin is heterogeneous and self-associates in vitro
Q99594461Near-atomic resolution structures of interdigitated nucleosome fibres
Q57646815Nucleosome conformational variability in solution and in interphase nuclei evidenced by cryo-electron microscopy of vitreous sections
Q36224212On the topology of chromatin fibres.
Q30952722Restraint-based three-dimensional modeling of genomes and genomic domains
Q89360907Revisit of Reconstituted 30-nm Nucleosome Arrays Reveals an Ensemble of Dynamic Structures
Q34637040Revisiting higher-order and large-scale chromatin organization
Q58122884Rigid Basepair Monte Carlo Simulations of One-Start and Two-Start Chromatin Fiber Unfolding by Force
Q28080958Structure and organization of chromatin fiber in the nucleus
Q41993462Structure-driven homology pairing of chromatin fibers: the role of electrostatics and protein-induced bridging.
Q37663656Super-resolution microscopy reveals decondensed chromatin structure at transcription sites
Q46916629Synthesis and characterization of multi-helical DNA-silica fibers
Q92527745The Biochemistry and Evolution of the Dinoflagellate Nucleus
Q38744669The Emerging Role of the Cytoskeleton in Chromosome Dynamics
Q35768249The chromatin fiber: multiscale problems and approaches
Q88621753The genome-seeing it clearly now
Q39310951The regulatory role of DNA supercoiling in nucleoprotein complex assembly and genetic activity.
Q38261296The shades of gray of the chromatin fiber: recent literature provides new insights into the structure of chromatin
Q41091528Three-dimensional positioning and structure of chromosomes in a human prophase nucleus
Q33914834Torque measurement at the single-molecule level
Q38427027Unraveling the 3D genome: genomics tools for multiscale exploration
Q33926267Variable chromatin structure revealed by in situ spatially correlated DNA cleavage mapping
Q89984164Visualizing the genome in high resolution challenges our textbook understanding

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