rpoD gene pyrosequencing for the assessment of Pseudomonas diversity in a water sample from the Woluwe River

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rpoD gene pyrosequencing for the assessment of Pseudomonas diversity in a water sample from the Woluwe River is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.1128/AEM.00412-14
P932PMC publication ID4148809
P698PubMed publication ID24858084

P50authorMargarita GomilaQ40136232
Elena García-ValdésQ41173209
Jorge LalucatQ41173217
P2093author name stringCatherine Tricot
David Sánchez
Sandra Matthijs
Magdalena Mulet
P2860cites workPyrosequencing enumerates and contrasts soil microbial diversityQ24616826
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Microbial diversity in the deep sea and the underexplored "rare biosphere"Q24685531
Genotype versus phenotype in the circumscription of bacterial species: the case of Pseudomonas stutzeri and Pseudomonas chloritidismutans.Q31021477
A detailed phenotypic and genotypic description of Pseudomonas strain OX1.Q31024351
Global Pseudomonas aeruginosa biodiversity as reflected in a Belgian riverQ33216771
PCR-induced sequence artifacts and bias: insights from comparison of two 16S rRNA clone libraries constructed from the same sample.Q33228737
Molecular approaches: advantages and artifacts in assessing bacterial diversityQ33283537
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A highly selective PCR protocol for detecting 16S rRNA genes of the genus Pseudomonas (sensu stricto) in environmental samplesQ33715161
Pseudomonas diversity in crude-oil-contaminated intertidal sand samples obtained after the Prestige oil spillQ33763283
PCR biases distort bacterial and archaeal community structure in pyrosequencing datasetsQ34384736
Quality control in multi-tag pyrosequencing of microbial communitiesQ34507642
Evaluation of oprI and oprL genes as molecular markers for the genus Pseudomonas and their use in studying the biodiversity of a small Belgian River.Q34514498
Investigating the diversity of pseudomonas spp. in soil using culture dependent and independent techniquesQ34724780
Whole-cell MALDI-TOF mass spectrometry and multilocus sequence analysis in the discrimination of Pseudomonas stutzeri populations: three novel genomovarsQ34754698
Diversity of Microbial Communities in Production and Injection Waters of Algerian Oilfields Revealed by 16S rRNA Gene Amplicon 454 PyrosequencingQ34785441
Diversity and abundance of phyllosphere bacteria are linked to insect herbivory.Q35079478
Pseudomonas genomes: diverse and adaptableQ37848453
LPSN--list of prokaryotic names with standing in nomenclatureQ38492580
Comparative genetic diversity of Pseudomonas stutzeri genomovars, clonal structure, and phylogeny of the species.Q39249128
Polyphasic characterization of Pseudomonas stutzeri CLN100 which simultaneously degrades chloro- and methylaromatics: a new genomovar within the species.Q44608149
DNA sequence-based analysis of the Pseudomonas speciesQ44668861
Phylogenetic analysis and siderotyping as useful tools in the taxonomy of Pseudomonas stutzeri: description of a novel genomovarQ45318747
Diversity of Pseudomonas strains isolated with King's B and Gould's S1 agar determined by repetitive extragenic palindromic-polymerase chain reaction, 16S rDNA sequencing and Fourier transform infrared spectroscopy characterisationQ47968899
An rpoD-based PCR procedure for the identification of Pseudomonas species and for their detection in environmental samples.Q51779388
P433issue15
P407language of work or nameEnglishQ1860
P921main subjectpyrosequencingQ2342248
P304page(s)4738-4744
P577publication date2014-08-01
P1433published inApplied and Environmental MicrobiologyQ4781593
P1476titlerpoD gene pyrosequencing for the assessment of Pseudomonas diversity in a water sample from the Woluwe River
P478volume80

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cites work (P2860)
Q58729028-Specific NGS Assay Provides Insight Into Abundance and Dynamics of Species Including in a Cooling Tower
Q50480844High temporal variability in airborne bacterial diversity and abundance inside single-family residences.
Q31136931Uncommonly isolated clinical Pseudomonas: identification and phylogenetic assignation.

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