Genome‐wide association genetics of an adaptive trait in lodgepole pine

scientific article published on March 8, 2012

Genome‐wide association genetics of an adaptive trait in lodgepole pine is …
instance of (P31):
scholarly articleQ13442814

External links are
P356DOI10.1111/J.1365-294X.2012.05513.X
P953full work available online athttps://api.wiley.com/onlinelibrary/tdm/v1/articles/10.1111%2Fj.1365-294X.2012.05513.x
https://onlinelibrary.wiley.com/doi/pdf/10.1111/j.1365-294X.2012.05513.x
P698PubMed publication ID22404645
P5875ResearchGate publication ID221690705

P50authorThomas L. ParchmanQ57957887
Zachariah GompertQ88036570
Craig W. BenkmanQ91040043
P2093author name stringJoann Mudge
C. Alex Buerkle
Faye D. Schilkey
P2860cites workPopulation genomics of parallel adaptation in threespine stickleback using sequenced RAD tagsQ21563319
Genome-wide association studies for complex traits: consensus, uncertainty and challengesQ24550632
AFLP: a new technique for DNA fingerprintingQ24620887
Genes mirror geography within EuropeQ24644872
A method for quantifying differentiation between populations at multi-allelic loci and its implications for investigating identity and paternityQ28293124
Evolution of genome size and complexity in PinusQ28755665
Multilocus patterns of nucleotide diversity, linkage disequilibrium and demographic history of Norway spruce [Picea abies (L.) Karst]Q28764738
Worldwide human relationships inferred from genome-wide patterns of variationQ29547228
Detecting the number of clusters of individuals using the software STRUCTURE: a simulation studyQ29547289
Illumina sequencing library preparation for highly multiplexed target capture and sequencingQ29614704
Genome-wide association studies for common diseases and complex traitsQ29615822
A robust, simple genotyping-by-sequencing (GBS) approach for high diversity speciesQ29616249
Effects of fire on landscape heterogeneity in Yellowstone National Park, WyomingQ30039599
How much of the variation in adaptive divergence can be explained by gene flow? An evaluation using lake-stream stickleback pairsQ31131897
A genealogical interpretation of principal components analysisQ33510917
Transcriptome sequencing in an ecologically important tree species: assembly, annotation, and marker discoveryQ33541331
Multiplexed shotgun genotyping for rapid and efficient genetic mappingQ33793060
Forest tree genomics: growing resources and applicationsQ33796436
Linkage mapping and comparative genomics using next-generation RAD sequencing of a non-model organismQ33889299
Assessing population differentiation and isolation from single-nucleotide polymorphism dataQ57259383
Estimating gene flow in island populationsQ57868237
Anatomic basis and insulation of serotinous cones in Pinus halepensis MillQ59204053
Surprises and lessons from the 1988 Yellowstone firesQ59448274
Life histories of Mediterranean pinesQ60523939
Reciprocal selection causes a coevolutionary arms race between crossbills and lodgepole pineQ73664413
Thirty-five polymorphic microsatellite markers for rainbow trout (Oncorhynchus mykiss)Q77085452
Biogeography of lodgepole pineQ113778855
Estimation of population structure in coastal Douglas-fir [Pseudotsuga menziesii (Mirb.) Franco var. menziesii] using allozyme and microsatellite markersQ126067006
Genes to ecosystems: exploring the frontiers of ecology with one of the smallest biological unitsQ33918907
Exome-wide DNA capture and next generation sequencing in domestic and wild speciesQ33951074
Patterns of population structure and environmental associations to aridity across the range of loblolly pine (Pinus taeda L., Pinaceae).Q34007966
Direct measurement of the transfer rate of chloroplast DNA into the nucleusQ34178413
Additional SNPs and linkage-disequilibrium analyses are necessary for whole-genome association studies in humansQ34185525
Association mapping of quantitative disease resistance in a natural population of loblolly pine (Pinus taeda L.).Q34196380
Ascertainment bias in studies of human genome-wide polymorphism.Q34206539
Ascertainment biases in SNP chips affect measures of population divergenceQ35022967
Tobacco nuclear DNA contains long tracts of homology to chloroplast DNA.Q35033193
Likelihood-based inference for genetic correlation coefficientsQ35104803
Identification of genetic variants using bar-coded multiplexed sequencingQ35208823
Association genetics of carbon isotope discrimination, height and foliar nitrogen in a natural population of Pinus taeda L.Q35227365
Association genetics of complex traits in conifersQ35825070
Linkage disequilibrium and association studies in higher plants: present status and future prospects.Q36094425
Forest-tree population genomics and adaptive evolution.Q36445598
Combining population genomics and quantitative genetics: finding the genes underlying ecologically important traits.Q36741994
Genomics to tree breeding and forest healthQ37024938
Association genetics of coastal Douglas fir (Pseudotsuga menziesii var. menziesii, Pinaceae). I. Cold-hardiness related traitsQ37310331
Multilocus patterns of nucleotide diversity and divergence reveal positive selection at candidate genes related to cold hardiness in coastal Douglas Fir (Pseudotsuga menziesii var. menziesii).Q37351815
Nucleotide diversity and linkage disequilibrium in loblolly pineQ37589494
Sequencing breakthroughs for genomic ecology and evolutionary biologyQ37876496
Interpreting principal component analyses of spatial population genetic variationQ38790438
Association genetics in Pinus taeda L. I. Wood property traits.Q39028057
Complexity reduction of polymorphic sequences (CRoPS): a novel approach for large-scale polymorphism discovery in complex genomesQ39240453
A unified mixed-model method for association mapping that accounts for multiple levels of relatednessQ39513162
Low levels of population genetic structure in Pinus contorta (Pinaceae) across a geographic mosaic of co‐evolutionQ39746482
Inferences about Linkage DisequilibriumQ41030203
Association genetics in Pinus taeda L. II. Carbon isotope discriminationQ42003123
Bayesian analysis of molecular variance in pyrosequences quantifies population genetic structure across the genome of Lycaeides butterfliesQ42020930
An algorithmic model for constructing a linkage and linkage disequilibrium map in outcrossing plant populationsQ42612458
Nucleotide diversity and linkage disequilibrium in cold-hardiness- and wood quality-related candidate genes in Douglas fir.Q42714863
Evolution of genome size in pines (Pinus) and its life-history correlates: supertree analysesQ46321351
Glacial vicariance in the Pacific Northwest: evidence from a lodgepole pine mitochondrial DNA minisatellite for multiple genetically distinct and widely separated refugiaQ47282055
Characterization of microsatellite and minisatellite loci in Atlantic salmon (Salmo salar L.) and cross-species amplification in other salmonidsQ47806235
SEROTINY, GEOGRAPHY, AND FIRE IN THE PINE BARRENS OF NEW JERSEY.Q47959819
Genome sequencing of a 239-kb region of rice chromosome 10L reveals a high frequency of gene duplication and a large chloroplast DNA insertionQ48283869
Widespread, ecologically relevant genetic markers developed from association mapping of climate-related traits in Sitka spruce (Picea sitchensis).Q51624822
The local introduction of strongly interacting species and the loss of geographic variation in species and species interactionsQ56776254
The influence of a competitor on the geographic mosaic of coevolution between crossbills and lodgepole pineQ57112126
P433issue12
P407language of work or nameEnglishQ1860
P921main subjectmetagenomicsQ903778
genome-wide association studyQ1098876
adaptive traitQ23072093
biological adaptationQ67504163
P304page(s)2991-3005
P577publication date2012-03-08
P1433published inMolecular EcologyQ6895946
P1476titleGenome-wide association genetics of an adaptive trait in lodgepole pine
Genome‐wide association genetics of an adaptive trait in lodgepole pine
P478volume21