scholarly article | Q13442814 |
P8978 | DBLP publication ID | journals/nar/BiXHTWHJDRO12 |
P356 | DOI | 10.1093/NAR/GKR846 |
P932 | PMC publication ID | 3244999 |
P698 | PubMed publication ID | 22009673 |
P5875 | ResearchGate publication ID | 51727429 |
P50 | author | Hong-Yu Ou | Q58134583 |
Ewan M. Harrison | Q42340025 | ||
P2093 | author name string | Cui Tai | |
Dexi Bi | |||
Kumar Rajakumar | |||
Xinyi He | |||
Zixin Deng | |||
Zhen Xu | |||
Shiru Jia | |||
Yiqing Wei | |||
P2860 | cites work | ISfinder: the reference centre for bacterial insertion sequences | Q24538230 |
HMMER web server: interactive sequence similarity searching | Q24603071 | ||
TADB: a web-based resource for Type 2 toxin-antitoxin loci in bacteria and archaea | Q24608697 | ||
MUSCLE: multiple sequence alignment with high accuracy and high throughput | Q24613456 | ||
ACLAME: a CLAssification of Mobile genetic Elements, update 2010 | Q24644500 | ||
Jalview Version 2--a multiple sequence alignment editor and analysis workbench | Q24655519 | ||
WebACT--an online companion for the Artemis Comparison Tool | Q57518126 | ||
The generic genome browser: a building block for a model organism system database | Q24682395 | ||
Regulation of transfer functions by the imp locus of the Streptomyces coelicolor plasmidogenic element SLP1 | Q30778972 | ||
Novel Tn4371-ICE like element in Ralstonia pickettii and genome mining for comparative elements | Q30920788 | ||
Cleavage of phosphorothioated DNA and methylated DNA by the type IV restriction endonuclease ScoMcrA. | Q30993972 | ||
Circular genome visualization and exploration using CGView | Q31120465 | ||
A toxin-antitoxin system promotes the maintenance of an integrative conjugative element | Q33422974 | ||
Integrative and sequence characteristics of a novel genetic element, ICE6013, in Staphylococcus aureus | Q33489278 | ||
Comparative ICE genomics: insights into the evolution of the SXT/R391 family of ICEs | Q33521306 | ||
Pathogenicity islands PAPI-1 and PAPI-2 contribute individually and synergistically to the virulence of Pseudomonas aeruginosa strain PA14 | Q33769060 | ||
The repertoire of ICE in prokaryotes underscores the unity, diversity, and ubiquity of conjugation | Q34005318 | ||
Shaping bacterial genomes with integrative and conjugative elements | Q34327965 | ||
Conjugative transposons: the tip of the iceberg. | Q34985996 | ||
Self-transmissibility of the integrative and conjugative element ICEPm1 between clinical isolates requires a functional integrase, relaxase, and type IV secretion system | Q35139562 | ||
The current ICE age: biology and evolution of SXT-related integrating conjugative elements. | Q36418823 | ||
VFDB 2008 release: an enhanced web-based resource for comparative pathogenomics | Q36454089 | ||
Actinomycete integrative and conjugative elements | Q37181824 | ||
A modular master on the move: the Tn916 family of mobile genetic elements. | Q37493047 | ||
Integrative and conjugative elements: mosaic mobile genetic elements enabling dynamic lateral gene flow. | Q37770056 | ||
ARDB--Antibiotic Resistance Genes Database | Q38512415 | ||
Int-B13, an unusual site-specific recombinase of the bacteriophage P4 integrase family, is responsible for chromosomal insertion of the 105-kilobase clc element of Pseudomonas sp. Strain B13. | Q39568257 | ||
Towards pathogenomics: a web-based resource for pathogenicity islands | Q40104137 | ||
Autonomous plasmid-like replication of a conjugative transposon | Q41899135 | ||
The ICESt1 element of Streptococcus thermophilus belongs to a large family of integrative and conjugative elements that exchange modules and change their specificity of integration | Q42685814 | ||
The role of Bacteroides conjugative transposons in the dissemination of antibiotic resistance genes | Q44303071 | ||
Genomic islands are dynamic, ancient integrative elements in bacterial evolution. | Q47623825 | ||
P275 | copyright license | Creative Commons Attribution-NonCommercial 3.0 Unported | Q18810331 |
P6216 | copyright status | copyrighted | Q50423863 |
P433 | issue | Database issue | |
P407 | language of work or name | English | Q1860 |
P304 | page(s) | D621-6 | |
P577 | publication date | 2011-10-18 | |
P1433 | published in | Nucleic Acids Research | Q135122 |
P1476 | title | ICEberg: a web-based resource for integrative and conjugative elements found in Bacteria | |
P478 | volume | 40 |
Q39382890 | A Clostridium difficile Lineage Endemic to Costa Rican Hospitals Is Multidrug Resistant by Acquisition of Chromosomal Mutations and Novel Mobile Genetic Elements |
Q92328923 | A Novel Arsenate-Resistant Determinant Associated with ICEpMERPH, a Member of the SXT/R391 Group of Mobile Genetic Elements |
Q49577359 | A Practical Guide for Comparative Genomics of Mobile Genetic Elements in Prokaryotic Genomes |
Q89995978 | A Yersinia ruckeri TIR Domain-Containing Protein (STIR-2) Mediates Immune Evasion by Targeting the MyD88 Adaptor |
Q34550815 | A conserved helicase processivity factor is needed for conjugation and replication of an integrative and conjugative element |
Q33583717 | A locus encoding variable defence systems against invading DNA identified in Streptococcus suis |
Q52639531 | A novel Glaesserella sp. isolated from severe respiratory infections in pigs has a mosaic genome with virulence factors putatively acquired by horizontal transfer. |
Q91043179 | A novel integrative conjugative element mediates transfer of multi-drug resistance between Streptococcus suis strains of different serotypes |
Q41447052 | Analysis and comparative genomics of R997, the first SXT/R391 integrative and conjugative element (ICE) of the Indian Sub-Continent. |
Q57300031 | Antibiotics, Resistome and Resistance Mechanisms: A Bacterial Perspective |
Q90308635 | Antimicrobial Resistance in Veterinary Medicine: An Overview |
Q28822597 | Assembly and transfer of tripartite integrative and conjugative genetic elements |
Q37425423 | Autonomous Replication of the Conjugative Transposon Tn916. |
Q38185470 | Bacterial insertion sequences: their genomic impact and diversity |
Q33742506 | CRISPR-Cas systems target a diverse collection of invasive mobile genetic elements in human microbiomes |
Q36644663 | Characterization of SXT/R391 Integrative and Conjugative Elements in Proteus mirabilis Isolates from Food-Producing Animals in China |
Q39117521 | Characterization of Three Novel SXT/R391 Integrating Conjugative Elements ICEMfuInd1a and ICEMfuInd1b, and ICEMprChn1 Identified in the Genomes of Marinomonas fungiae JCM 18476T and Marinomonas profundimaris Strain D104 |
Q89391680 | Characterization of a Novel SXT/R391 Integrative and Conjugative Element Carrying cfr, blaCTX-M-65, fosA3, and aac(6')-Ib-cr in Proteus mirabilis |
Q41789013 | Characterization of a Streptococcus suis tet(O/W/32/O)-carrying element transferable to major streptococcal pathogens. |
Q91361857 | Characterization of antibiotic resistance genes in the species of the rumen microbiota |
Q46286650 | Characterization of the Actinobacillus pleuropneumoniae SXT-related integrative and conjugative element ICEApl2 and analysis of the encoded FloR protein: hydrophobic residues in transmembrane domains contribute dynamically to florfenicol and chloram |
Q34135922 | Characterization of the core and accessory genomes of Pseudomonas aeruginosa using bioinformatic tools Spine and AGEnt |
Q36527283 | Comparative Genomic Analysis of the ICESa2603 Family ICEs and Spread of erm(B)- and tet(O)-Carrying Transferable 89K-Subtype ICEs in Swine and Bovine Isolates in China |
Q36882221 | Comparative Genomics of Carriage and Disease Isolates of Streptococcus pneumoniae Serotype 22F Reveals Lineage-Specific Divergence and Niche Adaptation |
Q47145757 | Comparative genomic analysis of Brevibacterium strains: insights into key genetic determinants involved in adaptation to the cheese habitat |
Q55100890 | Comparative genomic analysis of a naturally competent Elizabethkingia anophelis isolated from an eye infection. |
Q36008494 | Comparative genomic analysis of six new-found integrative conjugative elements (ICEs) in Vibrio alginolyticus |
Q28821398 | Comparative genomics of Clostridium bolteae and Clostridium clostridioforme reveals species-specific genomic properties and numerous putative antibiotic resistance determinants |
Q36300004 | Comparative genomics of Enterococcus spp. isolated from bovine feces |
Q92928218 | Comparative genomics of multidrug-resistant Enterococcus spp. isolated from wastewater treatment plants |
Q42290889 | Complete Genome Sequence of the Streptococcus gallolyticus subsp. gallolyticus Strain DSM 16831. |
Q35225636 | Complete genome sequence and analysis of Lactobacillus hokkaidonensis LOOC260(T), a psychrotrophic lactic acid bacterium isolated from silage |
Q35826708 | Complete genome sequence of Klebsiella pneumoniae subsp. pneumoniae HS11286, a multidrug-resistant strain isolated from human sputum. |
Q35101971 | Complete genome sequence of Ornithobacterium rhinotracheale strain ORT-UMN 88 |
Q91917473 | Comprehensive analysis of chromosomal mobile genetic elements in the gut microbiome reveals phylum-level niche-adaptive gene pools |
Q26746938 | Computational methods for predicting genomic islands in microbial genomes |
Q64101688 | Cumulative acquisition of pathogenicity islands has shaped virulence potential and contributed to the emergence of LEE-negative Shiga toxin-producing Escherichia coli strains |
Q34477985 | Databases for Microbiologists |
Q55003576 | Distribution and Genetic Characteristics of SXT/R391 Integrative Conjugative Elements in Shewanella spp. From China. |
Q95360794 | Draft genome sequence of a uropathogenic Escherichia coli isolate (ST38 O1:H15) from Pakistan, an emerging multidrug-resistant sequence type with a high virulence profile |
Q91951403 | Emerging coexistence of three PMQR genes on a multiple resistance plasmid with a new surrounding genetic structure of qnrS2 in E. coli in China |
Q37318052 | Evolution and Diversity of the Antimicrobial Resistance Associated Mobilome in Streptococcus suis: A Probable Mobile Genetic Elements Reservoir for Other Streptococci |
Q89918152 | Exploring the resistome, virulome and microbiome of drinking water in environmental and clinical settings |
Q64094445 | First Report of Integrative Conjugative Elements in Isolates From Ducks in China |
Q34637800 | Functional validation of putative toxin-antitoxin genes from the Gram-positive pathogen Streptococcus pneumoniae: phd-doc is the fourth bona-fide operon |
Q41717319 | Genome characterization of two bile-isolated Vibrio fluvialis strains: an insight into pathogenicity and bile salt adaption |
Q36826411 | Genome sequencing and analysis of the first complete genome of Lactobacillus kunkeei strain MP2, an Apis mellifera gut isolate |
Q37172465 | Genomic Analysis Reveals Multi-Drug Resistance Clusters in Group B Streptococcus CC17 Hypervirulent Isolates Causing Neonatal Invasive Disease in Southern Mainland China |
Q35915195 | Genomic analysis of the nitrate-respiring Sphingopyxis granuli (formerly Sphingomonas macrogoltabida) strain TFA. |
Q35105865 | Genomic insights into intrinsic and acquired drug resistance mechanisms in Achromobacter xylosoxidans |
Q38808071 | Genomics and the evolution of antibiotic resistance |
Q37178789 | Global phylogenomic analysis of nonencapsulated Streptococcus pneumoniae reveals a deep-branching classic lineage that is distinct from multiple sporadic lineages |
Q26779242 | Human microbiomes and their roles in dysbiosis, common diseases, and novel therapeutic approaches |
Q90288775 | ICEKp2: description of an integrative and conjugative element in Klebsiella pneumoniae, co-occurring and interacting with ICEKp1 |
Q42373421 | ICESag37, a Novel Integrative and Conjugative Element Carrying Antimicrobial Resistance Genes and Potential Virulence Factors in Streptococcus agalactiae |
Q37023286 | ICESpy009, a Conjugative Genetic Element Carrying mef(E) in Streptococcus pyogenes |
Q58587046 | ICEberg 2.0: an updated database of bacterial integrative and conjugative elements |
Q33565346 | Identification of Horizontally-transferred Genomic Islands and Genome Segmentation Points by Using the GC Profile Method |
Q41247891 | Identification of a Single Strand Origin of Replication in the Integrative and Conjugative Element ICEBs1 of Bacillus subtilis |
Q41512096 | In silico analysis of protein toxin and bacteriocins from Lactobacillus paracasei SD1 genome and available online databases |
Q55630193 | Integrative and Conjugative Elements (ICEs) in Pasteurellaceae Species and Their Detection by Multiplex PCR. |
Q37529766 | Integrative and Conjugative Elements (ICEs): What They Do and How They Work |
Q35692026 | Integrative conjugative elements of the ICEPan family play a potential role in Pantoea ananatis ecological diversification and antibiosis |
Q36011073 | MOCAT2: a metagenomic assembly, annotation and profiling framework |
Q88990080 | Microbial genomic island discovery, visualization and analysis |
Q38943970 | Mixed transmission modes and dynamic genome evolution in an obligate animal-bacterial symbiosis |
Q90697869 | Mobile Genetic Elements Associated with Antimicrobial Resistance |
Q64066680 | Mobile antibiotic resistome in wastewater treatment plants revealed by Nanopore metagenomic sequencing |
Q97644491 | Mobilization of Antibiotic Resistance: Are Current Approaches for Colocalizing Resistomes and Mobilomes Useful? |
Q64100600 | Nasal Resistome Development in Infants With Cystic Fibrosis in the First Year of Life |
Q36240751 | Networking in microbes: conjugative elements and plasmids in the genus Alteromonas |
Q36432032 | New Insights into the Classification and Integration Specificity of Streptococcus Integrative Conjugative Elements through Extensive Genome Exploration |
Q64066992 | Non-contiguous finished genome sequencing and description of sp. nov. isolated from human sputum |
Q47139602 | Novel large-scale chromosomal transfer in Bacteroides fragilis contributes to its pan-genome and rapid environmental adaptation. |
Q41908551 | Pathogens of bovine respiratory disease in North American feedlots conferring multidrug resistance via integrative conjugative elements. |
Q97905249 | Potential evolutionary impact of integrative and conjugative elements (ICEs) and genomic islands in the Ralstonia solanacearum species complex |
Q58761407 | Pull in and Push Out: Mechanisms of Horizontal Gene Transfer in Bacteria |
Q40984979 | Recombination between Streptococcus suis ICESsu32457 and Streptococcus agalactiae ICESa2603 yields a hybrid ICE transferable to Streptococcus pyogenes |
Q58758056 | Role of plasmid plasticity and mobile genetic elements in the entomopathogen Bacillus thuringiensis serovar israelensis |
Q26745983 | SXT/R391 Integrative and Conjugative Elements (ICEs) Encode a Novel 'Trap-Door' Strategy for Mobile Element Escape |
Q37444320 | SXT/R391 integrative and conjugative elements in Proteus species reveal abundant genetic diversity and multidrug resistance |
Q34495229 | SecReT4: a web-based bacterial type IV secretion system resource |
Q38680504 | Serotype-specific role of antigen I/II in the initial steps of the pathogenesis of the infection caused by Streptococcus suis |
Q42190290 | The Bacillus subtilis conjugative transposon ICEBs1 mobilizes plasmids lacking dedicated mobilization functions |
Q34593363 | The TetR-type MfsR protein of the integrative and conjugative element (ICE) ICEclc controls both a putative efflux system and initiation of ICE transfer. |
Q92495609 | The antibiotic resistance and pathogenicity of a multidrug-resistant Elizabethkingia anophelis isolate |
Q26782828 | The extended regulatory networks of SXT/R391 integrative and conjugative elements and IncA/C conjugative plasmids |
Q34444697 | The genome of the intracellular bacterium of the coastal bivalve, Solemya velum: a blueprint for thriving in and out of symbiosis |
Q38859993 | The hidden life of integrative and conjugative elements |
Q35866984 | The phn Island: A New Genomic Island Encoding Catabolism of Polynuclear Aromatic Hydrocarbons |
Q35533744 | The use of genome wide association methods to investigate pathogenicity, population structure and serovar in Haemophilus parasuis |
Q52351418 | Transposase-DNA Complex Structures Reveal Mechanisms for Conjugative Transposition of Antibiotic Resistance. |
Q92661641 | Urbanization and Waterborne Pathogen Emergence in Low-Income Countries: Where and How to Conduct Surveys? |
Q38376421 | VRprofile: gene-cluster-detection-based profiling of virulence and antibiotic resistance traits encoded within genome sequences of pathogenic bacteria. |
Q47653532 | Whole-genome analysis reveals the evolution and transmission of an MDR DH/NAP11/106 Clostridium difficile clone in a paediatric hospital. |
Q40758595 | Whole-genome typing and characterization of blaVIM19-harbouring ST383 Klebsiella pneumoniae by PFGE, whole-genome mapping and WGS. |
Q33675315 | Zisland Explorer: detect genomic islands by combining homogeneity and heterogeneity properties. |
Search more.