ICEberg: a web-based resource for integrative and conjugative elements found in Bacteria

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ICEberg: a web-based resource for integrative and conjugative elements found in Bacteria is …
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scholarly articleQ13442814

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P8978DBLP publication IDjournals/nar/BiXHTWHJDRO12
P356DOI10.1093/NAR/GKR846
P932PMC publication ID3244999
P698PubMed publication ID22009673
P5875ResearchGate publication ID51727429

P50authorHong-Yu OuQ58134583
Ewan M. HarrisonQ42340025
P2093author name stringCui Tai
Dexi Bi
Kumar Rajakumar
Xinyi He
Zixin Deng
Zhen Xu
Shiru Jia
Yiqing Wei
P2860cites workISfinder: the reference centre for bacterial insertion sequencesQ24538230
HMMER web server: interactive sequence similarity searchingQ24603071
TADB: a web-based resource for Type 2 toxin-antitoxin loci in bacteria and archaeaQ24608697
MUSCLE: multiple sequence alignment with high accuracy and high throughputQ24613456
ACLAME: a CLAssification of Mobile genetic Elements, update 2010Q24644500
Jalview Version 2--a multiple sequence alignment editor and analysis workbenchQ24655519
WebACT--an online companion for the Artemis Comparison ToolQ57518126
The generic genome browser: a building block for a model organism system databaseQ24682395
Regulation of transfer functions by the imp locus of the Streptomyces coelicolor plasmidogenic element SLP1Q30778972
Novel Tn4371-ICE like element in Ralstonia pickettii and genome mining for comparative elementsQ30920788
Cleavage of phosphorothioated DNA and methylated DNA by the type IV restriction endonuclease ScoMcrA.Q30993972
Circular genome visualization and exploration using CGViewQ31120465
A toxin-antitoxin system promotes the maintenance of an integrative conjugative elementQ33422974
Integrative and sequence characteristics of a novel genetic element, ICE6013, in Staphylococcus aureusQ33489278
Comparative ICE genomics: insights into the evolution of the SXT/R391 family of ICEsQ33521306
Pathogenicity islands PAPI-1 and PAPI-2 contribute individually and synergistically to the virulence of Pseudomonas aeruginosa strain PA14Q33769060
The repertoire of ICE in prokaryotes underscores the unity, diversity, and ubiquity of conjugationQ34005318
Shaping bacterial genomes with integrative and conjugative elementsQ34327965
Conjugative transposons: the tip of the iceberg.Q34985996
Self-transmissibility of the integrative and conjugative element ICEPm1 between clinical isolates requires a functional integrase, relaxase, and type IV secretion systemQ35139562
The current ICE age: biology and evolution of SXT-related integrating conjugative elements.Q36418823
VFDB 2008 release: an enhanced web-based resource for comparative pathogenomicsQ36454089
Actinomycete integrative and conjugative elementsQ37181824
A modular master on the move: the Tn916 family of mobile genetic elements.Q37493047
Integrative and conjugative elements: mosaic mobile genetic elements enabling dynamic lateral gene flow.Q37770056
ARDB--Antibiotic Resistance Genes DatabaseQ38512415
Int-B13, an unusual site-specific recombinase of the bacteriophage P4 integrase family, is responsible for chromosomal insertion of the 105-kilobase clc element of Pseudomonas sp. Strain B13.Q39568257
Towards pathogenomics: a web-based resource for pathogenicity islandsQ40104137
Autonomous plasmid-like replication of a conjugative transposonQ41899135
The ICESt1 element of Streptococcus thermophilus belongs to a large family of integrative and conjugative elements that exchange modules and change their specificity of integrationQ42685814
The role of Bacteroides conjugative transposons in the dissemination of antibiotic resistance genesQ44303071
Genomic islands are dynamic, ancient integrative elements in bacterial evolution.Q47623825
P275copyright licenseCreative Commons Attribution-NonCommercial 3.0 UnportedQ18810331
P6216copyright statuscopyrightedQ50423863
P433issueDatabase issue
P407language of work or nameEnglishQ1860
P304page(s)D621-6
P577publication date2011-10-18
P1433published inNucleic Acids ResearchQ135122
P1476titleICEberg: a web-based resource for integrative and conjugative elements found in Bacteria
P478volume40

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