NotI subtraction and NotI-specific microarrays to detect copy number and methylation changes in whole genomes

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NotI subtraction and NotI-specific microarrays to detect copy number and methylation changes in whole genomes is …
instance of (P31):
scholarly articleQ13442814

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P819ADS bibcode2002PNAS...9910724L
P356DOI10.1073/PNAS.132271699
P932PMC publication ID125025
P698PubMed publication ID12149436
P5875ResearchGate publication ID11234176

P50authorOlga MuravenkoQ28499937
P2093author name stringClaes Wahlestedt
Michael I Lerman
Alexei Protopopov
Eugene R Zabarovsky
Fuli Wang
Lev Kisselev
George Klein
Olga Vorontsova
Eleonora Braga
Ingemar Ernberg
Jingfeng Li
Vera Senchenko
Lev Petrenko
Olga Muravenko
Valentin Petushkov
Veronika Zabarovska
Vladimir Kashuba
P2860cites workSequence analysis of a 685-kb genomic region on chromosome 3p22-p21.3 that is homozygously deleted in a lung carcinoma cell lineQ24309163
Tumour class prediction and discovery by microarray-based DNA methylation analysisQ24514903
Minimum information about a microarray experiment (MIAME)-toward standards for microarray dataQ27860569
High resolution analysis of DNA copy number variation using comparative genomic hybridization to microarraysQ29615979
Analysis of NotI linking clones isolated from human chromosome 3 specific librariesQ30807334
NotI clones in the analysis of the human genomeQ30845066
Aberrant CpG-island methylation has non-random and tumour-type-specific patterns.Q33888431
Genetic and epigenetic alterations in carcinogenesis.Q33892866
Construction of a human chromosome 3 specific NotI linking library using a novel cloning procedure.Q34205635
DNA methylation, chromatin inheritance, and cancerQ34290318
Cloning the differences between two complex genomesQ34360785
Detecting gene copy number fluctuations in tumor cells by microarray analysis of genomic representationsQ35029018
"RFLP subtraction": a method for making libraries of polymorphic markersQ35554318
Establishment of methylation-sensitive-representational difference analysis and isolation of hypo- and hypermethylated genomic fragments in mouse liver tumorsQ36036502
Manufacturing DNA microarrays of high spot homogeneity and reduced background signalQ38302956
Enzymatic Regional Methylation Assay: A Novel Method to Quantify Regional CpG Methylation DensityQ39753460
Dissecting complex epigenetic alterations in breast cancer using CpG island microarraysQ51602472
Rapid mapping of NotI linking clones with differential hybridization and Alu-PCRQ72802925
Predicting lung cancer by detecting aberrant promoter methylation in sputumQ73208076
Loss-of-heterozygosity analysis of small-cell lung carcinomas using single-nucleotide polymorphism arraysQ74268267
Cloning of deleted sequences (CODE): A genomic subtraction method for enriching and cloning deleted sequencesQ77073802
Gene dosage by quantitative real-time PCRQ78159554
P433issue16
P407language of work or nameEnglishQ1860
P304page(s)10724-10729
P577publication date2002-07-29
P1433published inProceedings of the National Academy of Sciences of the United States of AmericaQ1146531
P1476titleNotI subtraction and NotI-specific microarrays to detect copy number and methylation changes in whole genomes
P478volume99

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cites work (P2860)
Q34442670Alterations of the WNT7A Gene in Clear Cell Renal Cell Carcinomas
Q39509406Anti-angiogenic and tumor-suppressive roles of candidate tumor-suppressor gene, Fibulin-2, in nasopharyngeal carcinoma.
Q85388556Application of a NotI subtraction and methylation-specific genome subtractive hybridization technique in the detection of genomic DNA methylation differences between hydatidiform moles and villi
Q36844969Colorectal cancer epigenetics: the role of environmental factors and the search for molecular biomarkers
Q33745551Epigenetic alterations of chromosome 3 revealed by NotI-microarrays in clear cell renal cell carcinoma.
Q54699191Estimating the copy number of transgenes in transformed rice by real-time quantitative PCR.
Q39366723Genetic and epigenetic analysis of non-small cell lung cancer with NotI-microarrays.
Q24336517HYAL1 and HYAL2 inhibit tumour growth in vivo but not in vitro
Q33455585High mutability of the tumor suppressor genes RASSF1 and RBSP3 (CTDSPL) in cancer
Q36150385Identification of Novel Epigenetic Markers of Prostate Cancer by NotI-Microarray Analysis
Q34804988Increase of faecal tryptic activity relates to changes in the intestinal microbiome: analysis of Crohn's disease with a multidisciplinary platform
Q36544611Integrin α9 gene promoter is hypermethylated and downregulated in nasopharyngeal carcinoma.
Q25257367Microarray-based DNA methylation profiling: technology and applications
Q36396570NotI microarrays: novel epigenetic markers for early detection and prognosis of high grade serous ovarian cancer
Q39698088NotI passporting to identify species composition of complex microbial systems
Q36906172Novel tumor suppressor candidates on chromosome 3 revealed by NotI-microarrays in cervical cancer
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Q28188233The power and the promise of DNA methylation markers
Q34935968Tumor suppressor genes on chromosome 3p involved in the pathogenesis of lung and other cancers

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