Physical basis of the inducer-dependent cooperativity of the Central glycolytic genes Repressor/DNA complex

scientific article

Physical basis of the inducer-dependent cooperativity of the Central glycolytic genes Repressor/DNA complex is …
instance of (P31):
scholarly articleQ13442814

External links are
P356DOI10.1093/NAR/GKQ334
P932PMC publication ID2943609
P698PubMed publication ID20462860
P5875ResearchGate publication ID44592474

P50authorAlain Van DorsselaerQ28320673
P2093author name stringCatherine A Royer
Cedric Atmanene
Denis Chaix
Matthew L Ferguson
Nathalie Declerck
Sarah Sanglier-Cianférani
P2860cites workGlobal rigid body modeling of macromolecular complexes against small-angle scattering dataQ24538734
Quaternary structures of tumor suppressor p53 and a specific p53 DNA complexQ24681633
Methyl groups of thymine bases are important for nucleic acid recognition by DtxRQ27626669
Structural basis for cooperative DNA binding by two dimers of the multidrug-binding protein QacRQ27638092
Crystal structure of Thermus thermophilus tRNA m1A58 methyltransferase and biophysical characterization of its interaction with tRNAQ27649825
Structure and function of the arginine repressor-operator complex from Bacillus subtilisQ27650523
Crystal structures of the effector-binding domain of repressor Central glycolytic gene Regulator fromBacillus subtilisreveal ligand-induced structural changes upon binding of several glycolytic intermediatesQ27650835
Structural analysis of the genetic switch that regulates the expression of restriction-modification genesQ27651284
Crystal structure of glutamine receptor protein from Sulfolobus tokodaii strain 7 in complex with its effector L-glutamine: implications of effector binding in molecular association and DNA bindingQ27651337
Crystal structure of the full-length sorbitol operon regulator SorC from Klebsiella pneumoniae: structural evidence for a novel transcriptional regulation mechanismQ27653868
Structural insights into the cooperative binding of SeqA to a tandem GATC repeatQ27654234
An integrative approach combining noncovalent mass spectrometry, enzyme kinetics and X-ray crystallography to decipher Tgt protein-protein and protein-RNA interactionQ27656669
High resolution crystal structure of a paired (Pax) class cooperative homeodomain dimer on DNAQ27729897
Nondenaturing mass spectrometry to study noncovalent protein/protein and protein/ligand complexes: technical aspects and application to the determination of binding stoichiometries.Q52587815
Linked equilibria in regulation of transcription initiation.Q54432091
Positive and negative regulation of expression of the L-sorbose (sor) operon by SorC in Klebsiella pneumoniae.Q54706318
Probing the physical basis for trp repressor-operator recognitionQ57710411
The OR control system of bacteriophage lambda. A physical-chemical model for gene regulationQ67280366
ViTO: tool for refinement of protein sequence-structure alignmentsQ80375178
Two glyceraldehyde-3-phosphate dehydrogenases with opposite physiological roles in a nonphotosynthetic bacteriumQ28489056
Carbon catabolite repression in bacteria: many ways to make the most out of nutrientsQ29615329
Calculation of hydrodynamic properties of globular proteins from their atomic-level structureQ29620591
@TOME-2: a new pipeline for comparative modeling of protein-ligand complexes.Q30377093
Low resolution structural models of the basic helix-loop-helix leucine zipper domain of upstream stimulatory factor 1 and its complexes with DNA from small angle X-ray scattering dataQ31126701
Na(+) and K(+) allosterically regulate cooperative DNA binding by the human progesterone receptorQ33598833
Regulation of carbon catabolism in Bacillus species.Q34052788
Advances in structure analysis using small-angle scattering in solutionQ34162462
Small-angle scattering: a view on the properties, structures and structural changes of biological macromolecules in solutionQ34285146
Contributions of mass spectrometry in the study of nucleic acid-binding proteins and of nucleic acid-protein interactionsQ35088427
Inducer-modulated cooperative binding of the tetrameric CggR repressor to operator DNAQ35751393
Single-molecule spectroscopic methodsQ35909470
Solution structures of 2 : 1 and 1 : 1 DNA polymerase-DNA complexes probed by ultracentrifugation and small-angle X-ray scatteringQ36457191
Structure of tumor suppressor p53 and its intrinsically disordered N-terminal transactivation domain.Q36558058
Dual-color fluorescence cross-correlation spectroscopy for multicomponent diffusional analysis in solutionQ36851801
Analysis of X-ray and neutron scattering from biomacromolecular solutionsQ36917327
Characterization of the control catabolite protein of gluconeogenic genes repressor by fluorescence cross-correlation spectroscopy and other biophysical approachesQ36938725
Investigating transcriptional regulation by fluorescence spectroscopy, from traditional methods to state-of-the-art single-molecule approachesQ37205529
Structural and biophysical characterization of the proteins interacting with the herpes simplex virus 1 origin of replicationQ37269225
Carbon catabolite control of the metabolic network in Bacillus subtilisQ37388331
Identification and characterization of a DeoR-specific operator sequence essential for induction of dra-nupC-pdp operon expression in Bacillus subtilisQ39494619
Purification and characterization of the DeoR repressor of Bacillus subtilisQ39538615
Dra-nupC-pdp operon of Bacillus subtilis: nucleotide sequence, induction by deoxyribonucleosides, and transcriptional regulation by the deoR-encoded DeoR repressor proteinQ39839920
Expression of the glycolytic gapA operon in Bacillus subtilis: differential syntheses of proteins encoded by the operon.Q42594926
Combination of noncovalent mass spectrometry and traveling wave ion mobility spectrometry reveals sugar-induced conformational changes of central glycolytic genes repressor/DNA complexQ43111094
Transcription of glycolytic genes and operons in Bacillus subtilis: evidence for the presence of multiple levels of control of the gapA operonQ43698188
Control of the glycolytic gapA operon by the catabolite control protein A in Bacillus subtilis: a novel mechanism of CcpA-mediated regulationQ44068006
Regulation of the central glycolytic genes in Bacillus subtilis: binding of the repressor CggR to its single DNA target sequence is modulated by fructose-1,6-bisphosphateQ44352779
Role of protein-protein bridging interactions on cooperative assembly of DNA-bound CRP-CytR-CRP complex and regulation of the Escherichia coli CytR regulon.Q44384197
Structure of an OhrR-ohrA operator complex reveals the DNA binding mechanism of the MarR familyQ46739652
A phospho-sugar binding domain homologous to NagB enzymes regulates the activity of the central glycolytic genes repressor.Q46814775
Fructose-1,6-bisphosphate acts both as an inducer and as a structural cofactor of the central glycolytic genes repressor (CggR).Q46872043
P275copyright licenseCreative Commons Attribution-NonCommercial 2.5 GenericQ19113746
P6216copyright statuscopyrightedQ50423863
P433issue17
P407language of work or nameEnglishQ1860
P304page(s)5944-5957
P577publication date2010-05-12
P1433published inNucleic Acids ResearchQ135122
P1476titlePhysical basis of the inducer-dependent cooperativity of the Central glycolytic genes Repressor/DNA complex
P478volume38

Reverse relations

cites work (P2860)
Q92305717Measuring glycolytic flux in single yeast cells with an orthogonal synthetic biosensor
Q42877353Minimal genetic device with multiple tunable functions
Q35657684Reconciling molecular regulatory mechanisms with noise patterns of bacterial metabolic promoters in induced and repressed states.
Q26826822The emerging role of native mass spectrometry in characterizing the structure and dynamics of macromolecular complexes

Search more.