| scholarly article | Q13442814 |
| P6179 | Dimensions Publication ID | 1035045975 |
| P356 | DOI | 10.1038/ISMEJ.2012.1 |
| P932 | PMC publication ID | 3400405 |
| P698 | PubMed publication ID | 22297557 |
| P5875 | ResearchGate publication ID | 221798593 |
| P50 | author | Torsten Thomas | Q88510033 |
| Staffan Kjelleberg | Q38361689 | ||
| P2093 | author name string | Ling Zhong | |
| Lu Fan | |||
| Michael Liu | |||
| P2860 | cites work | Isolation of 2,6-dibromophenol from the marine hemichordate, Balanoglossus biminiensis | Q72210289 |
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| Genus-specific associations of marine sponges with group I crenarchaeotes | Q99952795 | ||
| (7E, 13ξ, 15Z)-14,16-dibromo-7,13,15-hexadecatrien-5-ynoic acid. A novel dibromo acetylenic acid from the marine sponge Xestospongia muta | Q105284333 | ||
| Metaproteomics provides functional insight into activated sludge wastewater treatment | Q21144335 | ||
| The COG database: an updated version includes eukaryotes | Q21284294 | ||
| Nitrosopumilus maritimus genome reveals unique mechanisms for nitrification and autotrophy in globally distributed marine crenarchaea | Q22066310 | ||
| The genome of the obligately intracellular bacterium Ehrlichia canis reveals themes of complex membrane structure and immune evasion strategies | Q24548624 | ||
| Transport of C(4)-dicarboxylates in Wolinella succinogenes | Q24548965 | ||
| The Yersinia adhesin YadA collagen-binding domain structure is a novel left-handed parallel beta-roll | Q24605244 | ||
| CDD: a Conserved Domain Database for the functional annotation of proteins | Q24610576 | ||
| The Pfam protein families database | Q24644670 | ||
| TRAP transporters: a new family of periplasmic solute transport systems encoded by the dctPQM genes of Rhodobacter capsulatus and by homologs in diverse gram-negative bacteria | Q24677284 | ||
| The subsystems approach to genome annotation and its use in the project to annotate 1000 genomes | Q24817116 | ||
| Involvement of coenzyme A esters and two new enzymes, an enoyl-CoA hydratase and a CoA-transferase, in the hydration of crotonobetaine to L-carnitine by Escherichia coli | Q28215910 | ||
| Occurrence of fatty acid chlorohydrins in jellyfish lipids | Q28316820 | ||
| Sponge-associated microorganisms: evolution, ecology, and biotechnological potential | Q28757510 | ||
| Changes in protein synthesis and identification of proteins specifically induced during solventogenesis in Clostridium acetobutylicum | Q30805401 | ||
| Nitratireductor aquibiodomus gen. nov., sp. nov., a novel alpha-proteobacterium from the marine denitrification system of the Montreal Biodome (Canada). | Q30890444 | ||
| Phyllobacterium catacumbae sp. nov., a member of the order 'Rhizobiales' isolated from Roman catacombs | Q30994081 | ||
| Emended description of the genus Phyllobacterium and description of four novel species associated with plant roots: Phyllobacterium bourgognense sp. nov., Phyllobacterium ifriqiyense sp. nov., Phyllobacterium leguminum sp. nov. and [...] | Q31035878 | ||
| The importance of culturing bacterioplankton in the 'omics' age. | Q31127992 | ||
| Bacterial community associated with Pfiesteria-like dinoflagellate cultures. | Q31938650 | ||
| Unique microbial signatures of the alien Hawaiian marine sponge Suberites zeteki | Q33293106 | ||
| Temperature thresholds for bacterial symbiosis with a sponge | Q33334820 | ||
| Complex nitrogen cycling in the sponge Geodia barretti | Q33447804 | ||
| Diversity of aerobic and anaerobic ammonia-oxidizing bacteria in marine sponges | Q33484146 | ||
| Distribution, expression, and motif variability of ankyrin domain genes in Wolbachia pipientis | Q33937299 | ||
| Methionine sulfoxide reductases in prokaryotes | Q33984670 | ||
| Tripartite ATP-independent periplasmic (TRAP) transporters in bacteria and archaea | Q34123099 | ||
| SAR11 clade dominates ocean surface bacterioplankton communities. | Q34165899 | ||
| Bacterial glutathione S-transferases: what are they good for? | Q34417495 | ||
| Peroxiredoxins | Q34523483 | ||
| The structural biochemistry of the superoxide dismutases. | Q34993111 | ||
| Proteome insights into the symbiotic relationship between a captive colony of Nasutitermes corniger and its hindgut microbiome | Q35018591 | ||
| Functional genomic analysis of an uncultured δ-proteobacterium in the sponge Cymbastela concentrica | Q35018697 | ||
| Environmental proteomics of microbial plankton in a highly productive coastal upwelling system | Q35018884 | ||
| Current-induced flow through living sponges in nature | Q35027614 | ||
| The housekeeping dipeptide permease is the Escherichia coli heme transporter and functions with two optional peptide binding proteins | Q35036520 | ||
| Repression of 4-hydroxybenzoate transport and degradation by benzoate: a new layer of regulatory control in the Pseudomonas putida beta-ketoadipate pathway | Q35599681 | ||
| Identification and characterization of dppA, an Escherichia coli gene encoding a periplasmic dipeptide transport protein | Q36128509 | ||
| New substrates for TonB-dependent transport: do we only see the 'tip of the iceberg'? | Q37186239 | ||
| The Coxiella burnetii ankyrin repeat domain-containing protein family is heterogeneous, with C-terminal truncations that influence Dot/Icm-mediated secretion | Q37232712 | ||
| The genomic basis of trophic strategy in marine bacteria | Q37337800 | ||
| Evidence of nitrification and denitrification in high and low microbial abundance sponges | Q37414485 | ||
| Marine sponges and their microbial symbionts: love and other relationships | Q37858656 | ||
| Binding protein-dependent ABC transport system for glycerol 3-phosphate of Escherichia coli | Q38334252 | ||
| Exploration of the normal human bronchoalveolar lavage fluid proteome | Q38514151 | ||
| Functional genomic signatures of sponge bacteria reveal unique and shared features of symbiosis | Q39283190 | ||
| The fixA and fixB genes are necessary for anaerobic carnitine reduction in Escherichia coli | Q39679703 | ||
| The pho regulon-dependent Ugp uptake system for glycerol-3-phosphate in Escherichia coli is trans inhibited by Pi. | Q39929966 | ||
| Choline-glycine betaine pathway confers a high level of osmotic tolerance in Escherichia coli | Q39965015 | ||
| Role for the Ankyrin eukaryotic-like genes of Legionella pneumophila in parasitism of protozoan hosts and human macrophages | Q40012620 | ||
| Secondary solute transport in bacteria | Q40859221 | ||
| Bacterial carnitine metabolism | Q41351461 | ||
| Oxygen dynamics and transport in the Mediterranean sponge Aplysina aerophoba | Q42088196 | ||
| Phymm and PhymmBL: metagenomic phylogenetic classification with interpolated Markov models | Q42584806 | ||
| Comparative metaproteomics reveals ocean-scale shifts in microbial nutrient utilization and energy transduction | Q43529627 | ||
| Transport functions dominate the SAR11 metaproteome at low-nutrient extremes in the Sargasso Sea. | Q43529777 | ||
| Spongiadioxins A and B, two new polybrominated dibenzo-p-dioxins from an Australian marine sponge Dysidea dendyi. | Q43659387 | ||
| Identity and potential functions of heterotrophic bacterial isolates from a continuous-upflow fixed-bed reactor for denitrification of drinking water with bacterial polyester as source of carbon and electron donor | Q43716704 | ||
| Physiology, phylogeny and in situ evidence for bacterial and archaeal nitrifiers in the marine sponge Aplysina aerophoba. | Q45611929 | ||
| Community proteomics of a natural microbial biofilm | Q46632593 | ||
| Genetic structure and functional implication of the fcb gene cluster for hydrolytic dechlorination of 4-chlorobenzoate from Pseudomonas sp. DJ-12. | Q47809009 | ||
| Metaproteogenomic analysis of a dominant green sulfur bacterium from Ace Lake, Antarctica. | Q50559687 | ||
| Anaerobic ammonia oxidation with nitrogen dioxide by Nitrosomonas eutropha. | Q51548447 | ||
| The diversity of naturally occurring organobromine compounds | Q55866406 | ||
| What do we really know about sponge-microbial symbioses? | Q57901841 | ||
| P433 | issue | 8 | |
| P304 | page(s) | 1515-1525 | |
| P577 | publication date | 2012-02-02 | |
| P1433 | published in | The ISME Journal | Q7741240 |
| P1476 | title | Metaproteogenomic analysis of a community of sponge symbionts | |
| P478 | volume | 6 |
| Q47690631 | Ankyrin-repeat proteins from sponge symbionts modulate amoebal phagocytosis |
| Q41236668 | Bacterial community composition and predicted functional ecology of sponges, sediment and seawater from the thousand islands reef complex, West Java, Indonesia. |
| Q34691984 | Bioinformatic progress and applications in metaproteogenomics for bridging the gap between genomic sequences and metabolic functions in microbial communities |
| Q90084039 | Changes in the metabolic potential of the sponge microbiome under ocean acidification |
| Q93013162 | Characterization of a sponge microbiome using an integrative genome-centric approach |
| Q91604469 | Characterization of a thaumarchaeal symbiont that drives incomplete nitrification in the tropical sponge Ianthella basta |
| Q92601408 | Comparative Genomics Reveals Ecological and Evolutionary Insights into Sponge-Associated Thaumarchaeota |
| Q94545240 | Compositional and Quantitative Insights Into Bacterial and Archaeal Communities of South Pacific Deep-Sea Sponges (Demospongiae and Hexactinellida) |
| Q57900833 | Draft Genomes Shed Light on the Dual Bacterial Symbiosis that Dominates the Microbiome of the Coral Reef Sponge Amphimedon queenslandica |
| Q47702196 | Ecological patterns and adaptability of bacterial communities in alkaline copper mine drainage |
| Q34531498 | Effects of sample handling and cultivation bias on the specificity of bacterial communities in keratose marine sponges |
| Q37528805 | Emerging Sponge Models of Animal-Microbe Symbioses |
| Q26741421 | Environmental Microbial Community Proteomics: Status, Challenges and Perspectives |
| Q46499481 | Evolution and function of eukaryotic-like proteins from sponge symbionts |
| Q58797836 | Expressed protein profile of a Tectomicrobium and other microbial symbionts in the marine sponge Aplysina aerophoba as evidenced by metaproteomics |
| Q48106212 | Expression of eukaryotic-like protein in the microbiome of sponges |
| Q91063379 | Fueled by methane: deep-sea sponges from asphalt seeps gain their nutrition from methane-oxidizing symbionts |
| Q50103995 | Functional Transcripts Indicate Phylogenetically Diverse Active Ammonia-Scavenging Microbiota in Sympatric Sponges. |
| Q34281598 | Functional equivalence and evolutionary convergence in complex communities of microbial sponge symbionts |
| Q34355776 | Genomic insights into the marine sponge microbiome |
| Q54978864 | Genus-wide comparison of Pseudovibrio bacterial genomes reveal diverse adaptations to different marine invertebrate hosts. |
| Q35334757 | GeoChip-based insights into the microbial functional gene repertoire of marine sponges (high microbial abundance, low microbial abundance) and seawater |
| Q36388106 | Host-specific assembly of sponge-associated prokaryotes at high taxonomic ranks |
| Q38879767 | Integrated metabolism in sponge-microbe symbiosis revealed by genome-centered metatranscriptomics |
| Q35117774 | Integration of culture-based and molecular analysis of a complex sponge-associated bacterial community |
| Q57335052 | Introduction to the Global Scenario of Marine Sponge Research |
| Q64064132 | Life at Home and on the Roam: Genomic Adaptions Reflect the Dual Lifestyle of an Intracellular, Facultative Symbiont |
| Q35676300 | Lifestyle evolution in cyanobacterial symbionts of sponges |
| Q57039218 | Lights and shadows: growth patterns in three sympatric and congeneric sponges (Ircinia spp.) with contrasting abundances of photosymbionts |
| Q60933560 | Marine Sponges as Hot Spots: Genomic Insights and High-Resolution Visualization of an Abundant and Diverse Symbiotic Clade |
| Q30584195 | Marine microbial symbiosis heats up: the phylogenetic and functional response of a sponge holobiont to thermal stress |
| Q37736522 | Metabolic profiles of prokaryotic and eukaryotic communities in deep-sea sponge Neamphius huxleyi [corrected]. indicated by metagenomics |
| Q36183934 | Metagenomic Analysis of Genes Encoding Nutrient Cycling Pathways in the Microbiota of Deep-Sea and Shallow-Water Sponges |
| Q46946256 | Metaproteomic survey of six aquatic habitats: discovering the identities of microbial populations active in biogeochemical cycling |
| Q40587878 | Metaproteomics reveals metabolic transitions between healthy and diseased stony coral Mussismilia braziliensis |
| Q52353466 | Microbial and Functional Biodiversity Patterns in Sponges that Accumulate Bromopyrrole Alkaloids Suggest Horizontal Gene Transfer of Halogenase Genes. |
| Q28654342 | Microbial communities and bioactive compounds in marine sponges of the family irciniidae-a review |
| Q57901754 | Microbial indicators as a diagnostic tool for assessing water quality and climate stress in coral reef ecosystems |
| Q30911195 | Navigating through metaproteomics data: a logbook of database searching |
| Q47446186 | Phylogeny and genomics of SAUL, an enigmatic bacterial lineage frequently associated with marine sponges. |
| Q35601238 | Potential metabolic strategies of widely distributed holobionts in the oceanic archipelago of St Peter and St Paul (Brazil). |
| Q36850146 | Proteomic Stable Isotope Probing Reveals Biosynthesis Dynamics of Slow Growing Methane Based Microbial Communities |
| Q34326661 | Reconstruction of ribosomal RNA genes from metagenomic data |
| Q35185815 | Revealing microbial functional activities in the Red Sea sponge Stylissa carteri by metatranscriptomics |
| Q28602380 | Sample Processing Impacts the Viability and Cultivability of the Sponge Microbiome |
| Q28661523 | Single-cell genomics reveals complex carbohydrate degradation patterns in poribacterial symbionts of marine sponges |
| Q34376706 | Stability of sponge-associated bacteria over large seasonal shifts in temperature and irradiance. |
| Q57901149 | The Holo-Transcriptome of a Calcified Early Branching Metazoan |
| Q28821848 | The Microbiome and Occurrence of Methanotrophy in Carnivorous Sponges |
| Q26751163 | The Sponge Hologenome |
| Q51148493 | The sponge holobiont in a changing ocean: from microbes to ecosystems. |
| Q40372125 | Whole Genome Sequencing of the Symbiont Pseudovibrio sp. from the Intertidal Marine Sponge Polymastia penicillus Revealed a Gene Repertoire for Host-Switching Permissive Lifestyle. |
| Q61798692 | Whole-Genome Comparisons Among the Genus Shewanella Reveal the Enrichment of Genes Encoding Ankyrin-Repeats Containing Proteins in Sponge-Associated Bacteria |
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