| scholarly article | Q13442814 |
| P2093 | author name string | S C Alley | |
| B H Robinson | |||
| P B Hopkins | |||
| A W Reese | |||
| T M Okonogi | |||
| P2860 | cites work | Crystal structure of the nucleosome core particle at 2.8 A resolution | Q22122355 |
| Crystal structure of double-stranded DNA containing the major adduct of the anticancer drug cisplatin | Q27729671 | ||
| Importance of a flanking AT-rich region in target site recognition by the GC box-binding zinc finger protein MIG1. | Q27939922 | ||
| Crystal structure of a CAP-DNA complex: the DNA is bent by 90 degrees | Q28301788 | ||
| Phosphate backbone neutralization increases duplex DNA flexibility: a model for protein binding | Q34046682 | ||
| Flexibility of duplex DNA on the submicrosecond timescale | Q34172043 | ||
| Sequence-dependent dynamics in duplex DNA. | Q34173098 | ||
| DNA flexibility variation may dominate DNase I cleavage | Q34322726 | ||
| Kinetics of branch migration in double-stranded DNA | Q35009248 | ||
| Localized DNA flexibility contributes to target site selection by DNA-bending proteins. | Q38355415 | ||
| Flexibility of DNA. | Q39653493 | ||
| The effects of sequence context on base dynamics at TpA steps in DNA studied by NMR. | Q40396166 | ||
| Evidence for opposite groove-directed curvature of GGGCCC and AAAAA sequence elements | Q40405528 | ||
| Site-Specific Dynamics in DNA: Theory | Q40476027 | ||
| New concepts in protein-DNA recognition: sequence-directed DNA bending and flexibility. | Q40663889 | ||
| Architectural transcription factors | Q40750100 | ||
| Sequence motifs and free energies of selected natural and non-natural nucleosome positioning DNA sequences. | Q40813511 | ||
| Importance of DNA stiffness in protein-DNA binding specificity | Q41461639 | ||
| Eukaryotic transcription factor-DNA complexes. | Q41548968 | ||
| CTG repeats associated with human genetic disease are inherently flexible | Q41702571 | ||
| Biological implications of the DNA structures associated with disease-causing triplet repeats | Q41844296 | ||
| The main role of the sequence-dependent DNA elasticity in determining the free energy of nucleosome formation on telomeric DNAs | Q42057290 | ||
| Dependence of the torsional rigidity of DNA on base composition | Q45309968 | ||
| Evidence for kinks in DNA folding in the nucleosome. | Q50901499 | ||
| Acetylated histones are associated with FMR1 in normal but not fragile X-syndrome cells. | Q51984888 | ||
| Translational positioning of nucleosomes on DNA: the role of sequence-dependent isotropic DNA bending stiffness. | Q52344458 | ||
| Monitoring DNA dynamics using spin-labels with different independent mobilities. | Q52344577 | ||
| Site-specific dynamics in DNA: theory and experiment. | Q52357194 | ||
| Motions of short DNA duplexes: an analysis of DNA dynamics using an EPR-active probe. | Q52400665 | ||
| Flexible DNA: genetically unstable CTG.CAG and CGG.CCG from human hereditary neuromuscular disease genes. | Q54261799 | ||
| Structure of the nucleosome core particle at 7 Å resolution | Q56337256 | ||
| Intermediate species possessing bent DNA are present along the pathway to formation of a final TBP-TATA complex | Q64381448 | ||
| Nucleosome reconstitution of core-length poly(dG).poly(dC) and poly(rG-dC).poly(rG-dC) | Q69596865 | ||
| Bending and torsional flexibility of G/C-rich sequences as determined by cyclization assays | Q70808637 | ||
| Estrogen receptor affinity and location of consensus and imperfect estrogen response elements influence transcription activation of simplified promoters | Q71454170 | ||
| Dynamics and structures of DNA: long-range effects of a 16 base-pair (CG)8 sequence on secondary structure | Q72610314 | ||
| Frequency of deletion formation decreases exponentially with distance between short direct repeats | Q72738303 | ||
| Nucleosome structural features and intrinsic properties of the TATAAACGCC repeat sequence | Q73133695 | ||
| Sequence and position-dependence of the equilibrium accessibility of nucleosomal DNA target sites | Q73472047 | ||
| The dynamic impact of CpG methylation in DNA | Q73685322 | ||
| NMR evidence for base dynamics at all TpA steps in DNA | Q74191454 | ||
| The distribution of end-to-end distances of the weakly bending rod model | Q74308344 | ||
| The question of long-range allosteric transitions in DNA | Q74561254 | ||
| Dual role of DNA intrinsic curvature and flexibility in determining nucleosome stability | Q74579910 | ||
| Trinucleotide repeat DNA structures: dynamic mutations from dynamic DNA | Q74782097 | ||
| P433 | issue | 6 | |
| P407 | language of work or name | English | Q1860 |
| P304 | page(s) | 3446-3459 | |
| P577 | publication date | 2002-12-01 | |
| P1433 | published in | Biophysical Journal | Q2032955 |
| P1476 | title | Sequence-dependent dynamics of duplex DNA: the applicability of a dinucleotide model | |
| P478 | volume | 83 |
| Q38288160 | 31P NMR investigation of backbone dynamics in DNA binding sites |
| Q52946365 | Alignment of extremely long single polymer chains by exploiting hydrodynamic flow. |
| Q34143686 | Base Sequence Context Effects on Nucleotide Excision Repair |
| Q39226332 | Computation of nitroxide-nitroxide distances in spin-labeled DNA duplexes |
| Q34183456 | DNA Basepair Step Deformability Inferred from Molecular Dynamics Simulations |
| Q41835848 | DNA bending propensity in the presence of base mismatches: implications for DNA repair. |
| Q34071376 | Distant neighbor base sequence context effects in human nucleotide excision repair of a benzo[a]pyrene-derived DNA lesion |
| Q42244805 | Effect of Bending Rigidity on the Knotting of a Polymer under Tension. |
| Q57187663 | Fine mapping of inherent flexibility variation along DNA molecules: validation by atomic force microscopy (AFM) in buffer |
| Q35548985 | In vitro selection of DNAs with an increased propensity to form small circles |
| Q34684612 | Indirect readout of DNA sequence at the primary-kink site in the CAP-DNA complex: recognition of pyrimidine-purine and purine-purine steps |
| Q33821647 | Investigating local conformations of double-stranded DNA by low-energy circular dichroism of pyrrolo-cytosine |
| Q41299060 | Local and global effects of strong DNA bending induced during molecular dynamics simulations |
| Q34352331 | Molecular dynamics simulations of the 136 unique tetranucleotide sequences of DNA oligonucleotides. II: sequence context effects on the dynamical structures of the 10 unique dinucleotide steps |
| Q38256987 | Molecular mechanisms of adaptation emerging from the physics and evolution of nucleic acids and proteins. |
| Q41890803 | Probing sequence-specific DNA flexibility in a-tracts and pyrimidine-purine steps by nuclear magnetic resonance (13)C relaxation and molecular dynamics simulations. |
| Q36935432 | Rigid spin-labeled nucleoside C: a nonperturbing EPR probe of nucleic acid conformation. |
| Q34100335 | Sequence dependence of DNA bending rigidity |
| Q30471598 | Sequence-specific ultrasonic cleavage of DNA |
| Q51555798 | Simulating electron spin resonance spectra of macromolecules labeled with two dipolar-coupled nitroxide spin labels from trajectories. |
| Q37301678 | Site-directed spin labeling studies on nucleic acid structure and dynamics |
| Q40606284 | The relative flexibility of B-DNA and A-RNA duplexes: database analysis |
| Q35128986 | Torsional rigidities of weakly strained DNAs. |
| Q34510040 | μABC: a systematic microsecond molecular dynamics study of tetranucleotide sequence effects in B-DNA |
| Q64979164 | σI from Bacillus subtilis: Impact on Gene Expression and Characterization of σI-Dependent Transcription That Requires New Types of Promoters with Extended -35 and -10 Elements. |
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